Cow genome map

Conread name: raor023_p21.y1

Conread position: 1-169
Cow position:
Alignm length: 169
Alignm identity: 126
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 87, 0

Conread position: 1-169
Cow position:
Alignm length: 172
Alignm identity: 124
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 84, 0

Conread position: 1-180
Cow position:
Alignm length: 182
Alignm identity: 126
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 104, 137

Conread position: 1-207
Cow position:
Alignm length: 211
Alignm identity: 147
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 84, 20

Conread position: 1-214
Cow position:
Alignm length: 217
Alignm identity: 159
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 86, 104

Conread position: 1-224
Cow position:
Alignm length: 227
Alignm identity: 160
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 86, 164

Conread position: 1-246
Cow position:
Alignm length: 255
Alignm identity: 172
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 26, 203

Conread position: 1-261
Cow position:
Alignm length: 270
Alignm identity: 193
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 86, 45

Conread position: 1-357
Cow position:
Alignm length: 361
Alignm identity: 251
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 88, 166

Conread position: 1-429
Cow position:
Alignm length: 454
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 258

Conread position: 1-490
Cow position:
Alignm length: 514
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 283

Conread position: 1-500
Cow position:
Alignm length: 513
Alignm identity: 330
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 84, 186

Conread position: 1-500
Cow position:
Alignm length: 510
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 222

Conread position: 1-532
Cow position:
Alignm length: 535
Alignm identity: 354
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 96, 24

Conread position: 1-551
Cow position:
Alignm length: 555
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 158

Conread position: 1-558
Cow position:
Alignm length: 567
Alignm identity: 361
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 42, 135

Conread position: 1-558
Cow position:
Alignm length: 587
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 219

Conread position: 1-562
Cow position:
Alignm length: 568
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 231

Conread position: 1-564
Cow position:
Alignm length: 592
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 289

Conread position: 1-564
Cow position:
Alignm length: 570
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 166

Conread position: 1-564
Cow position:
Alignm length: 593
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 258

Conread position: 1-564
Cow position:
Alignm length: 589
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 287

Conread position: 1-564
Cow position:
Alignm length: 569
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 54

Conread position: 1-564
Cow position:
Alignm length: 570
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 170

Conread position: 1-564
Cow position:
Alignm length: 582
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 119

Conread position: 1-564
Cow position:
Alignm length: 592
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 488

Conread position: 1-564
Cow position:
Alignm length: 591
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 290

Conread position: 1-564
Cow position:
Alignm length: 568
Alignm identity: 372
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 74, 84

Conread position: 3-420
Cow position:
Alignm length: 421
Alignm identity: 286
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 71, 81

Conread position: 3-562
Cow position:
Alignm length: 585
Alignm identity: 367
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 83, 40

Conread position: 3-564
Cow position:
Alignm length: 568
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 111

Conread position: 3-564
Cow position:
Alignm length: 569
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 249

Conread position: 8-409
Cow position:
Alignm length: 408
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 160

Conread position: 9-308
Cow position:
Alignm length: 305
Alignm identity: 207
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 81, 158

Conread position: 11-564
Cow position:
Alignm length: 567
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 17

Conread position: 13-564
Cow position:
Alignm length: 566
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 160

Conread position: 13-564
Cow position:
Alignm length: 565
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 73

Conread position: 15-556
Cow position:
Alignm length: 550
Alignm identity: 321
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 74, 137

Conread position: 16-414
Cow position:
Alignm length: 402
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 64

Conread position: 16-440
Cow position:
Alignm length: 431
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 157

Conread position: 16-564
Cow position:
Alignm length: 557
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 99

Conread position: 16-564
Cow position:
Alignm length: 555
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 136

Conread position: 26-541
Cow position:
Alignm length: 516
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 28-564
Cow position:
Alignm length: 553
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 147

Conread position: 28-564
Cow position:
Alignm length: 545
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 132

Conread position: 31-558
Cow position:
Alignm length: 539
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 134

Conread position: 34-564
Cow position:
Alignm length: 537
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 102

Conread position: 73-564
Cow position:
Alignm length: 517
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 215

Conread position: 143-500
Cow position:
Alignm length: 364
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 125

Conread position: 150-564
Cow position:
Alignm length: 418
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 98

Conread position: 150-564
Cow position:
Alignm length: 437
Alignm identity: 290
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 133, 18

Conread position: 157-564
Cow position:
Alignm length: 411
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 110

Conread position: 158-558
Cow position:
Alignm length: 405
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 10

Conread position: 164-540
Cow position:
Alignm length: 381
Alignm identity: 247
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 130, 33

Conread position: 182-563
Cow position:
Alignm length: 385
Alignm identity: 260
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 112, 38

Conread position: 185-563
Cow position:
Alignm length: 389
Alignm identity: 253
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 80, 165

Conread position: 190-457
Cow position:
Alignm length: 269
Alignm identity: 188
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 127, 22

Conread position: 203-564
Cow position:
Alignm length: 365
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 32

Conread position: 204-564
Cow position:
Alignm length: 366
Alignm identity: 240
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 121, 58

Conread position: 205-564
Cow position:
Alignm length: 367
Alignm identity: 233
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 21, 267

Conread position: 241-564
Cow position:
Alignm length: 333
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 65

Conread position: 251-564
Cow position:
Alignm length: 317
Alignm identity: 224
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 43, 116

Conread position: 258-563
Cow position:
Alignm length: 309
Alignm identity: 212
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 36, 89

Conread position: 258-564
Cow position:
Alignm length: 310
Alignm identity: 214
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 36, 211

Conread position: 261-501
Cow position:
Alignm length: 245
Alignm identity: 189
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 33, 107

Conread position: 319-564
Cow position:
Alignm length: 247
Alignm identity: 175
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 42, 32

Conread position: 319-564
Cow position:
Alignm length: 246
Alignm identity: 176
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 147, 0

Conread position: 412-564
Cow position:
Alignm length: 153
Alignm identity: 117
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 14, 0

Show alignments to all cow chromosomes.