Cow genome map

Conread name: raor023_p21.y1

Conread position: 1-138
Cow position:
Alignm length: 141
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 86, 0

Conread position: 1-151
Cow position:
Alignm length: 151
Alignm identity: 114
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 83, 0

Conread position: 1-167
Cow position:
Alignm length: 170
Alignm identity: 121
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 88, 143

Conread position: 1-169
Cow position:
Alignm length: 172
Alignm identity: 126
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 88, 0

Conread position: 1-169
Cow position:
Alignm length: 172
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 84, 0

Conread position: 1-186
Cow position:
Alignm length: 190
Alignm identity: 131
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 85, 0

Conread position: 1-221
Cow position:
Alignm length: 225
Alignm identity: 161
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 45, 53

Conread position: 1-224
Cow position:
Alignm length: 229
Alignm identity: 155
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 13, 167

Conread position: 1-226
Cow position:
Alignm length: 229
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 84, 225

Conread position: 1-239
Cow position:
Alignm length: 242
Alignm identity: 167
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 86, 50

Conread position: 1-239
Cow position:
Alignm length: 243
Alignm identity: 171
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 63, 100

Conread position: 1-249
Cow position:
Alignm length: 252
Alignm identity: 178
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 86, 158

Conread position: 1-363
Cow position:
Alignm length: 390
Alignm identity: 262
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 84, 240

Conread position: 1-397
Cow position:
Alignm length: 425
Alignm identity: 295
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 88, 219

Conread position: 1-415
Cow position:
Alignm length: 438
Alignm identity: 288
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 84, 20

Conread position: 1-437
Cow position:
Alignm length: 440
Alignm identity: 289
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 85, 166

Conread position: 1-440
Cow position:
Alignm length: 444
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 83

Conread position: 1-442
Cow position:
Alignm length: 453
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 68

Conread position: 1-471
Cow position:
Alignm length: 484
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 151

Conread position: 1-500
Cow position:
Alignm length: 506
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 36

Conread position: 1-501
Cow position:
Alignm length: 506
Alignm identity: 350
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 25, 127

Conread position: 1-508
Cow position:
Alignm length: 547
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 403

Conread position: 1-529
Cow position:
Alignm length: 535
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 53

Conread position: 1-530
Cow position:
Alignm length: 559
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 219

Conread position: 1-537
Cow position:
Alignm length: 541
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 166

Conread position: 1-558
Cow position:
Alignm length: 576
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 116

Conread position: 1-558
Cow position:
Alignm length: 572
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 123

Conread position: 1-559
Cow position:
Alignm length: 579
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 105

Conread position: 1-559
Cow position:
Alignm length: 562
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 163

Conread position: 1-563
Cow position:
Alignm length: 567
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 89

Conread position: 1-563
Cow position:
Alignm length: 569
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 54

Conread position: 1-564
Cow position:
Alignm length: 591
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 61

Conread position: 1-564
Cow position:
Alignm length: 587
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 251

Conread position: 1-564
Cow position:
Alignm length: 569
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 40

Conread position: 1-564
Cow position:
Alignm length: 573
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 117

Conread position: 1-564
Cow position:
Alignm length: 591
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 52

Conread position: 1-564
Cow position:
Alignm length: 590
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 288

Conread position: 1-564
Cow position:
Alignm length: 591
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 289

Conread position: 1-564
Cow position:
Alignm length: 589
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 367

Conread position: 1-564
Cow position:
Alignm length: 591
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 289

Conread position: 1-564
Cow position:
Alignm length: 592
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 23

Conread position: 1-564
Cow position:
Alignm length: 589
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 189

Conread position: 1-564
Cow position:
Alignm length: 568
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 81

Conread position: 1-564
Cow position:
Alignm length: 597
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 25

Conread position: 1-564
Cow position:
Alignm length: 592
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 290

Conread position: 1-564
Cow position:
Alignm length: 572
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 74

Conread position: 1-564
Cow position:
Alignm length: 598
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 289

Conread position: 1-564
Cow position:
Alignm length: 568
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 195

