Cow genome map

Conread name: raor023_p21.y1

Conread position: 1-162
Cow position:
Alignm length: 165
Alignm identity: 122
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 86, 0

Conread position: 1-238
Cow position:
Alignm length: 250
Alignm identity: 177
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 45, 53

Conread position: 1-260
Cow position:
Alignm length: 265
Alignm identity: 174
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 84, 198

Conread position: 1-285
Cow position:
Alignm length: 292
Alignm identity: 193
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 88, 172

Conread position: 1-386
Cow position:
Alignm length: 393
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 124

Conread position: 1-403
Cow position:
Alignm length: 413
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 226

Conread position: 1-415
Cow position:
Alignm length: 441
Alignm identity: 300
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 84, 240

Conread position: 1-464
Cow position:
Alignm length: 469
Alignm identity: 302
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 83, 147

Conread position: 1-521
Cow position:
Alignm length: 545
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 270

Conread position: 1-536
Cow position:
Alignm length: 544
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 224

Conread position: 1-556
Cow position:
Alignm length: 560
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 166

Conread position: 1-558
Cow position:
Alignm length: 570
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 34

Conread position: 1-559
Cow position:
Alignm length: 567
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 42

Conread position: 1-559
Cow position:
Alignm length: 571
Alignm identity: 369
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 86, 112

Conread position: 1-562
Cow position:
Alignm length: 589
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 289

Conread position: 1-564
Cow position:
Alignm length: 596
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 278

Conread position: 1-564
Cow position:
Alignm length: 570
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 222

Conread position: 1-564
Cow position:
Alignm length: 583
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 208

Conread position: 1-564
Cow position:
Alignm length: 591
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 289

Conread position: 1-564
Cow position:
Alignm length: 567
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 230

Conread position: 1-564
Cow position:
Alignm length: 570
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 66

Conread position: 3-424
Cow position:
Alignm length: 425
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 81

Conread position: 3-558
Cow position:
Alignm length: 559
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 156

Conread position: 4-564
Cow position:
Alignm length: 568
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 9

Conread position: 4-564
Cow position:
Alignm length: 564
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 161

Conread position: 5-562
Cow position:
Alignm length: 565
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 244

Conread position: 6-553
Cow position:
Alignm length: 553
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 17

Conread position: 13-397
Cow position:
Alignm length: 391
Alignm identity: 265
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 76, 135

Conread position: 13-403
Cow position:
Alignm length: 397
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 170

Conread position: 13-556
Cow position:
Alignm length: 547
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 73

Conread position: 13-558
Cow position:
Alignm length: 553
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 129

Conread position: 13-562
Cow position:
Alignm length: 557
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 160

Conread position: 13-564
Cow position:
Alignm length: 558
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 114

Conread position: 16-398
Cow position:
Alignm length: 389
Alignm identity: 262
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 73, 157

Conread position: 16-406
Cow position:
Alignm length: 410
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 255

Conread position: 16-457
Cow position:
Alignm length: 447
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 126

Conread position: 16-558
Cow position:
Alignm length: 550
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 114

Conread position: 16-564
Cow position:
Alignm length: 556
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 157

Conread position: 16-564
Cow position:
Alignm length: 559
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 160

Conread position: 16-564
Cow position:
Alignm length: 556
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 132

Conread position: 16-564
Cow position:
Alignm length: 555
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 147

Conread position: 16-564
Cow position:
Alignm length: 555
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 130

Conread position: 16-564
Cow position:
Alignm length: 560
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 141

Conread position: 18-558
Cow position:
Alignm length: 547
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 155

Conread position: 18-558
Cow position:
Alignm length: 547
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 149

Conread position: 22-494
Cow position:
Alignm length: 482
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 52

Conread position: 25-558
Cow position:
Alignm length: 540
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 148

Conread position: 26-564
Cow position:
Alignm length: 544
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 8

Conread position: 28-564
Cow position:
Alignm length: 545
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 86

Conread position: 46-391
Cow position:
Alignm length: 352
Alignm identity: 235
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 43, 127

Conread position: 46-558
Cow position:
Alignm length: 517
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 43

Conread position: 46-564
Cow position:
Alignm length: 523
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 32

Conread position: 46-564
Cow position:
Alignm length: 525
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 93

Conread position: 90-403
Cow position:
Alignm length: 318
Alignm identity: 225
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 204, 74

Conread position: 182-564
Cow position:
Alignm length: 386
Alignm identity: 256
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 111, 73

Conread position: 253-564
Cow position:
Alignm length: 313
Alignm identity: 199
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 64, 40

Conread position: 258-403
Cow position:
Alignm length: 150
Alignm identity: 112
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 36, 127

Conread position: 258-558
Cow position:
Alignm length: 303
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 39

Conread position: 258-563
Cow position:
Alignm length: 310
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 204

Conread position: 258-564
Cow position:
Alignm length: 323
Alignm identity: 231
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 36, 187

Conread position: 265-558
Cow position:
Alignm length: 297
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 105

Conread position: 268-564
Cow position:
Alignm length: 300
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 173

Conread position: 274-564
Cow position:
Alignm length: 295
Alignm identity: 204
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 20, 73

Conread position: 293-564
Cow position:
Alignm length: 277
Alignm identity: 196
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 11, 56

Conread position: 322-543
Cow position:
Alignm length: 222
Alignm identity: 171
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 57, 0

Conread position: 323-530
Cow position:
Alignm length: 208
Alignm identity: 146
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 387-564
Cow position:
Alignm length: 178
Alignm identity: 136
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 79, 0

Conread position: 391-563
Cow position:
Alignm length: 173
Alignm identity: 130
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 393-564
Cow position:
Alignm length: 173
Alignm identity: 127
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 144, 73

Conread position: 394-564
Cow position:
Alignm length: 171
Alignm identity: 129
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 71, 0

Show alignments to all cow chromosomes.