Cow genome map
| Conread name: | raor023_p21.y1 | 
| Conread position: | 1-169 | 
| Cow position: | chr2:10493373-10493544 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 7e-26 | 
| Alignm gaps (pig, cow): | 84, 0 | 
| Conread position: | 1-169 | 
| Cow position: | chr2:36237876-36238047 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 7e-26 | 
| Alignm gaps (pig, cow): | 84, 0 | 
| Conread position: | 1-192 | 
| Cow position: | chr2:16078480-16078288 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 7e-26 | 
| Alignm gaps (pig, cow): | 86, 25 | 
| Conread position: | 1-216 | 
| Cow position: | chr2:82165040-82165254 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 88, 49 | 
| Conread position: | 1-224 | 
| Cow position: | chr2:15579079-15578841 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 63, 194 | 
| Conread position: | 1-225 | 
| Cow position: | chr2:5486061-5485831 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 53 | 
| Conread position: | 1-230 | 
| Cow position: | chr2:46945433-46945655 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 25, 167 | 
| Conread position: | 1-236 | 
| Cow position: | chr2:11970136-11969902 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 25, 64 | 
| Conread position: | 1-244 | 
| Cow position: | chr2:44166428-44166201 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 83, 0 | 
| Conread position: | 1-285 | 
| Cow position: | chr2:25244254-25244531 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 9e-38 | 
| Alignm gaps (pig, cow): | 238, 78 | 
| Conread position: | 1-362 | 
| Cow position: | chr2:7210315-7210666 (view UCSC Genome Browser custom track) | 
| Alignm length: | 368 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 85, 62 | 
| Conread position: | 1-401 | 
| Cow position: | chr2:40244755-40245124 (view UCSC Genome Browser custom track) | 
| Alignm length: | 406 | 
| Alignm identity: | 290 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 85, 131 | 
| Conread position: | 1-403 | 
| Cow position: | chr2:7900941-7901344 (view UCSC Genome Browser custom track) | 
| Alignm length: | 416 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 63, 223 | 
| Conread position: | 1-482 | 
| Cow position: | chr2:85069357-85068898 (view UCSC Genome Browser custom track) | 
| Alignm length: | 489 | 
| Alignm identity: | 338 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 86, 73 | 
| Conread position: | 1-501 | 
| Cow position: | chr2:2363047-2363526 (view UCSC Genome Browser custom track) | 
| Alignm length: | 507 | 
| Alignm identity: | 370 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 29 | 
| Conread position: | 1-519 | 
| Cow position: | chr2:22076673-22077179 (view UCSC Genome Browser custom track) | 
| Alignm length: | 525 | 
| Alignm identity: | 358 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 88, 19 | 
| Conread position: | 1-524 | 
| Cow position: | chr2:38589069-38589572 (view UCSC Genome Browser custom track) | 
| Alignm length: | 530 | 
| Alignm identity: | 334 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 85, 166 | 
| Conread position: | 1-536 | 
| Cow position: | chr2:16288131-16288660 (view UCSC Genome Browser custom track) | 
| Alignm length: | 543 | 
| Alignm identity: | 416 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 86, 214 | 
| Conread position: | 1-536 | 
| Cow position: | chr2:78741029-78741542 (view UCSC Genome Browser custom track) | 
| Alignm length: | 545 | 
| Alignm identity: | 388 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 21, 90 | 
| Conread position: | 1-556 | 
| Cow position: | chr2:782848-782309 (view UCSC Genome Browser custom track) | 
| Alignm length: | 563 | 
| Alignm identity: | 384 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 10 | 
| Conread position: | 1-556 | 
| Cow position: | chr2:1673762-1673226 (view UCSC Genome Browser custom track) | 
| Alignm length: | 559 | 
| Alignm identity: | 387 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 293, 140 | 
| Conread position: | 1-556 | 
| Cow position: | chr2:54649911-54649370 (view UCSC Genome Browser custom track) | 
| Alignm length: | 566 | 
| Alignm identity: | 400 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 25 | 
