Cow genome map

Conread name: raor023_p21.y1

Conread position: 1-162
Cow position:
Alignm length: 166
Alignm identity: 122
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 63, 0

Conread position: 1-162
Cow position:
Alignm length: 165
Alignm identity: 125
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 85, 0

Conread position: 1-193
Cow position:
Alignm length: 196
Alignm identity: 148
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 89, 0

Conread position: 1-207
Cow position:
Alignm length: 207
Alignm identity: 151
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 81, 0

Conread position: 1-249
Cow position:
Alignm length: 256
Alignm identity: 173
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 86, 0

Conread position: 1-273
Cow position:
Alignm length: 277
Alignm identity: 188
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 45, 53

Conread position: 1-368
Cow position:
Alignm length: 375
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 209

Conread position: 1-375
Cow position:
Alignm length: 400
Alignm identity: 270
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 84, 47

Conread position: 1-395
Cow position:
Alignm length: 422
Alignm identity: 284
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 79, 289

Conread position: 1-500
Cow position:
Alignm length: 524
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 385

Conread position: 1-521
Cow position:
Alignm length: 526
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 111

Conread position: 1-529
Cow position:
Alignm length: 533
Alignm identity: 350
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 85, 165

Conread position: 1-558
Cow position:
Alignm length: 583
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 289

Conread position: 1-558
Cow position:
Alignm length: 559
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 87

Conread position: 1-558
Cow position:
Alignm length: 585
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 492

Conread position: 1-558
Cow position:
Alignm length: 585
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 39

Conread position: 1-558
Cow position:
Alignm length: 565
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 112

Conread position: 1-562
Cow position:
Alignm length: 583
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 237

Conread position: 1-564
Cow position:
Alignm length: 575
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 201

Conread position: 1-564
Cow position:
Alignm length: 589
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 288

Conread position: 1-564
Cow position:
Alignm length: 570
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 165

Conread position: 1-564
Cow position:
Alignm length: 596
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 61

Conread position: 1-564
Cow position:
Alignm length: 583
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 233

Conread position: 1-564
Cow position:
Alignm length: 588
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 289

Conread position: 1-564
Cow position:
Alignm length: 574
Alignm identity: 358
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 123, 73

Conread position: 1-564
Cow position:
Alignm length: 591
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 25

Conread position: 1-564
Cow position:
Alignm length: 591
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 289

Conread position: 1-564
Cow position:
Alignm length: 591
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 289

Conread position: 1-564
Cow position:
Alignm length: 573
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 175

Conread position: 1-564
Cow position:
Alignm length: 572
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 121

Conread position: 1-564
Cow position:
Alignm length: 589
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 243

Conread position: 3-184
Cow position:
Alignm length: 185
Alignm identity: 131
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 82, 0

Conread position: 3-543
Cow position:
Alignm length: 548
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 166

Conread position: 3-564
Cow position:
Alignm length: 569
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 170

Conread position: 4-428
Cow position:
Alignm length: 431
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 260

Conread position: 4-563
Cow position:
Alignm length: 567
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 69

Conread position: 4-564
Cow position:
Alignm length: 575
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 115

Conread position: 5-558
Cow position:
Alignm length: 560
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 25

Conread position: 7-564
Cow position:
Alignm length: 565
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 158

Conread position: 8-564
Cow position:
Alignm length: 584
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 272

Conread position: 12-556
Cow position:
Alignm length: 563
Alignm identity: 357
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 112, 59

Conread position: 13-463
Cow position:
Alignm length: 457
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 135

Conread position: 13-558
Cow position:
Alignm length: 553
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 154

Conread position: 13-564
Cow position:
Alignm length: 559
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 160

Conread position: 17-564
Cow position:
Alignm length: 551
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 77

Conread position: 18-564
Cow position:
Alignm length: 554
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 140

Conread position: 25-563
Cow position:
Alignm length: 545
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 148

Conread position: 26-409
Cow position:
Alignm length: 411
Alignm identity: 268
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 59, 264

Conread position: 40-564
Cow position:
Alignm length: 543
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 188

Conread position: 46-564
Cow position:
Alignm length: 527
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 121

Conread position: 50-557
Cow position:
Alignm length: 515
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 115

Conread position: 53-391
Cow position:
Alignm length: 347
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 106

Conread position: 153-564
Cow position:
Alignm length: 415
Alignm identity: 268
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 141, 113

Conread position: 160-564
Cow position:
Alignm length: 409
Alignm identity: 267
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 64, 94

Conread position: 182-564
Cow position:
Alignm length: 390
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 35

Conread position: 197-564
Cow position:
Alignm length: 380
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 264

Conread position: 204-542
Cow position:
Alignm length: 342
Alignm identity: 238
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 92, 61

Conread position: 235-564
Cow position:
Alignm length: 334
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 31

Conread position: 237-563
Cow position:
Alignm length: 338
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 317

Conread position: 241-558
Cow position:
Alignm length: 323
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 209

Conread position: 243-530
Cow position:
Alignm length: 300
Alignm identity: 199
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 21, 146

Conread position: 243-558
Cow position:
Alignm length: 319
Alignm identity: 205
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 67, 23

Conread position: 250-536
Cow position:
Alignm length: 290
Alignm identity: 213
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 44, 74

Conread position: 255-563
Cow position:
Alignm length: 314
Alignm identity: 216
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 12, 92

Conread position: 258-399
Cow position:
Alignm length: 143
Alignm identity: 112
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 59, 32

Conread position: 258-564
Cow position:
Alignm length: 319
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 218

Conread position: 258-564
Cow position:
Alignm length: 312
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 43

Conread position: 261-564
Cow position:
Alignm length: 307
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 10

Conread position: 271-564
Cow position:
Alignm length: 297
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 198

Conread position: 357-564
Cow position:
Alignm length: 211
Alignm identity: 152
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 10, 110

Conread position: 372-536
Cow position:
Alignm length: 165
Alignm identity: 121
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 74, 0

Conread position: 388-563
Cow position:
Alignm length: 178
Alignm identity: 134
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 115, 51

Conread position: 392-563
Cow position:
Alignm length: 172
Alignm identity: 128
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 20, 0

Show alignments to all cow chromosomes.