Cow genome map
Conread name: | raor023_p21.y1 |
Conread position: | 1-165 |
Cow position: | chr10:39780434-39780265 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 131 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 85, 0 |
Conread position: | 1-165 |
Cow position: | chr10:40425110-40425276 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 124 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 86, 153 |
Conread position: | 1-207 |
Cow position: | chr10:42627881-42628096 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 165 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 1-368 |
Cow position: | chr10:19497529-19497138 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 267 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 84, 374 |
Conread position: | 1-378 |
Cow position: | chr10:28640873-28641276 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 262 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 84, 0 |
Conread position: | 1-380 |
Cow position: | chr10:42735935-42736295 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 270 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 124, 51 |
Conread position: | 1-449 |
Cow position: | chr10:21466639-21467112 (view UCSC Genome Browser custom track) |
Alignm length: | 476 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 84, 240 |
Conread position: | 1-462 |
Cow position: | chr10:4499126-4499578 (view UCSC Genome Browser custom track) |
Alignm length: | 473 |
Alignm identity: | 317 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 39, 32 |
Conread position: | 1-525 |
Cow position: | chr10:49309964-49310467 (view UCSC Genome Browser custom track) |
Alignm length: | 530 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 105 |
Conread position: | 1-544 |
Cow position: | chr10:21901763-21901245 (view UCSC Genome Browser custom track) |
Alignm length: | 553 |
Alignm identity: | 352 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 220, 29 |
Conread position: | 1-558 |
Cow position: | chr10:24299434-24298888 (view UCSC Genome Browser custom track) |
Alignm length: | 564 |
Alignm identity: | 396 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 173 |
Conread position: | 1-558 |
Cow position: | chr10:34685326-34685859 (view UCSC Genome Browser custom track) |
Alignm length: | 561 |
Alignm identity: | 381 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 293, 89 |
Conread position: | 1-558 |
Cow position: | chr10:38546811-38546259 (view UCSC Genome Browser custom track) |
Alignm length: | 569 |
Alignm identity: | 397 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 171 |
Conread position: | 1-558 |
Cow position: | chr10:61296714-61297292 (view UCSC Genome Browser custom track) |
Alignm length: | 585 |
Alignm identity: | 421 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 81 |
Conread position: | 1-562 |
Cow position: | chr10:11686271-11685700 (view UCSC Genome Browser custom track) |
Alignm length: | 584 |
Alignm identity: | 392 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 88, 179 |
Conread position: | 1-562 |
Cow position: | chr10:41566493-41567074 (view UCSC Genome Browser custom track) |
Alignm length: | 591 |
Alignm identity: | 393 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 84, 36 |
Conread position: | 1-562 |
Cow position: | chr10:60489076-60489627 (view UCSC Genome Browser custom track) |
Alignm length: | 571 |
Alignm identity: | 416 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 29 |
Conread position: | 1-563 |
Cow position: | chr10:55092499-55093079 (view UCSC Genome Browser custom track) |
Alignm length: | 585 |
Alignm identity: | 394 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 88, 22 |
Conread position: | 1-564 |
Cow position: | chr10:4192829-4192248 (view UCSC Genome Browser custom track) |
Alignm length: | 592 |
Alignm identity: | 401 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 84, 289 |
Conread position: | 1-564 |
Cow position: | chr10:14803228-14803804 (view UCSC Genome Browser custom track) |
Alignm length: | 588 |
Alignm identity: | 400 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 84, 36 |
Conread position: | 1-564 |
Cow position: | chr10:19839559-19840122 (view UCSC Genome Browser custom track) |
Alignm length: | 577 |
Alignm identity: | 385 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 84, 172 |
Conread position: | 1-564 |
Cow position: | chr10:21401281-21400702 (view UCSC Genome Browser custom track) |
Alignm length: | 591 |
Alignm identity: | 393 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 84, 240 |
Conread position: | 1-564 |
Cow position: | chr10:21741365-21740782 (view UCSC Genome Browser custom track) |
Alignm length: | 589 |
Alignm identity: | 395 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 84, 478 |
Conread position: | 1-564 |
Cow position: | chr10:25497781-25498321 (view UCSC Genome Browser custom track) |
Alignm length: | 570 |
Alignm identity: | 410 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 88, 209 |
Conread position: | 1-564 |
Cow position: | chr10:29695664-29696206 (view UCSC Genome Browser custom track) |
Alignm length: | 574 |
