Cow genome map
| Conread name: | raor023_p21.y1 |
| Conread position: | 1-158 |
| Cow position: | chr3:49013282-49013123 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 84, 150 |
| Conread position: | 1-162 |
| Cow position: | chr3:6781363-6781527 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 1-162 |
| Cow position: | chr3:31898669-31898508 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 84, 121 |
| Conread position: | 1-168 |
| Cow position: | chr3:48840889-48841059 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 1-169 |
| Cow position: | chr3:47616680-47616509 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 1-169 |
| Cow position: | chr3:56320128-56320296 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 82, 15 |
| Conread position: | 1-181 |
| Cow position: | chr3:471617-471800 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 1-238 |
| Cow position: | chr3:44255688-44255453 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 174 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 1-382 |
| Cow position: | chr3:7159538-7159137 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 262 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 170, 81 |
| Conread position: | 1-402 |
| Cow position: | chr3:66637331-66637711 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 213 |
| Conread position: | 1-499 |
| Cow position: | chr3:32623764-32623252 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 327 |
| Conread position: | 1-520 |
| Cow position: | chr3:19801693-19802204 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 8 |
| Conread position: | 1-524 |
| Cow position: | chr3:3053895-3054394 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 292, 51 |
| Conread position: | 1-524 |
| Cow position: | chr3:14440484-14439943 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 24 |
| Conread position: | 1-542 |
| Cow position: | chr3:46862059-46861495 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 36 |
| Conread position: | 1-543 |
| Cow position: | chr3:3979675-3980188 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 75 |
| Conread position: | 1-543 |
| Cow position: | chr3:19672027-19672573 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 84, 145 |
| Conread position: | 1-550 |
| Cow position: | chr3:32843155-32842618 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 42 |
| Conread position: | 1-556 |
| Cow position: | chr3:19692811-19692274 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 83 |
| Conread position: | 1-557 |
| Cow position: | chr3:55230411-55229876 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 167 |
| Conread position: | 1-558 |
| Cow position: | chr3:2633212-2633747 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 222 |
| Conread position: | 1-558 |
| Cow position: | chr3:2653398-2653926 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 92 |
| Conread position: | 1-558 |
| Cow position: | chr3:2916705-2917281 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 282 |
| Conread position: | 1-558 |
| Cow position: | chr3:31354958-31354438 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 153 |
| Conread position: | 1-558 |
| Cow position: | chr3:46678674-46678094 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 249 |
| Conread position: | 1-558 |
| Cow position: | chr3:66118948-66119475 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 88 |
| Conread position: | 1-559 |
| Cow position: | chr3:2909811-2909274 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 199 |
| Conread position: | 1-559 |
| Cow position: | chr3:54865439-54864878 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 376 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 57, 111 |
| Conread position: | 1-562 |
| Cow position: | chr3:6684730-6685283 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 213 |
| Conread position: | 1-564 |
| Cow position: | chr3:207867-207338 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 166 |
| Conread position: | 1-564 |
| Cow position: | chr3:3522253-3522839 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 289 |
| Conread position: | 1-564 |
| Cow position: | chr3:5047891-5047360 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 166 |
| Conread position: | 1-564 |
| Cow position: | chr3:5830335-5829804 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 102 |
| Conread position: | 1-564 |
| Cow position: | chr3:9716097-9716638 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 94 |
| Conread position: | 1-564 |
| Cow position: | chr3:14634814-14634287 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 62 |
| Conread position: | 1-564 |
| Cow position: | chr3:15989788-15989211 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 106 |
| Conread position: | 1-564 |
| Cow position: | chr3:22335139-22335717 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 265 |
| Conread position: | 1-564 |
| Cow position: | chr3:24313717-24314303 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 289 |
| Conread position: | 1-564 |
| Cow position: | chr3:34396759-34396228 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 135 |
| Conread position: | 1-564 |
| Cow position: | chr3:36099437-36098880 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 42 |
| Conread position: | 1-564 |
| Cow position: | chr3:36116905-36117500 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 265 |
| Conread position: | 1-564 |
| Cow position: | chr3:37968329-37968903 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 159 |
| Conread position: | 1-564 |
| Cow position: | chr3:39325971-39326512 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 100 |
| Conread position: | 1-564 |
| Cow position: | chr3:40340722-40340139 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 200 |
| Conread position: | 1-564 |
| Cow position: | chr3:41212509-41211913 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 500 |
| Conread position: | 1-564 |
| Cow position: | chr3:49614733-49614152 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 364 |
| Conread position: | 1-564 |
| Cow position: | chr3:49677021-49677583 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 260 |
| Conread position: | 1-564 |