Conread position: 2-500
Cow position:
Alignm length: 508
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 15

Conread position: 3-239
Cow position:
Alignm length: 241
Alignm identity: 169
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 43, 51

Conread position: 3-253
Cow position:
Alignm length: 255
Alignm identity: 146
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 43, 51

Conread position: 3-558
Cow position:
Alignm length: 563
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 186

Conread position: 3-559
Cow position:
Alignm length: 561
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 156

Conread position: 3-564
Cow position:
Alignm length: 569
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 131

Conread position: 4-361
Cow position:
Alignm length: 364
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 59

Conread position: 4-536
Cow position:
Alignm length: 533
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 4-536
Cow position:
Alignm length: 537
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 59

Conread position: 4-543
Cow position:
Alignm length: 551
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 173

Conread position: 4-559
Cow position:
Alignm length: 570
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 165

Conread position: 4-564
Cow position:
Alignm length: 563
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 24

Conread position: 4-564
Cow position:
Alignm length: 572
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 145

Conread position: 4-564
Cow position:
Alignm length: 565
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 179

Conread position: 4-564
Cow position:
Alignm length: 568
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 7

Conread position: 5-564
Cow position:
Alignm length: 567
Alignm identity: 363
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 331, 57

Conread position: 7-564
Cow position:
Alignm length: 566
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 168

Conread position: 7-564
Cow position:
Alignm length: 588
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 215

Conread position: 7-564
Cow position:
Alignm length: 584
Alignm identity: 387
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 291, 97

Conread position: 8-346
Cow position:
Alignm length: 346
Alignm identity: 237
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 80, 116

Conread position: 8-541
Cow position:
Alignm length: 561
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 282

Conread position: 8-564
Cow position:
Alignm length: 568
Alignm identity: 361
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 35, 20

Conread position: 8-564
Cow position:
Alignm length: 577
Alignm identity: 372
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 79, 259

Conread position: 9-557
Cow position:
Alignm length: 553
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 9-558
Cow position:
Alignm length: 552
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 54

Conread position: 11-564
Cow position:
Alignm length: 565
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 189

Conread position: 11-564
Cow position:
Alignm length: 572
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 39

Conread position: 11-564
Cow position:
Alignm length: 584
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 255

Conread position: 13-558
Cow position:
Alignm length: 551
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 155

Conread position: 13-559
Cow position:
Alignm length: 554
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 141

Conread position: 13-562
Cow position:
Alignm length: 560
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 139

Conread position: 13-564
Cow position:
Alignm length: 573
Alignm identity: 364
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 74, 90

Conread position: 13-564
Cow position:
Alignm length: 560
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 133

Conread position: 13-564
Cow position:
Alignm length: 565
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 136

Conread position: 13-564
Cow position:
Alignm length: 563
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 23

Conread position: 16-173
Cow position:
Alignm length: 164
Alignm identity: 119
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 16-403
Cow position:
Alignm length: 393
Alignm identity: 267
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 71, 150

Conread position: 16-501
Cow position:
Alignm length: 492
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 151

Conread position: 16-543
Cow position:
Alignm length: 543
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 135

Conread position: 16-556
Cow position:
Alignm length: 550
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 157

Conread position: 16-564
Cow position:
Alignm length: 562
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 138

Conread position: 16-564
Cow position:
Alignm length: 555
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 157

Conread position: 16-564
Cow position:
Alignm length: 556
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 145

Conread position: 16-564
Cow position:
Alignm length: 555
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 108

Conread position: 16-564
Cow position:
Alignm length: 555
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 157

Conread position: 16-564
Cow position:
Alignm length: 555
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 157

Conread position: 16-564
Cow position:
Alignm length: 556
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 157

Conread position: 17-530
Cow position:
Alignm length: 521
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 13

Conread position: 18-564
Cow position:
Alignm length: 553
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 125

Conread position: 23-564
Cow position:
Alignm length: 549
Alignm identity: 344
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 23, 31

Conread position: 24-559
Cow position:
Alignm length: 543
Alignm identity: 339
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 45, 62

