Cow genome map
Conread name: | raor023_p21.y1 |
Conread position: | 1-161 |
Cow position: | chr22:11029998-11030154 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 116 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 1-207 |
Cow position: | chr22:10077377-10077168 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 145 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 86, 126 |
Conread position: | 1-207 |
Cow position: | chr22:36272854-36273057 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 139 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 180, 0 |
Conread position: | 1-211 |
Cow position: | chr22:44353803-44353591 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 155 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 88, 198 |
Conread position: | 1-246 |
Cow position: | chr22:1318772-1319017 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 164 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 182, 208 |
Conread position: | 1-378 |
Cow position: | chr22:40380561-40380910 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 263 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 86, 166 |
Conread position: | 1-409 |
Cow position: | chr22:6020147-6020569 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 241 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 96, 196 |
Conread position: | 1-499 |
Cow position: | chr22:36534612-36534132 (view UCSC Genome Browser custom track) |
Alignm length: | 503 |
Alignm identity: | 363 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 247 |
Conread position: | 1-500 |
Cow position: | chr22:5307427-5307950 (view UCSC Genome Browser custom track) |
Alignm length: | 527 |
Alignm identity: | 372 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 83, 280 |
Conread position: | 1-506 |
Cow position: | chr22:42770915-42771388 (view UCSC Genome Browser custom track) |
Alignm length: | 510 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 24 |
Conread position: | 1-558 |
Cow position: | chr22:8136849-8136306 (view UCSC Genome Browser custom track) |
Alignm length: | 575 |
Alignm identity: | 392 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 295, 22 |
Conread position: | 1-558 |
Cow position: | chr22:44370303-44369730 (view UCSC Genome Browser custom track) |
Alignm length: | 585 |
Alignm identity: | 398 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 289 |
Conread position: | 1-562 |
Cow position: | chr22:327833-327262 (view UCSC Genome Browser custom track) |
Alignm length: | 587 |
Alignm identity: | 401 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 106, 93 |
Conread position: | 1-562 |
Cow position: | chr22:1285592-1285037 (view UCSC Genome Browser custom track) |
Alignm length: | 565 |
Alignm identity: | 413 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 292, 81 |
Conread position: | 1-563 |
Cow position: | chr22:37264767-37265349 (view UCSC Genome Browser custom track) |
Alignm length: | 590 |
Alignm identity: | 394 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 129, 237 |
Conread position: | 1-564 |
Cow position: | chr22:692953-693528 (view UCSC Genome Browser custom track) |
Alignm length: | 593 |
Alignm identity: | 403 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 112 |
Conread position: | 1-564 |
Cow position: | chr22:1878148-1878688 (view UCSC Genome Browser custom track) |
Alignm length: | 568 |
Alignm identity: | 378 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 84, 102 |
Conread position: | 1-564 |
Cow position: | chr22:3279038-3278457 (view UCSC Genome Browser custom track) |
Alignm length: | 591 |
Alignm identity: | 396 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 112 |
Conread position: | 1-564 |
Cow position: | chr22:3307377-3306836 (view UCSC Genome Browser custom track) |
Alignm length: | 569 |
Alignm identity: | 413 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 28 |
Conread position: | 1-564 |
Cow position: | chr22:5233986-5233409 (view UCSC Genome Browser custom track) |
Alignm length: | 591 |
Alignm identity: | 401 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 274 |
Conread position: | 1-564 |
Cow position: | chr22:5672105-5672633 (view UCSC Genome Browser custom track) |
Alignm length: | 568 |
Alignm identity: | 402 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 117 |
Conread position: | 1-564 |
Cow position: | chr22:6984565-6985151 (view UCSC Genome Browser custom track) |
Alignm length: | 590 |
Alignm identity: | 402 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 84, 240 |
Conread position: | 1-564 |
Cow position: | chr22:7276867-7277420 (view UCSC Genome Browser custom track) |
Alignm length: | 570 |
Alignm identity: | 382 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 266, 76 |
Conread position: | 1-564 |
Cow position: | chr22:10545961-10546541 (view UCSC Genome Browser custom track) |
Alignm length: | 591 |
Alignm identity: | 381 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 84, 289 |
Conread position: | 1-564 |
Cow position: | chr22:10910544-10909961 (view UCSC Genome Browser custom track) |
Alignm length: | 594 |
Alignm identity: | 398 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 292 |
Conread position: | 1-564 |
Cow position: | chr22:16199812-16200382 (view UCSC Genome Browser custom track) |
Alignm length: | 585 |
Alignm identity: | 393 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 176, 76 |
Conread position: | 1-564 |
Cow position: | chr22:18476450-18475870 (view UCSC Genome Browser custom track) |
Alignm length: | 592 |
Alignm identity: | 395 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 88, 190 |
Conread position: | 1-564 |
Cow position: | chr22:27310466-27309877 (view UCSC Genome Browser custom track) |
Alignm length: | 593 |
