Cow genome map

Conread name: raor023_p21.y1

Conread position: 1-169
Cow position:
Alignm length: 172
Alignm identity: 128
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 76, 0

Conread position: 1-169
Cow position:
Alignm length: 172
Alignm identity: 122
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 84, 0

Conread position: 1-453
Cow position:
Alignm length: 475
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 71

Conread position: 1-543
Cow position:
Alignm length: 568
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 490

Conread position: 1-558
Cow position:
Alignm length: 563
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 83

Conread position: 1-563
Cow position:
Alignm length: 568
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 62

Conread position: 1-563
Cow position:
Alignm length: 574
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 55

Conread position: 1-564
Cow position:
Alignm length: 588
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 73

Conread position: 1-564
Cow position:
Alignm length: 590
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 218

Conread position: 1-564
Cow position:
Alignm length: 589
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 172

Conread position: 1-564
Cow position:
Alignm length: 592
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 130

Conread position: 1-564
Cow position:
Alignm length: 568
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 126

Conread position: 1-564
Cow position:
Alignm length: 590
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 288

Conread position: 1-564
Cow position:
Alignm length: 591
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 61

Conread position: 1-564
Cow position:
Alignm length: 603
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 249

Conread position: 1-564
Cow position:
Alignm length: 589
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 239

Conread position: 1-564
Cow position:
Alignm length: 577
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 198

Conread position: 1-564
Cow position:
Alignm length: 593
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 219

Conread position: 1-564
Cow position:
Alignm length: 568
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 247

Conread position: 2-542
Cow position:
Alignm length: 554
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 223

Conread position: 3-558
Cow position:
Alignm length: 559
Alignm identity: 348
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 334, 65

Conread position: 3-558
Cow position:
Alignm length: 567
Alignm identity: 359
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 83, 116

Conread position: 4-536
Cow position:
Alignm length: 542
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 23

Conread position: 7-392
Cow position:
Alignm length: 399
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 67

Conread position: 7-564
Cow position:
Alignm length: 566
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 204

Conread position: 7-564
Cow position:
Alignm length: 571
Alignm identity: 365
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 190, 15

Conread position: 8-446
Cow position:
Alignm length: 445
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 108

Conread position: 8-563
Cow position:
Alignm length: 590
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 293

Conread position: 13-500
Cow position:
Alignm length: 493
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 160

Conread position: 13-530
Cow position:
Alignm length: 523
Alignm identity: 337
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 288, 71

Conread position: 13-558
Cow position:
Alignm length: 553
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 124

Conread position: 13-564
Cow position:
Alignm length: 558
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 154

Conread position: 13-564
Cow position:
Alignm length: 559
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 136

Conread position: 16-162
Cow position:
Alignm length: 150
Alignm identity: 111
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 70, 42

Conread position: 16-446
Cow position:
Alignm length: 438
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 127

Conread position: 16-453
Cow position:
Alignm length: 446
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 151

Conread position: 16-473
Cow position:
Alignm length: 464
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 81

Conread position: 16-536
Cow position:
Alignm length: 527
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 151

Conread position: 16-562
Cow position:
Alignm length: 553
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 157

Conread position: 16-562
Cow position:
Alignm length: 554
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 157

Conread position: 16-564
Cow position:
Alignm length: 555
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 136

Conread position: 16-564
Cow position:
Alignm length: 554
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 157

Conread position: 16-564
Cow position:
Alignm length: 554
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 134

Conread position: 16-564
Cow position:
Alignm length: 555
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 159

Conread position: 16-564
Cow position:
Alignm length: 555
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 157

Conread position: 16-564
Cow position:
Alignm length: 555
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 157

Conread position: 16-564
Cow position:
Alignm length: 555
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 157

Conread position: 16-564
Cow position:
Alignm length: 552
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 73

Conread position: 16-564
Cow position:
Alignm length: 555
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 157

Conread position: 27-564
Cow position:
Alignm length: 546
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 148

Conread position: 28-564
Cow position:
Alignm length: 548
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 141

Conread position: 28-564
Cow position:
Alignm length: 546
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 147

Conread position: 30-564
Cow position:
Alignm length: 537
Alignm identity: 340
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 200, 44

Conread position: 40-564
Cow position:
Alignm length: 552
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 201

Conread position: 54-224
Cow position:
Alignm length: 174
Alignm identity: 136
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 33, 119

Conread position: 73-564
Cow position:
Alignm length: 498
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 100

Conread position: 90-564
Cow position:
Alignm length: 499
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 71

Conread position: 129-558
Cow position:
Alignm length: 433
Alignm identity: 281
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 19, 41

Conread position: 150-564
Cow position:
Alignm length: 417
Alignm identity: 274
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 144, 106

Conread position: 157-558
Cow position:
Alignm length: 404
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 31

Conread position: 184-558
Cow position:
Alignm length: 380
Alignm identity: 244
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 117, 82

Conread position: 191-526
Cow position:
Alignm length: 352
Alignm identity: 243
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 17, 45

Conread position: 191-556
Cow position:
Alignm length: 367
Alignm identity: 242
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 126, 38

Conread position: 213-564
Cow position:
Alignm length: 355
Alignm identity: 255
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 81, 9

Conread position: 214-564
Cow position:
Alignm length: 357
Alignm identity: 242
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 7, 54

Conread position: 253-564
Cow position:
Alignm length: 314
Alignm identity: 210
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 35, 48

Conread position: 258-471
Cow position:
Alignm length: 224
Alignm identity: 163
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 36, 0

Conread position: 258-564
Cow position:
Alignm length: 310
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 224

Conread position: 261-564
Cow position:
Alignm length: 306
Alignm identity: 181
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 57, 207

Conread position: 263-564
Cow position:
Alignm length: 305
Alignm identity: 211
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 31, 64

Conread position: 353-564
Cow position:
Alignm length: 213
Alignm identity: 152
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 16, 102

Conread position: 365-564
Cow position:
Alignm length: 201
Alignm identity: 157
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 153, 16

Conread position: 394-564
Cow position:
Alignm length: 173
Alignm identity: 130
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 86, 16

Show alignments to all cow chromosomes.