| Cow position: | chr3:52865485-52864925 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 259 |
| Conread position: | 1-564 |
| Cow position: | chr3:63005888-63005324 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 232 |
| Conread position: | 1-564 |
| Cow position: | chr3:64028844-64028261 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 289 |
| Conread position: | 1-564 |
| Cow position: | chr3:64358899-64358341 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 167 |
| Conread position: | 1-564 |
| Cow position: | chr3:64649863-64650456 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 402 |
| Conread position: | 1-564 |
| Cow position: | chr3:72704436-72705022 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 331 |
| Conread position: | 2-363 |
| Cow position: | chr3:17950938-17951294 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 111 |
| Conread position: | 2-558 |
| Cow position: | chr3:18357598-18357067 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 366 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 65, 31 |
| Conread position: | 3-490 |
| Cow position: | chr3:24592334-24591861 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 102 |
| Conread position: | 6-564 |
| Cow position: | chr3:56650978-56650444 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 116 |
| Conread position: | 7-244 |
| Cow position: | chr3:27905987-27905756 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 68, 42 |
| Conread position: | 7-535 |
| Cow position: | chr3:69932678-69933193 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 167 |
| Conread position: | 7-543 |
| Cow position: | chr3:21946126-21945601 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 160 |
| Conread position: | 8-564 |
| Cow position: | chr3:47082397-47081833 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 114 |
| Conread position: | 9-564 |
| Cow position: | chr3:78028131-78027586 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 164 |
| Conread position: | 10-564 |
| Cow position: | chr3:42431504-42432055 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 116 |
| Conread position: | 11-536 |
| Cow position: | chr3:57485441-57484927 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 163 |
| Conread position: | 11-562 |
| Cow position: | chr3:19938168-19938736 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 46 |
| Conread position: | 12-564 |
| Cow position: | chr3:17829393-17828825 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 93 |
| Conread position: | 13-187 |
| Cow position: | chr3:50011695-50011872 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 13-496 |
| Cow position: | chr3:66618493-66618940 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 137 |
| Conread position: | 13-558 |
| Cow position: | chr3:38865691-38866220 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 161 |
| Conread position: | 13-558 |
| Cow position: | chr3:40822656-40823207 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 147 |
| Conread position: | 13-563 |
| Cow position: | chr3:34031612-34031075 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 135 |
| Conread position: | 13-563 |
| Cow position: | chr3:75041863-75041343 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 161 |
| Conread position: | 13-564 |
| Cow position: | chr3:10238937-10239473 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 118 |
| Conread position: | 13-564 |
| Cow position: | chr3:43040403-43039868 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 70 |
| Conread position: | 13-564 |
| Cow position: | chr3:59860648-59861190 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 161 |
| Conread position: | 13-564 |
| Cow position: | chr3:72629356-72629893 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 139 |
| Conread position: | 16-236 |
| Cow position: | chr3:57500239-57500012 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 16-377 |
| Cow position: | chr3:53515021-53515373 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 73, 137 |
| Conread position: | 16-463 |
| Cow position: | chr3:5996583-5996144 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 157 |
| Conread position: | 16-524 |
| Cow position: | chr3:30313819-30314341 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 265 |
| Conread position: | 16-536 |
| Cow position: | chr3:36882622-36882118 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 127 |
| Conread position: | 16-556 |
| Cow position: | chr3:56341150-56340607 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 37 |
| Conread position: | 16-558 |
| Cow position: | chr3:64018075-64017545 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 135 |
| Conread position: | 16-563 |
| Cow position: | chr3:23292117-23291582 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 145 |
| Conread position: | 16-564 |
| Cow position: | chr3:593886-594403 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 120 |
| Conread position: | 16-564 |
| Cow position: | chr3:2711668-2711136 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 41 |
| Conread position: | 16-564 |
| Cow position: | chr3:5882827-5883365 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 157 |
| Conread position: | 16-564 |
| Cow position: | chr3:5954881-5954362 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 135 |
| Conread position: | 16-564 |
| Cow position: | chr3:21183388-21182860 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 280, 131 |
| Conread position: | 16-564 |
| Cow position: | chr3:48061535-48061006 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 157 |
| Conread position: | 19-407 |
| Cow position: | chr3:46502311-46502704 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 255 |
| Conread position: | 21-465 |
| Cow position: | chr3:47273673-47273237 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 92 |
| Conread position: | 21-505 |
| Cow position: | chr3:30928978-30929456 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 316 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 54, 65 |
| Conread position: | 24-564 |
| Cow position: | chr3:42630296-42630839 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 351 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 62, 98 |
| Conread position: | 25-563 |