Alignm identity: | 401 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 52 |
Conread position: | 1-564 |
Cow position: | chr10:37769240-37769792 (view UCSC Genome Browser custom track) |
Alignm length: | 573 |
Alignm identity: | 397 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 169 |
Conread position: | 1-564 |
Cow position: | chr10:39817959-39817381 (view UCSC Genome Browser custom track) |
Alignm length: | 590 |
Alignm identity: | 401 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 84, 242 |
Conread position: | 1-564 |
Cow position: | chr10:41156840-41157417 (view UCSC Genome Browser custom track) |
Alignm length: | 592 |
Alignm identity: | 397 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 84, 240 |
Conread position: | 1-564 |
Cow position: | chr10:51953218-51952636 (view UCSC Genome Browser custom track) |
Alignm length: | 591 |
Alignm identity: | 400 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 84, 271 |
Conread position: | 1-564 |
Cow position: | chr10:57560163-57559579 (view UCSC Genome Browser custom track) |
Alignm length: | 592 |
Alignm identity: | 399 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 84, 271 |
Conread position: | 1-564 |
Cow position: | chr10:62216032-62216576 (view UCSC Genome Browser custom track) |
Alignm length: | 570 |
Alignm identity: | 406 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 53 |
Conread position: | 1-564 |
Cow position: | chr10:62777773-62778315 (view UCSC Genome Browser custom track) |
Alignm length: | 567 |
Alignm identity: | 413 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 84, 221 |
Conread position: | 2-408 |
Cow position: | chr10:54126881-54127275 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 84, 168 |
Conread position: | 2-564 |
Cow position: | chr10:8289387-8289952 (view UCSC Genome Browser custom track) |
Alignm length: | 582 |
Alignm identity: | 390 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 87, 171 |
Conread position: | 3-557 |
Cow position: | chr10:31523283-31523790 (view UCSC Genome Browser custom track) |
Alignm length: | 560 |
Alignm identity: | 373 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 30, 187 |
Conread position: | 3-564 |
Cow position: | chr10:38539071-38538528 (view UCSC Genome Browser custom track) |
Alignm length: | 568 |
Alignm identity: | 386 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 170 |
Conread position: | 3-564 |
Cow position: | chr10:39041885-39041336 (view UCSC Genome Browser custom track) |
Alignm length: | 570 |
Alignm identity: | 396 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 13 |
Conread position: | 4-405 |
Cow position: | chr10:14951148-14951526 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 268 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 289, 145 |
Conread position: | 4-564 |
Cow position: | chr10:62409430-62408886 (view UCSC Genome Browser custom track) |
Alignm length: | 567 |
Alignm identity: | 385 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 79, 19 |
Conread position: | 8-564 |
Cow position: | chr10:39179184-39179753 (view UCSC Genome Browser custom track) |
Alignm length: | 583 |
Alignm identity: | 391 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 233 |
Conread position: | 8-564 |
Cow position: | chr10:41876314-41876888 (view UCSC Genome Browser custom track) |
Alignm length: | 583 |
Alignm identity: | 388 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 282 |
Conread position: | 9-480 |
Cow position: | chr10:14886412-14885966 (view UCSC Genome Browser custom track) |
Alignm length: | 474 |
Alignm identity: | 304 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 313, 54 |
Conread position: | 11-564 |
Cow position: | chr10:281225-280650 (view UCSC Genome Browser custom track) |
Alignm length: | 581 |
Alignm identity: | 385 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 18 |
Conread position: | 11-564 |
Cow position: | chr10:32650167-32650702 (view UCSC Genome Browser custom track) |
Alignm length: | 561 |
Alignm identity: | 392 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 163 |
Conread position: | 12-530 |
Cow position: | chr10:34318822-34318333 (view UCSC Genome Browser custom track) |
Alignm length: | 522 |
Alignm identity: | 333 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 275, 137 |
Conread position: | 12-564 |
Cow position: | chr10:47906177-47906747 (view UCSC Genome Browser custom track) |
Alignm length: | 578 |
Alignm identity: | 393 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 267 |
Conread position: | 13-564 |
Cow position: | chr10:19511041-19511575 (view UCSC Genome Browser custom track) |
Alignm length: | 560 |
Alignm identity: | 390 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 162 |
Conread position: | 16-337 |
Cow position: | chr10:37040522-37040832 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 221 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 49, 63 |
Conread position: | 16-536 |
Cow position: | chr10:22100675-22101183 (view UCSC Genome Browser custom track) |
Alignm length: | 527 |
Alignm identity: | 361 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 157 |
