Cow genome map

Conread name: raor023_p21.y1

Conread position: 1-162
Cow position:
Alignm length: 165
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 85, 0

Conread position: 1-169
Cow position:
Alignm length: 172
Alignm identity: 124
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 84, 0

Conread position: 1-169
Cow position:
Alignm length: 172
Alignm identity: 124
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 84, 0

Conread position: 1-173
Cow position:
Alignm length: 176
Alignm identity: 127
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 84, 0

Conread position: 1-176
Cow position:
Alignm length: 180
Alignm identity: 130
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 84, 151

Conread position: 1-193
Cow position:
Alignm length: 196
Alignm identity: 141
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 86, 32

Conread position: 1-236
Cow position:
Alignm length: 236
Alignm identity: 163
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 89, 0

Conread position: 1-237
Cow position:
Alignm length: 241
Alignm identity: 169
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 86, 99

Conread position: 1-238
Cow position:
Alignm length: 241
Alignm identity: 179
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 86, 31

Conread position: 1-246
Cow position:
Alignm length: 250
Alignm identity: 168
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 88, 0

Conread position: 1-273
Cow position:
Alignm length: 279
Alignm identity: 192
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 63, 164

Conread position: 1-366
Cow position:
Alignm length: 368
Alignm identity: 248
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 78, 49

Conread position: 1-440
Cow position:
Alignm length: 447
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 147

Conread position: 1-452
Cow position:
Alignm length: 470
Alignm identity: 309
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 84, 331

Conread position: 1-463
Cow position:
Alignm length: 468
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 184

Conread position: 1-492
Cow position:
Alignm length: 518
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 293

Conread position: 1-516
Cow position:
Alignm length: 536
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 198

Conread position: 1-524
Cow position:
Alignm length: 526
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 51

Conread position: 1-524
Cow position:
Alignm length: 529
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 53

Conread position: 1-532
Cow position:
Alignm length: 535
Alignm identity: 325
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 301, 62

Conread position: 1-543
Cow position:
Alignm length: 570
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 289

Conread position: 1-550
Cow position:
Alignm length: 578
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 280

Conread position: 1-556
Cow position:
Alignm length: 560
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 166

Conread position: 1-558
Cow position:
Alignm length: 562
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 85

Conread position: 1-558
Cow position:
Alignm length: 563
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 138

Conread position: 1-558
Cow position:
Alignm length: 574
Alignm identity: 364
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 86, 10

Conread position: 1-558
Cow position:
Alignm length: 565
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 224

Conread position: 1-559
Cow position:
Alignm length: 563
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 53

Conread position: 1-562
Cow position:
Alignm length: 590
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 290

Conread position: 1-563
Cow position:
Alignm length: 592
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 120

Conread position: 1-563
Cow position:
Alignm length: 589
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 240

Conread position: 1-564
Cow position:
Alignm length: 587
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 370

Conread position: 1-564
Cow position:
Alignm length: 573
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 175

Conread position: 1-564
Cow position:
Alignm length: 591
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 172

Conread position: 1-564
Cow position:
Alignm length: 588
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 273

Conread position: 1-564
Cow position:
Alignm length: 591
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 240

Conread position: 1-564
Cow position:
Alignm length: 570
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 191

Conread position: 1-564
Cow position:
Alignm length: 592
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 290

Conread position: 1-564
Cow position:
Alignm length: 569
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 15

Conread position: 1-564
Cow position:
Alignm length: 571
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 22

Conread position: 1-564
Cow position:
Alignm length: 570
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 247

Conread position: 1-564
Cow position:
Alignm length: 568
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 153

Conread position: 1-564
Cow position:
Alignm length: 592
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 54

Conread position: 1-564
Cow position:
Alignm length: 575
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 32

Conread position: 1-564
Cow position:
Alignm length: 596
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 281

Conread position: 1-564
Cow position:
Alignm length: 590
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 249

Conread position: 1-564
Cow position:
Alignm length: 590
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 289

Conread position: 1-564
Cow position:
Alignm length: 588
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 23

Conread position: 1-564
Cow position:
Alignm length: 570
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 164

Conread position: 1-564
Cow position:
Alignm length: 588
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 76

Conread position: 1-564
Cow position:
Alignm length: 590
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 491

Conread position: 2-564
Cow position:
Alignm length: 570
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 165

Conread position: 3-556
Cow position:
Alignm length: 564
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 104

Conread position: 3-564
Cow position:
Alignm length: 566
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 40

Conread position: 3-564
Cow position:
Alignm length: 579
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 65

Conread position: 4-515
Cow position:
Alignm length: 518
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 171

Conread position: 4-564
Cow position:
Alignm length: 569
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 116

Conread position: 7-492
Cow position:
Alignm length: 490
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 174