| Cow position: | chr3:18810800-18811326 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 150 |
| Conread position: | 25-564 |
| Cow position: | chr3:18543136-18542583 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 75 |
| Conread position: | 45-558 |
| Cow position: | chr3:49545852-49545357 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 107 |
| Conread position: | 46-558 |
| Cow position: | chr3:18729820-18729313 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 330 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 253, 37 |
| Conread position: | 53-386 |
| Cow position: | chr3:18464434-18464101 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 83 |
| Conread position: | 65-558 |
| Cow position: | chr3:50128537-50128061 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 33 |
| Conread position: | 121-558 |
| Cow position: | chr3:31898590-31898153 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 5 |
| Conread position: | 126-564 |
| Cow position: | chr3:45032135-45032566 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 13 |
| Conread position: | 143-429 |
| Cow position: | chr3:24359664-24359953 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 9, 125 |
| Conread position: | 143-564 |
| Cow position: | chr3:4285291-4285710 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 125 |
| Conread position: | 147-564 |
| Cow position: | chr3:19878073-19878487 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 70 |
| Conread position: | 150-564 |
| Cow position: | chr3:32146671-32146266 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 67 |
| Conread position: | 150-564 |
| Cow position: | chr3:66891542-66891137 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 101 |
| Conread position: | 173-564 |
| Cow position: | chr3:57856171-57856561 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 93 |
| Conread position: | 181-558 |
| Cow position: | chr3:49140961-49140593 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 116, 35 |
| Conread position: | 182-562 |
| Cow position: | chr3:48231524-48231172 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 38 |
| Conread position: | 188-510 |
| Cow position: | chr3:16072619-16072933 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 6, 56 |
| Conread position: | 192-564 |
| Cow position: | chr3:17936610-17936240 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 109, 64 |
| Conread position: | 195-559 |
| Cow position: | chr3:45775610-45775255 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 237 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 92, 67 |
| Conread position: | 204-564 |
| Cow position: | chr3:6781856-6782212 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 247 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 90, 62 |
| Conread position: | 205-564 |
| Cow position: | chr3:42580504-42580141 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 22 |
| Conread position: | 213-562 |
| Cow position: | chr3:60210690-60210355 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 110, 49 |
| Conread position: | 213-564 |
| Cow position: | chr3:36126878-36127215 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 49 |
| Conread position: | 241-557 |
| Cow position: | chr3:472053-472351 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 231 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 21, 115 |
| Conread position: | 243-564 |
| Cow position: | chr3:56320815-56321141 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 58, 117 |
| Conread position: | 251-556 |
| Cow position: | chr3:3805889-3806172 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 219 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 66, 42 |
| Conread position: | 258-494 |
| Cow position: | chr3:13513683-13513450 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 38, 111 |
| Conread position: | 258-556 |
| Cow position: | chr3:19943597-19943881 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 221 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 36, 110 |
| Conread position: | 258-564 |
| Cow position: | chr3:19757442-19757135 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 211 |
| Conread position: | 258-564 |
| Cow position: | chr3:36691672-36691368 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 216 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 38, 201 |
| Conread position: | 258-564 |
| Cow position: | chr3:70084118-70083821 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 38 |
| Conread position: | 258-564 |
| Cow position: | chr3:77474282-77474584 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 45 |
| Conread position: | 259-564 |
| Cow position: | chr3:53410449-53410741 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 266-564 |
| Cow position: | chr3:26949052-26949339 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 89, 27 |
| Conread position: | 267-562 |
| Cow position: | chr3:47179677-47179381 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 208 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 29, 202 |
| Conread position: | 299-542 |
| Cow position: | chr3:7168165-7168406 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 18, 156 |
| Conread position: | 307-564 |
| Cow position: | chr3:50914879-50915130 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 11, 54 |
| Conread position: | 330-564 |
| Cow position: | chr3:58947050-58947281 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 174 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 215, 105 |
| Conread position: | 344-564 |
| Cow position: | chr3:66990412-66990625 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 353-564 |
| Cow position: | chr3:7159127-7158906 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 372-558 |
| Cow position: | chr3:4026910-4027092 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 123, 72 |
| Conread position: | 373-563 |
| Cow position: | chr3:17951997-17952185 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 20, 9 |
| Conread position: | 373-564 |
| Cow position: | chr3:18463940-18463761 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 394-563 |
| Cow position: | chr3:66638396-66638563 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 72, 0 |
Show alignments to all cow chromosomes.