| Conread position: | 1-558 | 
| Cow position: | chr2:3748796-3749339 (view UCSC Genome Browser custom track) | 
| Alignm length: | 566 | 
| Alignm identity: | 357 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 38, 51 | 
| Conread position: | 1-558 | 
| Cow position: | chr2:32388442-32388995 (view UCSC Genome Browser custom track) | 
| Alignm length: | 568 | 
| Alignm identity: | 398 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 88, 150 | 
| Conread position: | 1-558 | 
| Cow position: | chr2:36032181-36031639 (view UCSC Genome Browser custom track) | 
| Alignm length: | 565 | 
| Alignm identity: | 424 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 70, 50 | 
| Conread position: | 1-558 | 
| Cow position: | chr2:41655939-41656514 (view UCSC Genome Browser custom track) | 
| Alignm length: | 586 | 
| Alignm identity: | 389 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 84, 47 | 
| Conread position: | 1-558 | 
| Cow position: | chr2:42334376-42333837 (view UCSC Genome Browser custom track) | 
| Alignm length: | 568 | 
| Alignm identity: | 382 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 86, 36 | 
| Conread position: | 1-559 | 
| Cow position: | chr2:44992402-44991849 (view UCSC Genome Browser custom track) | 
| Alignm length: | 566 | 
| Alignm identity: | 419 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 84, 15 | 
| Conread position: | 1-562 | 
| Cow position: | chr2:47039554-47038979 (view UCSC Genome Browser custom track) | 
| Alignm length: | 587 | 
| Alignm identity: | 385 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 84, 373 | 
| Conread position: | 1-563 | 
| Cow position: | chr2:176654-176094 (view UCSC Genome Browser custom track) | 
| Alignm length: | 575 | 
| Alignm identity: | 380 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 87, 172 | 
| Conread position: | 1-563 | 
| Cow position: | chr2:19009114-19009668 (view UCSC Genome Browser custom track) | 
| Alignm length: | 572 | 
| Alignm identity: | 388 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 15, 175 | 
| Conread position: | 1-563 | 
| Cow position: | chr2:26920547-26921131 (view UCSC Genome Browser custom track) | 
| Alignm length: | 588 | 
| Alignm identity: | 397 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 83, 240 | 
| Conread position: | 1-564 | 
| Cow position: | chr2:202777-202218 (view UCSC Genome Browser custom track) | 
| Alignm length: | 578 | 
| Alignm identity: | 404 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 188 | 
| Conread position: | 1-564 | 
| Cow position: | chr2:421905-422506 (view UCSC Genome Browser custom track) | 
| Alignm length: | 605 | 
| Alignm identity: | 410 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 86, 246 | 
| Conread position: | 1-564 | 
| Cow position: | chr2:2102561-2102032 (view UCSC Genome Browser custom track) | 
| Alignm length: | 570 | 
| Alignm identity: | 404 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 53, 47 | 
| Conread position: | 1-564 | 
| Cow position: | chr2:2185372-2184821 (view UCSC Genome Browser custom track) | 
| Alignm length: | 569 | 
| Alignm identity: | 353 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 84, 186 | 
| Conread position: | 1-564 | 
| Cow position: | chr2:2379978-2380561 (view UCSC Genome Browser custom track) | 
| Alignm length: | 592 | 
| Alignm identity: | 395 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 76, 219 | 
| Conread position: | 1-564 | 
| Cow position: | chr2:3325717-3325129 (view UCSC Genome Browser custom track) | 
| Alignm length: | 592 | 
| Alignm identity: | 390 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 84, 289 | 
| Conread position: | 1-564 | 
| Cow position: | chr2:5481740-5481206 (view UCSC Genome Browser custom track) | 
| Alignm length: | 569 | 
| Alignm identity: | 391 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 201, 89 | 
| Conread position: | 1-564 | 
| Cow position: | chr2:9906782-9907348 (view UCSC Genome Browser custom track) | 
| Alignm length: | 591 | 
| Alignm identity: | 396 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 88, 280 | 
| Conread position: | 1-564 | 
