Cow genome map


           Conread name:
           raor023_p21.y1
        

               Conread position:
               1-146
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               1-162
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               1-266
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               194
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               64, 120
               

               Conread position:
               1-344
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               246
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               84, 240
               

               Conread position:
               1-424
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 107
               

               Conread position:
               1-450
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 289
               

               Conread position:
               1-516
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 229
               

               Conread position:
               1-557
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               373
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               85, 21
               

               Conread position:
               1-557
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 188
               

               Conread position:
               1-558
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               201, 89
               

               Conread position:
               1-558
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 17
               

               Conread position:
               1-562
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               201, 89
               

               Conread position:
               1-564
               

               Cow position:
               
               

               Alignm length:
               606
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 241
               

               Conread position:
               1-564
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               316, 83
               

               Conread position:
               1-564
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 233
               

               Conread position:
               1-564
               

               Cow position:
               
               

               Alignm length:
               587
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               170, 72
               

               Conread position:
               1-564
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               369
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               1-564
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 150
               

               Conread position:
               2-249
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               85, 206
               

               Conread position:
               4-563
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 175
               

               Conread position:
               5-222
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               177
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               87, 102
               

               Conread position:
               15-564
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 158
               

               Conread position:
               16-397
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               264
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               73, 157
               

               Conread position:
               16-407
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 96
               

               Conread position:
               16-473
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 157
               

               Conread position:
               16-550
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 157
               

               Conread position:
               16-564
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 157
               

               Conread position:
               16-564
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 157
               

               Conread position:
               16-564
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 111
               

               Conread position:
               16-564
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 157
               

               Conread position:
               16-564
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 151
               

               Conread position:
               16-564
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 131
               

               Conread position:
               19-557
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 71
               

               Conread position:
               26-162
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               126-564
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 14
               

               Conread position:
               173-442
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               197
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               121, 89
               

               Conread position:
               181-557
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               255
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               116, 7
               

               Conread position:
               196-564
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 67
               

               Conread position:
               199-520
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               208
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               92, 9
               

               Conread position:
               204-558
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               238
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               87, 47
               

               Conread position:
               214-564
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               239
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               26, 52
               

               Conread position:
               235-564
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 31
               

               Conread position:
               249-564
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               226
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               22, 107
               

               Conread position:
               258-558
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 192
               

               Conread position:
               258-564
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               259-536
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               35, 129
               

               Conread position:
               261-528
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               204
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               33, 159
               

               Conread position:
               266-558
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 42
               

               Conread position:
               335-562
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               18, 132
               

               Conread position:
               350-564
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               11, 117
               

               Conread position:
               352-562
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               377-564
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               407-564
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               63, 0
               
Show alignments to all cow chromosomes.