Conread position: 8-559
Cow position:
Alignm length: 581
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 283

Conread position: 9-564
Cow position:
Alignm length: 563
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 137

Conread position: 9-564
Cow position:
Alignm length: 563
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 143

Conread position: 9-564
Cow position:
Alignm length: 559
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 73

Conread position: 11-499
Cow position:
Alignm length: 517
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 14

Conread position: 15-564
Cow position:
Alignm length: 557
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 153

Conread position: 16-524
Cow position:
Alignm length: 515
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 57

Conread position: 16-536
Cow position:
Alignm length: 527
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 21

Conread position: 16-555
Cow position:
Alignm length: 544
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 66

Conread position: 16-555
Cow position:
Alignm length: 546
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 136

Conread position: 16-558
Cow position:
Alignm length: 549
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 49

Conread position: 16-564
Cow position:
Alignm length: 555
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 157

Conread position: 16-564
Cow position:
Alignm length: 554
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 150

Conread position: 16-564
Cow position:
Alignm length: 555
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 50

Conread position: 16-564
Cow position:
Alignm length: 552
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 66

Conread position: 16-564
Cow position:
Alignm length: 555
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 157

Conread position: 16-564
Cow position:
Alignm length: 555
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 21

Conread position: 16-564
Cow position:
Alignm length: 553
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 108

Conread position: 16-564
Cow position:
Alignm length: 556
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 157

Conread position: 16-564
Cow position:
Alignm length: 555
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 151

Conread position: 19-564
Cow position:
Alignm length: 551
Alignm identity: 346
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 88, 38

Conread position: 21-337
Cow position:
Alignm length: 321
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 191

Conread position: 23-564
Cow position:
Alignm length: 570
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 400

Conread position: 25-564
Cow position:
Alignm length: 548
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 143

Conread position: 28-564
Cow position:
Alignm length: 551
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 120

Conread position: 36-532
Cow position:
Alignm length: 523
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 148

Conread position: 42-468
Cow position:
Alignm length: 433
Alignm identity: 281
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 58, 48

Conread position: 49-564
Cow position:
Alignm length: 521
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 55

Conread position: 94-531
Cow position:
Alignm length: 440
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 92

Conread position: 95-221
Cow position:
Alignm length: 127
Alignm identity: 101
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 129-560
Cow position:
Alignm length: 435
Alignm identity: 288
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 165, 64

Conread position: 143-564
Cow position:
Alignm length: 428
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 76

Conread position: 143-564
Cow position:
Alignm length: 427
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 112

Conread position: 150-564
Cow position:
Alignm length: 418
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 71

Conread position: 150-564
Cow position:
Alignm length: 424
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 117

Conread position: 166-564
Cow position:
Alignm length: 402
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 90

Conread position: 182-449
Cow position:
Alignm length: 271
Alignm identity: 154
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 112, 73

Conread position: 190-557
Cow position:
Alignm length: 378
Alignm identity: 240
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 46, 57

Conread position: 190-564
Cow position:
Alignm length: 377
Alignm identity: 249
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 95, 72

Conread position: 199-564
Cow position:
Alignm length: 370
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 67

Conread position: 230-564
Cow position:
Alignm length: 339
Alignm identity: 214
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 61, 33

Conread position: 243-558
Cow position:
Alignm length: 319
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 119

Conread position: 255-562
Cow position:
Alignm length: 313
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 118

Conread position: 257-564
Cow position:
Alignm length: 311
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 111

Conread position: 258-558
Cow position:
Alignm length: 305
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 201

Conread position: 258-564
Cow position:
Alignm length: 312
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 21

Conread position: 259-536
Cow position:
Alignm length: 286
Alignm identity: 200
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 35, 192

Conread position: 260-541
Cow position:
Alignm length: 285
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 209

Conread position: 278-558
Cow position:
Alignm length: 283
Alignm identity: 190
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 18, 14

Conread position: 282-562
Cow position:
Alignm length: 285
Alignm identity: 201
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 12, 79

Conread position: 306-564
Cow position:
Alignm length: 259
Alignm identity: 182
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 9, 0

Conread position: 349-564
Cow position:
Alignm length: 216
Alignm identity: 148
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 5, 0

Conread position: 350-564
Cow position:
Alignm length: 216
Alignm identity: 156
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 19, 117

Conread position: 352-550
Cow position:
Alignm length: 199
Alignm identity: 147
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 25, 0

Conread position: 353-564
Cow position:
Alignm length: 212
Alignm identity: 152
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 113, 0

Conread position: 372-533
Cow position:
Alignm length: 164
Alignm identity: 124
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 94, 9

Conread position: 390-564
Cow position:
Alignm length: 175
Alignm identity: 125
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 58, 0

Show alignments to all cow chromosomes.