Cow genome map
| Conread name: | raor023_p21.y1 |
| Conread position: | 1-154 |
| Cow position: | chr25:20777557-20777402 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 84, 150 |
| Conread position: | 1-169 |
| Cow position: | chr25:15443748-15443919 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 1-169 |
| Cow position: | chr25:32979682-32979511 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 1-249 |
| Cow position: | chr25:18411854-18411614 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 170, 62 |
| Conread position: | 1-432 |
| Cow position: | chr25:18172700-18173144 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 264 |
| Conread position: | 1-542 |
| Cow position: | chr25:13780422-13780948 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 176 |
| Conread position: | 1-558 |
| Cow position: | chr25:24171426-24171960 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 363 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 227, 42 |
| Conread position: | 1-563 |
| Cow position: | chr25:18061186-18060648 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 166 |
| Conread position: | 1-564 |
| Cow position: | chr25:11375947-11375409 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 24 |
| Conread position: | 1-564 |
| Cow position: | chr25:17469303-17468757 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 245 |
| Conread position: | 1-564 |
| Cow position: | chr25:18092400-18092957 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 47 |
| Conread position: | 1-564 |
| Cow position: | chr25:18276456-18275885 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 263 |
| Conread position: | 1-564 |
| Cow position: | chr25:19916445-19917022 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 96 |
| Conread position: | 1-564 |
| Cow position: | chr25:26921584-26922167 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 377 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 88, 219 |
| Conread position: | 1-564 |
| Cow position: | chr25:33991677-33991119 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 179 |
| Conread position: | 3-564 |
| Cow position: | chr25:18302162-18302729 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 74 |
| Conread position: | 4-563 |
| Cow position: | chr25:22146886-22147432 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 163 |
| Conread position: | 4-564 |
| Cow position: | chr25:8674318-8674854 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 149 |
| Conread position: | 4-564 |
| Cow position: | chr25:12760216-12759657 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 84 |
| Conread position: | 4-564 |
| Cow position: | chr25:18890616-18890076 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 45 |
| Conread position: | 5-562 |
| Cow position: | chr25:20493756-20494287 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 355 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 81, 162 |
| Conread position: | 8-564 |
| Cow position: | chr25:32579345-32579904 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 233 |
| Conread position: | 11-564 |
| Cow position: | chr25:35363056-35362484 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 279 |
| Conread position: | 16-564 |
| Cow position: | chr25:26866628-26867164 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 280, 88 |
| Conread position: | 17-564 |
| Cow position: | chr25:17561208-17560673 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 215 |
| Conread position: | 22-564 |
| Cow position: | chr25:26278681-26279204 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 11 |
| Conread position: | 25-525 |
| Cow position: | chr25:34014934-34014444 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 142 |
| Conread position: | 42-562 |
| Cow position: | chr25:11934112-11933589 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 262 |
| Conread position: | 45-562 |
| Cow position: | chr25:34347558-34347055 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 12 |
| Conread position: | 46-310 |
| Cow position: | chr25:36239659-36239911 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 14, 37 |
| Conread position: | 66-558 |
| Cow position: | chr25:14015611-14016105 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 21 |
| Conread position: | 74-564 |
| Cow position: | chr25:17590113-17589610 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 212 |
| Conread position: | 100-241 |
| Cow position: | chr25:34657492-34657351 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 102-564 |
| Cow position: | chr25:25506140-25506589 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 47 |
| Conread position: | 150-564 |
| Cow position: | chr25:20777372-20776959 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 116 |
| Conread position: | 151-564 |
| Cow position: | chr25:17563374-17562982 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 72 |
| Conread position: | 169-558 |
| Cow position: | chr25:33243420-33243791 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 263 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 30, 74 |
| Conread position: | 213-558 |
| Cow position: | chr25:18411692-18411353 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 43 |
| Conread position: | 258-564 |
| Cow position: | chr25:18027996-18027687 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 113 |
| Conread position: | 258-564 |
| Cow position: | chr25:20629209-20629516 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 211 |
| Conread position: | 267-465 |
| Cow position: | chr25:12943796-12943594 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 270-563 |
| Cow position: | chr25:34656801-34656507 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 199 |
| Conread position: | 359-564 |
| Cow position: | chr25:36240282-36240485 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 18, 96 |
Show alignments to all cow chromosomes.