Cow genome map
| Conread name: | raor023_p21.y1 |
| Conread position: | 1-202 |
| Cow position: | chr27:15331357-15331554 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 74, 18 |
| Conread position: | 1-218 |
| Cow position: | chr27:16431844-16432052 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 86, 150 |
| Conread position: | 1-224 |
| Cow position: | chr27:16438692-16438917 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 1-237 |
| Cow position: | chr27:25003154-25002924 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 85, 158 |
| Conread position: | 1-541 |
| Cow position: | chr27:25805532-25805008 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 27 |
| Conread position: | 1-563 |
| Cow position: | chr27:3997037-3996480 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 355 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 179, 88 |
| Conread position: | 1-564 |
| Cow position: | chr27:2364054-2364648 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 253 |
| Conread position: | 1-564 |
| Cow position: | chr27:15540653-15541225 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 81 |
| Conread position: | 1-564 |
| Cow position: | chr27:16035078-16034496 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 223 |
| Conread position: | 3-564 |
| Cow position: | chr27:26556640-26556087 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 225 |
| Conread position: | 4-564 |
| Cow position: | chr27:892562-893106 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 13 |
| Conread position: | 9-332 |
| Cow position: | chr27:5985746-5985427 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 224 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 78, 19 |
| Conread position: | 9-532 |
| Cow position: | chr27:25999698-25999194 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 278, 75 |
| Conread position: | 9-542 |
| Cow position: | chr27:25116602-25117118 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 7 |
| Conread position: | 11-564 |
| Cow position: | chr27:1208709-1209248 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 157 |
| Conread position: | 13-406 |
| Cow position: | chr27:11472036-11471652 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 268 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 76, 138 |
| Conread position: | 13-564 |
| Cow position: | chr27:9993835-9993309 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 52 |
| Conread position: | 16-542 |
| Cow position: | chr27:5910226-5910743 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 132 |
| Conread position: | 16-550 |
| Cow position: | chr27:13897561-13898080 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 280, 21 |
| Conread position: | 16-558 |
| Cow position: | chr27:23334523-23335054 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 151 |
| Conread position: | 16-564 |
| Cow position: | chr27:26324174-26324711 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 130 |
| Conread position: | 16-564 |
| Cow position: | chr27:27662253-27662798 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 157 |
| Conread position: | 28-564 |
| Cow position: | chr27:14461088-14460560 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 142 |
| Conread position: | 63-236 |
| Cow position: | chr27:15279220-15279044 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 24, 134 |
| Conread position: | 75-433 |
| Cow position: | chr27:16431881-16432240 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 254 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 19, 41 |
| Conread position: | 231-558 |
| Cow position: | chr27:5997180-5996840 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 86, 230 |
| Conread position: | 235-564 |
| Cow position: | chr27:25002964-25002634 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 20 |
| Conread position: | 253-562 |
| Cow position: | chr27:16438919-16439218 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 111 |
| Conread position: | 258-557 |
| Cow position: | chr27:27051254-27051554 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 211 |
| Conread position: | 258-558 |
| Cow position: | chr27:15278475-15278172 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 353-563 |
| Cow position: | chr27:26226988-26227190 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 28, 15 |
Show alignments to all cow chromosomes.