Cow genome map

Conread name: raor023_p21.y1

Conread position: 1-161
Cow position:
Alignm length: 161
Alignm identity: 116
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 1-207
Cow position:
Alignm length: 211
Alignm identity: 145
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 86, 126

Conread position: 1-207
Cow position:
Alignm length: 207
Alignm identity: 139
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 180, 0

Conread position: 1-211
Cow position:
Alignm length: 214
Alignm identity: 155
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 88, 198

Conread position: 1-246
Cow position:
Alignm length: 249
Alignm identity: 164
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 182, 208

Conread position: 1-378
Cow position:
Alignm length: 382
Alignm identity: 263
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 86, 166

Conread position: 1-409
Cow position:
Alignm length: 425
Alignm identity: 241
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 96, 196

Conread position: 1-499
Cow position:
Alignm length: 503
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 247

Conread position: 1-500
Cow position:
Alignm length: 527
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 280

Conread position: 1-506
Cow position:
Alignm length: 510
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 24

Conread position: 1-558
Cow position:
Alignm length: 575
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 22

Conread position: 1-558
Cow position:
Alignm length: 585
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 289

Conread position: 1-562
Cow position:
Alignm length: 587
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 93

Conread position: 1-562
Cow position:
Alignm length: 565
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 81

Conread position: 1-563
Cow position:
Alignm length: 590
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 237

Conread position: 1-564
Cow position:
Alignm length: 593
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 112

Conread position: 1-564
Cow position:
Alignm length: 568
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 102

Conread position: 1-564
Cow position:
Alignm length: 591
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 112

Conread position: 1-564
Cow position:
Alignm length: 569
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 28

Conread position: 1-564
Cow position:
Alignm length: 591
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 274

Conread position: 1-564
Cow position:
Alignm length: 568
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 117

Conread position: 1-564
Cow position:
Alignm length: 590
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 240

Conread position: 1-564
Cow position:
Alignm length: 570
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 76

Conread position: 1-564
Cow position:
Alignm length: 591
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 289

Conread position: 1-564
Cow position:
Alignm length: 594
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 292

Conread position: 1-564
Cow position:
Alignm length: 585
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 76

Conread position: 1-564
Cow position:
Alignm length: 592
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 190

Conread position: 1-564
Cow position:
Alignm length: 593
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 219

Conread position: 1-564
Cow position:
Alignm length: 591
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 289

Conread position: 1-564
Cow position:
Alignm length: 565
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 83

Conread position: 3-564
Cow position:
Alignm length: 580
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 149

Conread position: 3-564
Cow position:
Alignm length: 584
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 275

Conread position: 4-564
Cow position:
Alignm length: 567
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 21

Conread position: 5-199
Cow position:
Alignm length: 198
Alignm identity: 148
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 84, 194

Conread position: 7-553
Cow position:
Alignm length: 554
Alignm identity: 352
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 79, 159

Conread position: 7-562
Cow position:
Alignm length: 569
Alignm identity: 368
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 22, 82

Conread position: 7-564
Cow position:
Alignm length: 564
Alignm identity: 369
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 78, 108

Conread position: 7-564
Cow position:
Alignm length: 574
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 71

Conread position: 8-564
Cow position:
Alignm length: 584
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 282

Conread position: 13-555
Cow position:
Alignm length: 551
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 137

Conread position: 13-564
Cow position:
Alignm length: 567
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 24

Conread position: 13-564
Cow position:
Alignm length: 558
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 153

Conread position: 13-564
Cow position:
Alignm length: 558
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 15

Conread position: 16-526
Cow position:
Alignm length: 518
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 157

Conread position: 16-558
Cow position:
Alignm length: 552
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 89

Conread position: 16-563
Cow position:
Alignm length: 554
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 157

Conread position: 16-564
Cow position:
Alignm length: 555
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 157

Conread position: 17-558
Cow position:
Alignm length: 549
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 254

Conread position: 18-524
Cow position:
Alignm length: 514
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 5

Conread position: 18-564
Cow position:
Alignm length: 553
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 125

Conread position: 19-456
Cow position:
Alignm length: 445
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 155

Conread position: 19-564
Cow position:
Alignm length: 553
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 207

Conread position: 20-400
Cow position:
Alignm length: 392
Alignm identity: 263
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 9, 58

Conread position: 25-343
Cow position:
Alignm length: 325
Alignm identity: 219
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 64, 117

Conread position: 25-564
Cow position:
Alignm length: 546
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 127

Conread position: 25-564
Cow position:
Alignm length: 545
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 116

Conread position: 28-530
Cow position:
Alignm length: 515
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 20

Conread position: 34-363
Cow position:
Alignm length: 338
Alignm identity: 232
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 53, 189

Conread position: 34-564
Cow position:
Alignm length: 536
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 178

Conread position: 84-558
Cow position:
Alignm length: 481
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 113

Conread position: 95-307
Cow position:
Alignm length: 216
Alignm identity: 156
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 187, 9

Conread position: 105-564
Cow position:
Alignm length: 471
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 100

Conread position: 105-564
Cow position:
Alignm length: 467
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 115

Conread position: 121-429
Cow position:
Alignm length: 313
Alignm identity: 223
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 80, 69

Conread position: 131-564
Cow position:
Alignm length: 448
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 16

Conread position: 154-564
Cow position:
Alignm length: 411
Alignm identity: 280
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 24, 0

Conread position: 183-559
Cow position:
Alignm length: 385
Alignm identity: 244
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 126, 161

Conread position: 191-564
Cow position:
Alignm length: 377
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 38

Conread position: 191-564
Cow position:
Alignm length: 379
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 5

Conread position: 205-564
Cow position:
Alignm length: 362
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 57

Conread position: 213-543
Cow position:
Alignm length: 334
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 43

Conread position: 223-501
Cow position:
Alignm length: 283
Alignm identity: 200
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 71, 43

Conread position: 250-564
Cow position:
Alignm length: 318
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 219

Conread position: 257-556
Cow position:
Alignm length: 305
Alignm identity: 219
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 60, 30

Conread position: 257-558
Cow position:
Alignm length: 308
Alignm identity: 204
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 37, 87

Conread position: 257-564
Cow position:
Alignm length: 311
Alignm identity: 215
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 35, 150

Conread position: 258-543
Cow position:
Alignm length: 290
Alignm identity: 206
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 36, 48

Conread position: 258-564
Cow position:
Alignm length: 311
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 211

Conread position: 258-564
Cow position:
Alignm length: 318
Alignm identity: 219
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 36, 187

Conread position: 271-564
Cow position:
Alignm length: 308
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 269

Conread position: 278-564
Cow position:
Alignm length: 290
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 74

Conread position: 295-564
Cow position:
Alignm length: 272
Alignm identity: 192
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 25, 57

Conread position: 322-555
Cow position:
Alignm length: 235
Alignm identity: 162
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 92, 133

Conread position: 351-559
Cow position:
Alignm length: 212
Alignm identity: 158
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 20, 61

Conread position: 392-564
Cow position:
Alignm length: 173
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 395-563
Cow position:
Alignm length: 169
Alignm identity: 125
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 28, 0

Conread position: 399-564
Cow position:
Alignm length: 166
Alignm identity: 116
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 420-564
Cow position:
Alignm length: 147
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 0

Show alignments to all cow chromosomes.