Alignm identity: | 398 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 219 |
Conread position: | 1-564 |
Cow position: | chr22:35673045-35672459 (view UCSC Genome Browser custom track) |
Alignm length: | 591 |
Alignm identity: | 397 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 84, 289 |
Conread position: | 1-564 |
Cow position: | chr22:39882815-39882280 (view UCSC Genome Browser custom track) |
Alignm length: | 565 |
Alignm identity: | 402 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 313, 83 |
Conread position: | 3-564 |
Cow position: | chr22:1320963-1321508 (view UCSC Genome Browser custom track) |
Alignm length: | 580 |
Alignm identity: | 422 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 149 |
Conread position: | 3-564 |
Cow position: | chr22:44489208-44489783 (view UCSC Genome Browser custom track) |
Alignm length: | 584 |
Alignm identity: | 397 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 275 |
Conread position: | 4-564 |
Cow position: | chr22:42990524-42991068 (view UCSC Genome Browser custom track) |
Alignm length: | 567 |
Alignm identity: | 378 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 85, 21 |
Conread position: | 5-199 |
Cow position: | chr22:46636641-46636445 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 148 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 84, 194 |
Conread position: | 7-553 |
Cow position: | chr22:1046735-1047262 (view UCSC Genome Browser custom track) |
Alignm length: | 554 |
Alignm identity: | 352 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 79, 159 |
Conread position: | 7-562 |
Cow position: | chr22:33350527-33351063 (view UCSC Genome Browser custom track) |
Alignm length: | 569 |
Alignm identity: | 368 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 22, 82 |
Conread position: | 7-564 |
Cow position: | chr22:309088-309612 (view UCSC Genome Browser custom track) |
Alignm length: | 564 |
Alignm identity: | 369 |
Alignm E-value: | 7.00005e-41 |
Alignm gaps (pig, cow): | 78, 108 |
Conread position: | 7-564 |
Cow position: | chr22:5933650-5933088 (view UCSC Genome Browser custom track) |
Alignm length: | 574 |
Alignm identity: | 378 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 85, 71 |
Conread position: | 8-564 |
Cow position: | chr22:24949147-24949726 (view UCSC Genome Browser custom track) |
Alignm length: | 584 |
Alignm identity: | 402 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 77, 282 |
Conread position: | 13-555 |
Cow position: | chr22:46585964-46585424 (view UCSC Genome Browser custom track) |
Alignm length: | 551 |
Alignm identity: | 375 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 137 |
Conread position: | 13-564 |
Cow position: | chr22:15850680-15851231 (view UCSC Genome Browser custom track) |
Alignm length: | 567 |
Alignm identity: | 407 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 24 |
Conread position: | 13-564 |
Cow position: | chr22:31312700-31313237 (view UCSC Genome Browser custom track) |
Alignm length: | 558 |
Alignm identity: | 382 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 153 |
Conread position: | 13-564 |
Cow position: | chr22:34167678-34168228 (view UCSC Genome Browser custom track) |
Alignm length: | 558 |
Alignm identity: | 380 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 15 |
Conread position: | 16-526 |
Cow position: | chr22:21588697-21589192 (view UCSC Genome Browser custom track) |
Alignm length: | 518 |
Alignm identity: | 362 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 157 |
Conread position: | 16-558 |
Cow position: | chr22:44456671-44457206 (view UCSC Genome Browser custom track) |
Alignm length: | 552 |
Alignm identity: | 375 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 89 |
Conread position: | 16-563 |
Cow position: | chr22:39470158-39469624 (view UCSC Genome Browser custom track) |
Alignm length: | 554 |
Alignm identity: | 390 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 157 |
Conread position: | 16-564 |
Cow position: | chr22:19144339-19143803 (view UCSC Genome Browser custom track) |
Alignm length: | 555 |
Alignm identity: | 387 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 157 |
Conread position: | 17-558 |
Cow position: | chr22:13772142-13772671 (view UCSC Genome Browser custom track) |
Alignm length: | 549 |
Alignm identity: | 387 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 254 |
Conread position: | 18-524 |
Cow position: | chr22:37073795-37073319 (view UCSC Genome Browser custom track) |
Alignm length: | 514 |
Alignm identity: | 364 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 5 |
Conread position: | 18-564 |
Cow position: | chr22:44933340-44933876 (view UCSC Genome Browser custom track) |
Alignm length: | 553 |
Alignm identity: | 379 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 125 |
Conread position: | 19-456 |
Cow position: | chr22:526549-526119 (view UCSC Genome Browser custom track) |
Alignm length: | 445 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 155 |
Conread position: | 19-564 |
Cow position: | chr22:1294139-1293600 (view UCSC Genome Browser custom track) |
Alignm length: | 553 |
Alignm identity: | 405 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 207 |
Conread position: | 20-400 |
Cow position: | chr22:36180495-36180879 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 263 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 9, 58 |
Conread position: | 25-343 |
Cow position: | chr22:27387023-27386709 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 219 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 64, 117 |
Conread position: | 25-564 |
Cow position: | chr22:561331-560809 (view UCSC Genome Browser custom track) |
Alignm length: | 546 |
Alignm identity: | 377 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 127 |