| Cow position: | chr2:10844444-10843903 (view UCSC Genome Browser custom track) | 
| Alignm length: | 572 | 
| Alignm identity: | 413 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 34, 23 | 
| Conread position: | 1-564 | 
| Cow position: | chr2:14560050-14560635 (view UCSC Genome Browser custom track) | 
| Alignm length: | 588 | 
| Alignm identity: | 397 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 88, 487 | 
| Conread position: | 1-564 | 
| Cow position: | chr2:26865689-26865107 (view UCSC Genome Browser custom track) | 
| Alignm length: | 590 | 
| Alignm identity: | 397 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 84, 240 | 
| Conread position: | 1-564 | 
| Cow position: | chr2:27816623-27817212 (view UCSC Genome Browser custom track) | 
| Alignm length: | 593 | 
| Alignm identity: | 399 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 84, 243 | 
| Conread position: | 1-564 | 
| Cow position: | chr2:32654224-32654783 (view UCSC Genome Browser custom track) | 
| Alignm length: | 572 | 
| Alignm identity: | 434 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 9, 233 | 
| Conread position: | 1-564 | 
| Cow position: | chr2:39420446-39421028 (view UCSC Genome Browser custom track) | 
| Alignm length: | 592 | 
| Alignm identity: | 401 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 82, 240 | 
| Conread position: | 1-564 | 
| Cow position: | chr2:44090156-44090735 (view UCSC Genome Browser custom track) | 
| Alignm length: | 591 | 
| Alignm identity: | 401 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 84, 289 | 
| Conread position: | 1-564 | 
| Cow position: | chr2:44936199-44935649 (view UCSC Genome Browser custom track) | 
| Alignm length: | 576 | 
| Alignm identity: | 427 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 203 | 
| Conread position: | 1-564 | 
| Cow position: | chr2:51305987-51305472 (view UCSC Genome Browser custom track) | 
| Alignm length: | 570 | 
| Alignm identity: | 403 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 86, 21 | 
| Conread position: | 1-564 | 
| Cow position: | chr2:51991680-51991095 (view UCSC Genome Browser custom track) | 
| Alignm length: | 590 | 
| Alignm identity: | 406 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 84, 240 | 
| Conread position: | 1-564 | 
| Cow position: | chr2:52615321-52615907 (view UCSC Genome Browser custom track) | 
| Alignm length: | 592 | 
| Alignm identity: | 405 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 84, 289 | 
| Conread position: | 1-564 | 
| Cow position: | chr2:54736481-54737059 (view UCSC Genome Browser custom track) | 
| Alignm length: | 590 | 
| Alignm identity: | 409 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 84, 202 | 
| Conread position: | 1-564 | 
| Cow position: | chr2:57142837-57142251 (view UCSC Genome Browser custom track) | 
| Alignm length: | 591 | 
| Alignm identity: | 405 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 84, 240 | 
| Conread position: | 1-564 | 
| Cow position: | chr2:57334057-57334636 (view UCSC Genome Browser custom track) | 
| Alignm length: | 591 | 
| Alignm identity: | 401 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 84, 52 | 
| Conread position: | 1-564 | 
| Cow position: | chr2:59414813-59414244 (view UCSC Genome Browser custom track) | 
| Alignm length: | 591 | 
| Alignm identity: | 386 | 
| Alignm E-value: | 5.04467e-44 | 
| Alignm gaps (pig, cow): | 84, 289 | 
| Conread position: | 4-556 | 
| Cow position: | chr2:3729635-3730162 (view UCSC Genome Browser custom track) | 
| Alignm length: | 557 | 
| Alignm identity: | 370 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 293, 152 | 
| Conread position: | 5-564 | 
| Cow position: | chr2:20904225-20903702 (view UCSC Genome Browser custom track) | 
| Alignm length: | 566 | 
| Alignm identity: | 384 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 82, 100 | 
| Conread position: | 5-564 | 
| Cow position: | chr2:65939553-65939012 (view UCSC Genome Browser custom track) | 
| Alignm length: | 567 | 
| Alignm identity: | 387 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 13, 132 | 
| Conread position: | 6-536 | 
| Cow position: | chr2:49603616-49604137 (view UCSC Genome Browser custom track) | 