Conread position: | 16-558 |
Cow position: | chr10:1374972-1375500 (view UCSC Genome Browser custom track) |
Alignm length: | 549 |
Alignm identity: | 381 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 113 |
Conread position: | 16-562 |
Cow position: | chr10:37060362-37060891 (view UCSC Genome Browser custom track) |
Alignm length: | 553 |
Alignm identity: | 381 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 157 |
Conread position: | 16-564 |
Cow position: | chr10:10581088-10581642 (view UCSC Genome Browser custom track) |
Alignm length: | 561 |
Alignm identity: | 387 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 239 |
Conread position: | 16-564 |
Cow position: | chr10:19143907-19143369 (view UCSC Genome Browser custom track) |
Alignm length: | 556 |
Alignm identity: | 388 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 132 |
Conread position: | 16-564 |
Cow position: | chr10:21486351-21486884 (view UCSC Genome Browser custom track) |
Alignm length: | 555 |
Alignm identity: | 380 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 130 |
Conread position: | 16-564 |
Cow position: | chr10:29847185-29846640 (view UCSC Genome Browser custom track) |
Alignm length: | 556 |
Alignm identity: | 391 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 132 |
Conread position: | 18-558 |
Cow position: | chr10:7283245-7282720 (view UCSC Genome Browser custom track) |
Alignm length: | 547 |
Alignm identity: | 369 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 157 |
Conread position: | 18-564 |
Cow position: | chr10:38345939-38345393 (view UCSC Genome Browser custom track) |
Alignm length: | 554 |
Alignm identity: | 383 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 135 |
Conread position: | 19-564 |
Cow position: | chr10:32577701-32578272 (view UCSC Genome Browser custom track) |
Alignm length: | 575 |
Alignm identity: | 392 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 476 |
Conread position: | 25-543 |
Cow position: | chr10:123768-124258 (view UCSC Genome Browser custom track) |
Alignm length: | 524 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 40 |
Conread position: | 30-558 |
Cow position: | chr10:14859434-14859941 (view UCSC Genome Browser custom track) |
Alignm length: | 534 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 34 |
Conread position: | 53-564 |
Cow position: | chr10:41352286-41351785 (view UCSC Genome Browser custom track) |
Alignm length: | 526 |
Alignm identity: | 335 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 34, 79 |
Conread position: | 60-563 |
Cow position: | chr10:57990486-57989995 (view UCSC Genome Browser custom track) |
Alignm length: | 510 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 46 |
Conread position: | 76-558 |
Cow position: | chr10:29633373-29632897 (view UCSC Genome Browser custom track) |
Alignm length: | 494 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 147 |
Conread position: | 150-564 |
Cow position: | chr10:25565703-25565276 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 79, 216 |
Conread position: | 173-452 |
Cow position: | chr10:19715464-19715186 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 144, 89 |
Conread position: | 202-564 |
Cow position: | chr10:54059737-54059385 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 243 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 92, 41 |
Conread position: | 209-463 |
Cow position: | chr10:15862674-15862428 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 175 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 241-530 |
Cow position: | chr10:58596154-58596438 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 202 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 60, 22 |
Conread position: | 258-563 |
Cow position: | chr10:10478467-10478179 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 221 |
Alignm E-value: | 7e-38 |
Alignm gaps (pig, cow): | 36, 86 |
Conread position: | 258-564 |
Cow position: | chr10:276256-276563 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 123 |
Conread position: | 258-564 |
Cow position: | chr10:25359065-25359368 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 224 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 36 |
Conread position: | 263-395 |
Cow position: | chr10:1938173-1938035 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 106 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 267-564 |
Cow position: | chr10:42628347-42628630 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 216 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 27, 20 |
Conread position: | 328-497 |
Cow position: | chr10:50018322-50018157 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 135 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 41, 127 |
Conread position: | 371-562 |
Cow position: | chr10:20383760-20383576 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 137 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 395-564 |
Cow position: | chr10:13366050-13365881 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 131 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 125, 107 |
Show alignments to all cow chromosomes.