Conread position: | 25-564 |
Cow position: | chr22:17329369-17328843 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 382 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 116 |
Conread position: | 28-530 |
Cow position: | chr22:45880743-45880262 (view UCSC Genome Browser custom track) |
Alignm length: | 515 |
Alignm identity: | 372 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 20 |
Conread position: | 34-363 |
Cow position: | chr22:44609008-44609339 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 232 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 53, 189 |
Conread position: | 34-564 |
Cow position: | chr22:36736157-36736659 (view UCSC Genome Browser custom track) |
Alignm length: | 536 |
Alignm identity: | 385 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 178 |
Conread position: | 84-558 |
Cow position: | chr22:37131086-37131540 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 362 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 113 |
Conread position: | 95-307 |
Cow position: | chr22:48004099-48004308 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 156 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 187, 9 |
Conread position: | 105-564 |
Cow position: | chr22:1271058-1270614 (view UCSC Genome Browser custom track) |
Alignm length: | 471 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 189, 100 |
Conread position: | 105-564 |
Cow position: | chr22:6504209-6503768 (view UCSC Genome Browser custom track) |
Alignm length: | 467 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 212, 115 |
Conread position: | 121-429 |
Cow position: | chr22:12732601-12732308 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 223 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 80, 69 |
Conread position: | 131-564 |
Cow position: | chr22:118356-117919 (view UCSC Genome Browser custom track) |
Alignm length: | 448 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 16 |
Conread position: | 154-564 |
Cow position: | chr22:11030477-11030856 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 280 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 183-559 |
Cow position: | chr22:9657840-9658213 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 244 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 126, 161 |
Conread position: | 191-564 |
Cow position: | chr22:31335506-31335137 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 105, 38 |
Conread position: | 191-564 |
Cow position: | chr22:46636173-46635803 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 5 |
Conread position: | 205-564 |
Cow position: | chr22:44395321-44395677 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 89, 57 |
Conread position: | 213-543 |
Cow position: | chr22:44353401-44353072 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 83, 43 |
Conread position: | 223-501 |
Cow position: | chr22:41420128-41419855 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 200 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 71, 43 |
Conread position: | 250-564 |
Cow position: | chr22:36861949-36861634 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 219 |
Conread position: | 257-556 |
Cow position: | chr22:10077158-10076864 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 219 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 60, 30 |
Conread position: | 257-558 |
Cow position: | chr22:41474740-41474446 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 204 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 37, 87 |
Conread position: | 257-564 |
Cow position: | chr22:18816793-18816485 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 215 |
Alignm E-value: | 8.00141e-43 |
Alignm gaps (pig, cow): | 35, 150 |
Conread position: | 258-543 |
Cow position: | chr22:37067319-37067039 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 206 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 36, 48 |
Conread position: | 258-564 |
Cow position: | chr22:1318984-1319293 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 211 |
Conread position: | 258-564 |
Cow position: | chr22:46852932-46853238 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 219 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 36, 187 |
Conread position: | 271-564 |
Cow position: | chr22:158312-158006 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 269 |
Conread position: | 278-564 |
Cow position: | chr22:32485718-32485441 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 74 |
Conread position: | 295-564 |
Cow position: | chr22:4065269-4065537 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 192 |
Alignm E-value: | 6e-40 |
Alignm gaps (pig, cow): | 25, 57 |
Conread position: | 322-555 |
Cow position: | chr22:36267033-36267257 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 162 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 92, 133 |
Conread position: | 351-559 |
Cow position: | chr22:34598361-34598566 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 158 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 20, 61 |
Conread position: | 392-564 |
Cow position: | chr22:27283776-27283945 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 121 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 395-563 |
Cow position: | chr22:36183488-36183654 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 125 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 399-564 |
Cow position: | chr22:27386698-27386535 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 116 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 67, 0 |
Conread position: | 420-564 |
Cow position: | chr22:36274560-36274706 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 107 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 35, 0 |
Show alignments to all cow chromosomes.