| Alignm length: | 537 | 
| Alignm identity: | 373 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 83, 225 | 
| Conread position: | 7-558 | 
| Cow position: | chr2:63293677-63293142 (view UCSC Genome Browser custom track) | 
| Alignm length: | 559 | 
| Alignm identity: | 377 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 79, 5 | 
| Conread position: | 7-563 | 
| Cow position: | chr2:47809910-47810446 (view UCSC Genome Browser custom track) | 
| Alignm length: | 564 | 
| Alignm identity: | 388 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 81, 141 | 
| Conread position: | 8-285 | 
| Cow position: | chr2:40963265-40962987 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 77, 191 | 
| Conread position: | 8-313 | 
| Cow position: | chr2:4621933-4621627 (view UCSC Genome Browser custom track) | 
| Alignm length: | 312 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 75, 40 | 
| Conread position: | 8-563 | 
| Cow position: | chr2:25031603-25031041 (view UCSC Genome Browser custom track) | 
| Alignm length: | 574 | 
| Alignm identity: | 396 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 163, 230 | 
| Conread position: | 8-564 | 
| Cow position: | chr2:2413933-2413361 (view UCSC Genome Browser custom track) | 
| Alignm length: | 582 | 
| Alignm identity: | 390 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 81, 267 | 
| Conread position: | 8-564 | 
| Cow position: | chr2:67421973-67421409 (view UCSC Genome Browser custom track) | 
| Alignm length: | 574 | 
| Alignm identity: | 391 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 163, 230 | 
| Conread position: | 9-564 | 
| Cow position: | chr2:32459125-32458572 (view UCSC Genome Browser custom track) | 
| Alignm length: | 568 | 
| Alignm identity: | 390 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 35, 134 | 
| Conread position: | 10-556 | 
| Cow position: | chr2:47604910-47604374 (view UCSC Genome Browser custom track) | 
| Alignm length: | 550 | 
| Alignm identity: | 393 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 284, 73 | 
| Conread position: | 10-564 | 
| Cow position: | chr2:6959634-6960181 (view UCSC Genome Browser custom track) | 
| Alignm length: | 560 | 
| Alignm identity: | 400 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 79, 165 | 
| Conread position: | 11-169 | 
| Cow position: | chr2:49470709-49470869 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 73, 125 | 
| Conread position: | 11-564 | 
| Cow position: | chr2:16899138-16899682 (view UCSC Genome Browser custom track) | 
| Alignm length: | 561 | 
| Alignm identity: | 387 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 78, 156 | 
| Conread position: | 11-564 | 
| Cow position: | chr2:80956775-80956201 (view UCSC Genome Browser custom track) | 
| Alignm length: | 583 | 
| Alignm identity: | 390 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 119, 72 | 
| Conread position: | 13-395 | 
| Cow position: | chr2:6879072-6879448 (view UCSC Genome Browser custom track) | 
| Alignm length: | 389 | 
| Alignm identity: | 285 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 53 | 
| Conread position: | 13-556 | 
| Cow position: | chr2:10733931-10733408 (view UCSC Genome Browser custom track) | 
| Alignm length: | 545 | 
| Alignm identity: | 386 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 304, 17 | 
| Conread position: | 13-558 | 
| Cow position: | chr2:8117135-8117682 (view UCSC Genome Browser custom track) | 
| Alignm length: | 564 | 
| Alignm identity: | 382 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 76, 160 | 
| Conread position: | 13-558 | 
| Cow position: | chr2:75250686-75251186 (view UCSC Genome Browser custom track) | 
| Alignm length: | 551 | 
| Alignm identity: | 391 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 102, 70 | 
| Conread position: | 16-162 | 
| Cow position: | chr2:52655017-52655168 (view UCSC Genome Browser custom track) | 
| Alignm length: | 152 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 58, 0 | 
| Conread position: | 16-440 | 
| Cow position: | chr2:28791957-28792369 (view UCSC Genome Browser custom track) | 
| Alignm length: | 431 | 
