Cow genome map


           Conread name:
           raor023_p21.y1
        

               Conread position:
               1-161
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               150, 96
               

               Conread position:
               1-224
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               85, 172
               

               Conread position:
               1-238
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               177
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               1-315
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               17, 35
               

               Conread position:
               1-401
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               284
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               86, 22
               

               Conread position:
               1-421
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               260
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               123, 210
               

               Conread position:
               1-433
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               303
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               88, 289
               

               Conread position:
               1-459
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 42
               

               Conread position:
               1-530
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 245
               

               Conread position:
               1-551
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 87
               

               Conread position:
               1-557
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               363
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               85, 163
               

               Conread position:
               1-558
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 112
               

               Conread position:
               1-558
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 38
               

               Conread position:
               1-563
               

               Cow position:
               
               

               Alignm length:
               590
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 279
               

               Conread position:
               1-564
               

               Cow position:
               
               

               Alignm length:
               591
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 289
               

               Conread position:
               1-564
               

               Cow position:
               
               

               Alignm length:
               588
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 270
               

               Conread position:
               1-564
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 57
               

               Conread position:
               1-564
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 199
               

               Conread position:
               1-564
               

               Cow position:
               
               

               Alignm length:
               591
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 289
               

               Conread position:
               1-564
               

               Cow position:
               
               

               Alignm length:
               590
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 150
               

               Conread position:
               1-564
               

               Cow position:
               
               

               Alignm length:
               592
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 280
               

               Conread position:
               1-564
               

               Cow position:
               
               

               Alignm length:
               591
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 138
               

               Conread position:
               1-564
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 15
               

               Conread position:
               1-564
               

               Cow position:
               
               

               Alignm length:
               585
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 172
               

               Conread position:
               1-564
               

               Cow position:
               
               

               Alignm length:
               591
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 289
               

               Conread position:
               1-564
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 164
               

               Conread position:
               1-564
               

               Cow position:
               
               

               Alignm length:
               585
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 17
               

               Conread position:
               1-564
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 222
               

               Conread position:
               1-564
               

               Cow position:
               
               

               Alignm length:
               605
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               170, 246
               

               Conread position:
               1-564
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 107
               

               Conread position:
               3-312
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               212
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               72, 9
               

               Conread position:
               3-553
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 43
               

               Conread position:
               4-170
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               83, 123
               

               Conread position:
               4-471
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 171
               

               Conread position:
               5-564
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               288, 61
               

               Conread position:
               7-169
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               7-221
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               8-558
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 207
               

               Conread position:
               9-564
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 166
               

               Conread position:
               13-564
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 154
               

               Conread position:
               13-564
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 128
               

               Conread position:
               13-564
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 25
               

               Conread position:
               16-536
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 130
               

               Conread position:
               16-564
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 162
               

               Conread position:
               18-563
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 181
               

               Conread position:
               23-564
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 218
               

               Conread position:
               24-500
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 6
               

               Conread position:
               25-269
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               60, 138
               

               Conread position:
               28-564
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 91
               

               Conread position:
               28-564
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 87
               

               Conread position:
               40-166
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               44-559
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 93
               

               Conread position:
               46-453
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 120
               

               Conread position:
               46-563
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 167
               

               Conread position:
               76-563
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 45
               

               Conread position:
               76-564
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 134
               

               Conread position:
               139-564
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 90
               

               Conread position:
               150-564
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               285
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               24, 15
               

               Conread position:
               189-558
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               250
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               128, 67
               

               Conread position:
               204-564
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 58
               

               Conread position:
               207-558
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 9
               

               Conread position:
               212-558
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 17
               

               Conread position:
               238-564
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               63, 24
               

               Conread position:
               243-463
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               13, 28
               

               Conread position:
               258-481
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               59, 28
               

               Conread position:
               258-558
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 110
               

               Conread position:
               258-564
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               215
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               36, 89
               

               Conread position:
               261-471
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               33, 206
               

               Conread position:
               301-564
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               16, 80
               

               Conread position:
               304-562
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               9, 26
               

               Conread position:
               308-564
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               187
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               9, 74
               

               Conread position:
               316-564
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               118, 152
               

               Conread position:
               368-564
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               370-558
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               25, 78
               

               Conread position:
               385-564
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               8, 82
               
Show alignments to all cow chromosomes.