Conread position: 25-464
Cow position:
Alignm length: 446
Alignm identity: 292
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 64, 88

Conread position: 28-489
Cow position:
Alignm length: 474
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 112

Conread position: 28-564
Cow position:
Alignm length: 542
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 147

Conread position: 33-238
Cow position:
Alignm length: 209
Alignm identity: 155
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 54, 0

Conread position: 40-564
Cow position:
Alignm length: 552
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 248

Conread position: 41-564
Cow position:
Alignm length: 552
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 441

Conread position: 46-564
Cow position:
Alignm length: 525
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 119

Conread position: 50-564
Cow position:
Alignm length: 530
Alignm identity: 337
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 39, 13

Conread position: 52-558
Cow position:
Alignm length: 532
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 31

Conread position: 64-564
Cow position:
Alignm length: 513
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 41

Conread position: 70-564
Cow position:
Alignm length: 498
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 12

Conread position: 76-558
Cow position:
Alignm length: 498
Alignm identity: 326
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 99, 41

Conread position: 83-564
Cow position:
Alignm length: 485
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 36

Conread position: 89-554
Cow position:
Alignm length: 469
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 75

Conread position: 100-564
Cow position:
Alignm length: 469
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 33

Conread position: 105-564
Cow position:
Alignm length: 464
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 161

Conread position: 117-562
Cow position:
Alignm length: 450
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 64

Conread position: 127-532
Cow position:
Alignm length: 407
Alignm identity: 278
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 190, 73

Conread position: 132-562
Cow position:
Alignm length: 435
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 56

Conread position: 150-564
Cow position:
Alignm length: 416
Alignm identity: 283
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 384, 103

Conread position: 190-564
Cow position:
Alignm length: 380
Alignm identity: 246
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 23, 40

Conread position: 191-564
Cow position:
Alignm length: 379
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 44

Conread position: 204-559
Cow position:
Alignm length: 360
Alignm identity: 244
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 90, 62

Conread position: 204-564
Cow position:
Alignm length: 365
Alignm identity: 253
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 90, 20

Conread position: 212-553
Cow position:
Alignm length: 346
Alignm identity: 223
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 105, 33

Conread position: 213-559
Cow position:
Alignm length: 351
Alignm identity: 244
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 83, 49

Conread position: 213-562
Cow position:
Alignm length: 371
Alignm identity: 250
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 17, 34

Conread position: 213-563
Cow position:
Alignm length: 354
Alignm identity: 235
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 81, 53

Conread position: 215-495
Cow position:
Alignm length: 292
Alignm identity: 197
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 102, 9

Conread position: 241-562
Cow position:
Alignm length: 326
Alignm identity: 216
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 63, 7

Conread position: 257-564
Cow position:
Alignm length: 312
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 95

Conread position: 258-451
Cow position:
Alignm length: 197
Alignm identity: 157
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 36, 0

Conread position: 258-563
Cow position:
Alignm length: 315
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 258-564
Cow position:
Alignm length: 315
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 213

Conread position: 258-564
Cow position:
Alignm length: 312
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 212

Conread position: 258-564
Cow position:
Alignm length: 311
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 212

Conread position: 261-564
Cow position:
Alignm length: 315
Alignm identity: 223
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 33, 196

Conread position: 266-564
Cow position:
Alignm length: 302
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 102

Conread position: 269-564
Cow position:
Alignm length: 299
Alignm identity: 209
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 27, 105

Conread position: 280-564
Cow position:
Alignm length: 286
Alignm identity: 205
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 37, 64

Conread position: 293-562
Cow position:
Alignm length: 271
Alignm identity: 191
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 24, 52

Conread position: 300-564
Cow position:
Alignm length: 267
Alignm identity: 194
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 17, 112

Conread position: 305-536
Cow position:
Alignm length: 234
Alignm identity: 166
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 13, 163

Conread position: 358-558
Cow position:
Alignm length: 202
Alignm identity: 151
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 15, 9

Conread position: 393-564
Cow position:
Alignm length: 173
Alignm identity: 128
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 127, 73

Show alignments to all cow chromosomes.