| Alignm identity: | 294 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 21 | 
| Conread position: | 16-453 | 
| Cow position: | chr2:36979000-36979430 (view UCSC Genome Browser custom track) | 
| Alignm length: | 445 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 157 | 
| Conread position: | 16-558 | 
| Cow position: | chr2:42672511-42671956 (view UCSC Genome Browser custom track) | 
| Alignm length: | 563 | 
| Alignm identity: | 391 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 267 | 
| Conread position: | 16-559 | 
| Cow position: | chr2:12225243-12224716 (view UCSC Genome Browser custom track) | 
| Alignm length: | 550 | 
| Alignm identity: | 375 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 136 | 
| Conread position: | 16-562 | 
| Cow position: | chr2:10187324-10186800 (view UCSC Genome Browser custom track) | 
| Alignm length: | 554 | 
| Alignm identity: | 377 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 157 | 
| Conread position: | 16-562 | 
| Cow position: | chr2:24921244-24921779 (view UCSC Genome Browser custom track) | 
| Alignm length: | 553 | 
| Alignm identity: | 384 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 151 | 
| Conread position: | 16-563 | 
| Cow position: | chr2:81255706-81256253 (view UCSC Genome Browser custom track) | 
| Alignm length: | 566 | 
| Alignm identity: | 391 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 18 | 
| Conread position: | 16-564 | 
| Cow position: | chr2:976367-975842 (view UCSC Genome Browser custom track) | 
| Alignm length: | 555 | 
| Alignm identity: | 381 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 157 | 
| Conread position: | 16-564 | 
| Cow position: | chr2:10269779-10269225 (view UCSC Genome Browser custom track) | 
| Alignm length: | 563 | 
| Alignm identity: | 383 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 257 | 
| Conread position: | 16-564 | 
| Cow position: | chr2:28651327-28650791 (view UCSC Genome Browser custom track) | 
| Alignm length: | 556 | 
| Alignm identity: | 382 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 125 | 
| Conread position: | 16-564 | 
| Cow position: | chr2:50984320-50983792 (view UCSC Genome Browser custom track) | 
| Alignm length: | 552 | 
| Alignm identity: | 385 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 21 | 
| Conread position: | 16-564 | 
| Cow position: | chr2:52061571-52062102 (view UCSC Genome Browser custom track) | 
| Alignm length: | 555 | 
| Alignm identity: | 379 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 157 | 
| Conread position: | 16-564 | 
| Cow position: | chr2:53328650-53329184 (view UCSC Genome Browser custom track) | 
| Alignm length: | 555 | 
| Alignm identity: | 386 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 52 | 
| Conread position: | 18-564 | 
| Cow position: | chr2:6877400-6877926 (view UCSC Genome Browser custom track) | 
| Alignm length: | 557 | 
| Alignm identity: | 404 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 64 | 
| Conread position: | 18-564 | 
| Cow position: | chr2:78761389-78761911 (view UCSC Genome Browser custom track) | 
| Alignm length: | 553 | 
| Alignm identity: | 393 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 71, 100 | 
| Conread position: | 19-564 | 
| Cow position: | chr2:41148962-41149479 (view UCSC Genome Browser custom track) | 
| Alignm length: | 551 | 
| Alignm identity: | 401 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 68, 14 | 
| Conread position: | 21-564 | 
| Cow position: | chr2:44345646-44346151 (view UCSC Genome Browser custom track) | 
| Alignm length: | 549 | 
| Alignm identity: | 373 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 13, 140 | 
| Conread position: | 26-564 | 
| Cow position: | chr2:56438808-56438284 (view UCSC Genome Browser custom track) | 
| Alignm length: | 546 | 
| Alignm identity: | 386 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 63, 103 | 
| Conread position: | 28-209 | 
| Cow position: | chr2:5871559-5871369 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 28-564 | 
| Cow position: | chr2:13046768-13046254 (view UCSC Genome Browser custom track) | 
| Alignm length: | 543 | 
