Cow genome map

Conread name: raor023_p21.y1

Conread position: 1-181
Cow position:
Alignm length: 184
Alignm identity: 133
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 86, 174

Conread position: 1-186
Cow position:
Alignm length: 189
Alignm identity: 132
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 86, 180

Conread position: 1-216
Cow position:
Alignm length: 220
Alignm identity: 174
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 85, 27

Conread position: 1-238
Cow position:
Alignm length: 242
Alignm identity: 178
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 86, 103

Conread position: 1-239
Cow position:
Alignm length: 242
Alignm identity: 167
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 85, 165

Conread position: 1-244
Cow position:
Alignm length: 248
Alignm identity: 176
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 86, 239

Conread position: 1-294
Cow position:
Alignm length: 298
Alignm identity: 179
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 72, 132

Conread position: 1-386
Cow position:
Alignm length: 413
Alignm identity: 277
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 84, 240

Conread position: 1-403
Cow position:
Alignm length: 409
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 56

Conread position: 1-557
Cow position:
Alignm length: 562
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 130

Conread position: 1-562
Cow position:
Alignm length: 566
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 158

Conread position: 1-563
Cow position:
Alignm length: 564
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 103

Conread position: 1-563
Cow position:
Alignm length: 590
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 220

Conread position: 1-564
Cow position:
Alignm length: 583
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 123

Conread position: 1-564
Cow position:
Alignm length: 588
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 121

Conread position: 1-564
Cow position:
Alignm length: 571
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 230

Conread position: 1-564
Cow position:
Alignm length: 569
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 223

Conread position: 1-564
Cow position:
Alignm length: 592
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 289

Conread position: 1-564
Cow position:
Alignm length: 594
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 243

Conread position: 1-564
Cow position:
Alignm length: 567
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 166

Conread position: 1-564
Cow position:
Alignm length: 591
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 269

Conread position: 3-209
Cow position:
Alignm length: 211
Alignm identity: 152
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 84, 65

Conread position: 4-558
Cow position:
Alignm length: 558
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 219

Conread position: 4-564
Cow position:
Alignm length: 567
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 144

Conread position: 7-539
Cow position:
Alignm length: 559
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 306

Conread position: 11-563
Cow position:
Alignm length: 589
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 280

Conread position: 13-500
Cow position:
Alignm length: 494
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 17

Conread position: 16-238
Cow position:
Alignm length: 226
Alignm identity: 159
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 71, 151

Conread position: 16-564
Cow position:
Alignm length: 555
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 157

Conread position: 16-564
Cow position:
Alignm length: 555
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 151

Conread position: 16-564
Cow position:
Alignm length: 555
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 159

Conread position: 18-542
Cow position:
Alignm length: 531
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 132

Conread position: 18-559
Cow position:
Alignm length: 547
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 26

Conread position: 25-558
Cow position:
Alignm length: 540
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 148

Conread position: 31-459
Cow position:
Alignm length: 437
Alignm identity: 278
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 44, 119

Conread position: 40-558
Cow position:
Alignm length: 523
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 127

Conread position: 45-564
Cow position:
Alignm length: 527
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 128

Conread position: 46-469
Cow position:
Alignm length: 430
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 127

Conread position: 46-562
Cow position:
Alignm length: 520
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 121

Conread position: 53-564
Cow position:
Alignm length: 517
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 190

Conread position: 65-563
Cow position:
Alignm length: 506
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 101

Conread position: 150-564
Cow position:
Alignm length: 418
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 116

Conread position: 190-558
Cow position:
Alignm length: 376
Alignm identity: 250
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 39, 19

Conread position: 194-558
Cow position:
Alignm length: 367
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 10

Conread position: 197-564
Cow position:
Alignm length: 374
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 30

Conread position: 204-557
Cow position:
Alignm length: 360
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 23

Conread position: 217-562
Cow position:
Alignm length: 349
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 45

Conread position: 249-564
Cow position:
Alignm length: 322
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 107

Conread position: 255-564
Cow position:
Alignm length: 314
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 129

Conread position: 256-564
Cow position:
Alignm length: 317
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 92

Conread position: 258-516
Cow position:
Alignm length: 266
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 203

Conread position: 258-564
Cow position:
Alignm length: 312
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 112

Conread position: 258-564
Cow position:
Alignm length: 310
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 183

Conread position: 258-564
Cow position:
Alignm length: 309
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 36

Conread position: 262-564
Cow position:
Alignm length: 307
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 203

Conread position: 269-564
Cow position:
Alignm length: 299
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 178

Conread position: 276-564
Cow position:
Alignm length: 292
Alignm identity: 196
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 15, 113

Conread position: 282-564
Cow position:
Alignm length: 286
Alignm identity: 204
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 14, 53

Conread position: 299-564
Cow position:
Alignm length: 270
Alignm identity: 180
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 43

Conread position: 335-564
Cow position:
Alignm length: 230
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 350-564
Cow position:
Alignm length: 216
Alignm identity: 160
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 32, 7

Conread position: 354-564
Cow position:
Alignm length: 212
Alignm identity: 154
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 168, 17

Conread position: 375-564
Cow position:
Alignm length: 193
Alignm identity: 137
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 46, 37

Conread position: 380-562
Cow position:
Alignm length: 183
Alignm identity: 130
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 74, 0

Conread position: 383-558
Cow position:
Alignm length: 176
Alignm identity: 136
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 9, 0

Show alignments to all cow chromosomes.