Cow genome map

Conread name: raor023_p21.y1

Conread position: 1-147
Cow position:
Alignm length: 147
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 1-169
Cow position:
Alignm length: 172
Alignm identity: 124
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 84, 0

Conread position: 1-209
Cow position:
Alignm length: 213
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 186

Conread position: 1-238
Cow position:
Alignm length: 241
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 172

Conread position: 1-239
Cow position:
Alignm length: 244
Alignm identity: 177
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 73, 32

Conread position: 1-285
Cow position:
Alignm length: 289
Alignm identity: 189
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 84, 198

Conread position: 1-386
Cow position:
Alignm length: 414
Alignm identity: 277
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 84, 384

Conread position: 1-400
Cow position:
Alignm length: 425
Alignm identity: 282
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 84, 172

Conread position: 1-452
Cow position:
Alignm length: 480
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 289

Conread position: 1-467
Cow position:
Alignm length: 498
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 240

Conread position: 1-500
Cow position:
Alignm length: 528
Alignm identity: 351
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 88, 217

Conread position: 1-523
Cow position:
Alignm length: 527
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 27

Conread position: 1-557
Cow position:
Alignm length: 561
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 88

Conread position: 1-558
Cow position:
Alignm length: 563
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 211

Conread position: 1-558
Cow position:
Alignm length: 559
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 163

Conread position: 1-562
Cow position:
Alignm length: 586
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 88

Conread position: 1-564
Cow position:
Alignm length: 590
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 27

Conread position: 1-564
Cow position:
Alignm length: 570
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 249

Conread position: 1-564
Cow position:
Alignm length: 591
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 24

Conread position: 1-564
Cow position:
Alignm length: 592
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 289

Conread position: 1-564
Cow position:
Alignm length: 583
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 266

Conread position: 1-564
Cow position:
Alignm length: 589
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 248

Conread position: 1-564
Cow position:
Alignm length: 571
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 166

Conread position: 2-558
Cow position:
Alignm length: 561
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 241

Conread position: 9-564
Cow position:
Alignm length: 563
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 28

Conread position: 13-155
Cow position:
Alignm length: 144
Alignm identity: 116
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 111, 0

Conread position: 13-536
Cow position:
Alignm length: 532
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 116

Conread position: 13-550
Cow position:
Alignm length: 544
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 160

Conread position: 13-562
Cow position:
Alignm length: 556
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 151

Conread position: 13-563
Cow position:
Alignm length: 575
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 276

Conread position: 13-564
Cow position:
Alignm length: 564
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 258

Conread position: 13-564
Cow position:
Alignm length: 557
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 136

Conread position: 13-564
Cow position:
Alignm length: 555
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 123

Conread position: 13-564
Cow position:
Alignm length: 558
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 206

Conread position: 13-564
Cow position:
Alignm length: 567
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 160

Conread position: 16-377
Cow position:
Alignm length: 365
Alignm identity: 232
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 284, 70

Conread position: 16-540
Cow position:
Alignm length: 531
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 65

Conread position: 16-558
Cow position:
Alignm length: 549
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 157

Conread position: 16-558
Cow position:
Alignm length: 548
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 216

Conread position: 16-564
Cow position:
Alignm length: 556
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 157

Conread position: 16-564
Cow position:
Alignm length: 554
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 136

Conread position: 16-564
Cow position:
Alignm length: 555
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 157

Conread position: 16-564
Cow position:
Alignm length: 554
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 148

Conread position: 21-556
Cow position:
Alignm length: 540
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 219

Conread position: 21-558
Cow position:
Alignm length: 571
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 371

Conread position: 25-337
Cow position:
Alignm length: 333
Alignm identity: 228
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 54, 174

Conread position: 27-564
Cow position:
Alignm length: 557
Alignm identity: 363
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 32, 94

Conread position: 30-564
Cow position:
Alignm length: 552
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 157

Conread position: 45-418
Cow position:
Alignm length: 382
Alignm identity: 252
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 44, 18

Conread position: 45-564
Cow position:
Alignm length: 535
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 10

Conread position: 46-564
Cow position:
Alignm length: 525
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 120

Conread position: 63-558
Cow position:
Alignm length: 501
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 160

Conread position: 88-536
Cow position:
Alignm length: 452
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 76

Conread position: 150-564
Cow position:
Alignm length: 415
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 0

Conread position: 173-543
Cow position:
Alignm length: 374
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 83

Conread position: 180-559
Cow position:
Alignm length: 389
Alignm identity: 249
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 5, 145

Conread position: 186-562
Cow position:
Alignm length: 382
Alignm identity: 247
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 115, 7

Conread position: 212-559
Cow position:
Alignm length: 355
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 17

Conread position: 213-530
Cow position:
Alignm length: 326
Alignm identity: 229
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 81, 49

Conread position: 225-564
Cow position:
Alignm length: 343
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 8

Conread position: 258-564
Cow position:
Alignm length: 309
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 19

Conread position: 260-564
Cow position:
Alignm length: 309
Alignm identity: 201
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 37, 54

Conread position: 267-564
Cow position:
Alignm length: 301
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 202

Conread position: 299-564
Cow position:
Alignm length: 269
Alignm identity: 178
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 18, 44

Conread position: 365-561
Cow position:
Alignm length: 197
Alignm identity: 135
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 98, 0

Conread position: 372-517
Cow position:
Alignm length: 146
Alignm identity: 110
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 94, 0

Show alignments to all cow chromosomes.