| Alignm identity: | 371 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 145 | 
| Conread position: | 33-204 | 
| Cow position: | chr2:6773330-6773155 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 34, 0 | 
| Conread position: | 40-564 | 
| Cow position: | chr2:1491478-1490992 (view UCSC Genome Browser custom track) | 
| Alignm length: | 530 | 
| Alignm identity: | 366 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 47, 127 | 
| Conread position: | 46-564 | 
| Cow position: | chr2:45214328-45213820 (view UCSC Genome Browser custom track) | 
| Alignm length: | 525 | 
| Alignm identity: | 367 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 43, 119 | 
| Conread position: | 53-564 | 
| Cow position: | chr2:41685418-41685949 (view UCSC Genome Browser custom track) | 
| Alignm length: | 537 | 
| Alignm identity: | 368 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 26 | 
| Conread position: | 59-403 | 
| Cow position: | chr2:34567754-34567411 (view UCSC Genome Browser custom track) | 
| Alignm length: | 352 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 29, 48 | 
| Conread position: | 68-564 | 
| Cow position: | chr2:213303-212783 (view UCSC Genome Browser custom track) | 
| Alignm length: | 527 | 
| Alignm identity: | 347 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 103, 175 | 
| Conread position: | 68-564 | 
| Cow position: | chr2:72922869-72922396 (view UCSC Genome Browser custom track) | 
| Alignm length: | 501 | 
| Alignm identity: | 356 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 52 | 
| Conread position: | 74-253 | 
| Cow position: | chr2:28622095-28621919 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 9, 0 | 
| Conread position: | 84-386 | 
| Cow position: | chr2:74392401-74392106 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 147, 14 | 
| Conread position: | 84-564 | 
| Cow position: | chr2:85356785-85356334 (view UCSC Genome Browser custom track) | 
| Alignm length: | 481 | 
| Alignm identity: | 355 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 136, 0 | 
| Conread position: | 86-564 | 
| Cow position: | chr2:2357491-2357023 (view UCSC Genome Browser custom track) | 
| Alignm length: | 482 | 
| Alignm identity: | 352 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 207, 84 | 
| Conread position: | 102-563 | 
| Cow position: | chr2:24145267-24145710 (view UCSC Genome Browser custom track) | 
| Alignm length: | 466 | 
| Alignm identity: | 323 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 188, 62 | 
| Conread position: | 153-564 | 
| Cow position: | chr2:11160100-11159691 (view UCSC Genome Browser custom track) | 
| Alignm length: | 415 | 
| Alignm identity: | 266 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 143, 112 | 
| Conread position: | 173-564 | 
| Cow position: | chr2:5519944-5519552 (view UCSC Genome Browser custom track) | 
| Alignm length: | 395 | 
| Alignm identity: | 267 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 123, 93 | 
| Conread position: | 199-563 | 
| Cow position: | chr2:25889134-25888772 (view UCSC Genome Browser custom track) | 
| Alignm length: | 370 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 97, 63 | 
| Conread position: | 200-556 | 
| Cow position: | chr2:769313-768964 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 7e-26 | 
| Alignm gaps (pig, cow): | 98, 62 | 
| Conread position: | 204-563 | 
| Cow position: | chr2:5871248-5870899 (view UCSC Genome Browser custom track) | 
| Alignm length: | 363 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 113, 9 | 
| Conread position: | 204-564 | 
| Cow position: | chr2:5905770-5905412 (view UCSC Genome Browser custom track) | 
| Alignm length: | 364 | 
| Alignm identity: | 254 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 90, 12 | 
| Conread position: | 212-453 | 
| Cow position: | chr2:28644304-28644056 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 8e-27 | 
| Alignm gaps (pig, cow): | 25, 12 | 
| Conread position: | 212-558 | 
| Cow position: | chr2:20921686-20921353 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 105, 52 | 
| Conread position: | 213-564 | 
| Cow position: | chr2:283607-283257 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 83, 49 | 
| Conread position: | 227-490 | 
| Cow position: | chr2:15578552-15578294 (view UCSC Genome Browser custom track) | 
| Alignm length: | 267 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 67, 35 | 
| Conread position: | 229-564 | 
| Cow position: | chr2:52174199-52173882 (view UCSC Genome Browser custom track) | 
| Alignm length: | 338 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 88, 35 | 
| Conread position: | 244-560 | 
| Cow position: | chr2:50321415-50321727 (view UCSC Genome Browser custom track) | 
| Alignm length: | 325 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 48, 23 | 
| Conread position: | 258-460 | 
| Cow position: | chr2:80516202-80516402 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 58, 30 | 
| Conread position: | 258-558 | 
| Cow position: | chr2:52152723-52152421 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 211 | 
| Conread position: | 258-559 | 
| Cow position: | chr2:52655603-52655900 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 21 | 
| Conread position: | 258-564 | 
| Cow position: | chr2:4235314-4235612 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 43, 88 | 
| Conread position: | 258-564 | 
| Cow position: | chr2:11969623-11969326 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 59, 43 | 
| Conread position: | 258-564 | 
| Cow position: | chr2:41171825-41172123 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 130 | 
| Conread position: | 259-564 | 
| Cow position: | chr2:53474012-53473722 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 57, 119 | 
| Conread position: | 261-564 | 
| Cow position: | chr2:82166749-82167044 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 33, 186 | 
| Conread position: | 262-564 | 
| Cow position: | chr2:46945796-46946103 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 34, 212 | 
| Conread position: | 266-428 | 
| Cow position: | chr2:44166207-44166043 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 28, 102 | 
| Conread position: | 269-536 | 
| Cow position: | chr2:50076744-50077012 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 27, 200 | 
| Conread position: | 270-564 | 
| Cow position: | chr2:49471388-49471682 (view UCSC Genome Browser custom track) | 
| Alignm length: | 298 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 24, 105 | 
| Conread position: | 274-564 | 
| Cow position: | chr2:16077152-16076864 (view UCSC Genome Browser custom track) | 
| Alignm length: | 295 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 5.00264e-43 | 
| Alignm gaps (pig, cow): | 22, 192 | 
| Conread position: | 294-564 | 
| Cow position: | chr2:6772995-6772736 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 23, 111 | 
| Conread position: | 335-542 | 
| Cow position: | chr2:28621613-28621414 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 7e-26 | 
| Alignm gaps (pig, cow): | 30, 0 | 
| Conread position: | 360-564 | 
| Cow position: | chr2:37790910-37790717 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 160, 8 | 
| Conread position: | 368-495 | 
| Cow position: | chr2:6879949-6880071 (view UCSC Genome Browser custom track) | 
| Alignm length: | 128 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 16, 0 | 
| Conread position: | 377-564 | 
| Cow position: | chr2:10712180-10711994 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 43, 90 | 
| Conread position: | 381-559 | 
| Cow position: | chr2:4405093-4404917 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 85, 0 | 
| Conread position: | 392-564 | 
| Cow position: | chr2:34565661-34565491 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 8e-27 | 
| Alignm gaps (pig, cow): | 73, 0 | 
| Conread position: | 396-558 | 
| Cow position: | chr2:7901553-7901712 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 7e-26 | 
| Alignm gaps (pig, cow): | 48, 0 | 
| Conread position: | 397-564 | 
| Cow position: | chr2:26868547-26868709 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 117, 50 | 
| Conread position: | 418-564 | 
| Cow position: | chr2:40245351-40245494 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 48, 0 | 
Show alignments to all cow chromosomes.
