Cow genome map

Conread name: raor023_p21.y1

Conread position: 1-162
Cow position: chr5:13607588-13607424 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 85, 0

Conread position: 1-169
Cow position: chr5:13384142-13383971 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 84, 0

Conread position: 1-169
Cow position: chr5:35298919-35299090 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 84, 0

Conread position: 1-173
Cow position: chr5:308441-308266 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 84, 0

Conread position: 1-176
Cow position: chr5:54936371-54936193 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 84, 151

Conread position: 1-193
Cow position: chr5:45699202-45699396 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 86, 32

Conread position: 1-236
Cow position: chr5:55150098-55149876 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 89, 0

Conread position: 1-237
Cow position: chr5:27569377-27569604 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 169
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 86, 99

Conread position: 1-238
Cow position: chr5:27652778-27652541 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 179
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 86, 31

Conread position: 1-246
Cow position: chr5:39165598-39165349 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 168
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 88, 0

Conread position: 1-273
Cow position: chr5:41551726-41551461 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 192
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 63, 164

Conread position: 1-366
Cow position: chr5:27060900-27060548 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 248
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 78, 49

Conread position: 1-440
Cow position: chr5:23688308-23687868 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 147

Conread position: 1-452
Cow position: chr5:42503902-42504369 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 309
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 84, 331

Conread position: 1-463
Cow position: chr5:41963759-41963307 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 184

Conread position: 1-492
Cow position: chr5:10444061-10443555 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 293

Conread position: 1-516
Cow position: chr5:10777106-10776577 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 198

Conread position: 1-524
Cow position: chr5:46631228-46630741 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 51

Conread position: 1-524
Cow position: chr5:52804528-52805020 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 53

Conread position: 1-532
Cow position: chr5:58056556-58056044 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 325
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 301, 62

Conread position: 1-543
Cow position: chr5:37756001-37755436 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 289

Conread position: 1-550
Cow position: chr5:18663384-18663957 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 280

Conread position: 1-556
Cow position: chr5:4384397-4384942 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 166

Conread position: 1-558
Cow position: chr5:23716778-23716233 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 85

Conread position: 1-558
Cow position: chr5:32945054-32945594 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 138

Conread position: 1-558
Cow position: chr5:56858527-56857977 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 364
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 86, 10

Conread position: 1-558
Cow position: chr5:61273998-61273462 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 224

Conread position: 1-559
Cow position: chr5:29008557-29009078 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 53

Conread position: 1-562
Cow position: chr5:27910131-27909549 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 290

Conread position: 1-563
Cow position: chr5:46658872-46659454 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 120

Conread position: 1-563
Cow position: chr5:53714394-53714976 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 240

Conread position: 1-564
Cow position: chr5:2530414-2530994 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 370

Conread position: 1-564
Cow position: chr5:2913619-2914174 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 175

Conread position: 1-564
Cow position: chr5:3963610-3964194 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 172

Conread position: 1-564
Cow position: chr5:4020057-4019475 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 273

Conread position: 1-564
Cow position: chr5:10844735-10844151 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 240

Conread position: 1-564
Cow position: chr5:12682332-12681794 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 191

Conread position: 1-564
Cow position: chr5:14379306-14379886 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 290

Conread position: 1-564
Cow position: chr5:23227438-23227979 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 15

Conread position: 1-564
Cow position: chr5:24329488-24330022 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 22

Conread position: 1-564
Cow position: chr5:26768993-26769534 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 247

Conread position: 1-564
Cow position: chr5:28030686-28031206 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 153

Conread position: 1-564
Cow position: chr5:31705716-31706298 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 54

Conread position: 1-564
Cow position: chr5:32674566-32674019 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 32

Conread position: 1-564
Cow position: chr5:32771615-32772205 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 281

Conread position: 1-564
Cow position: chr5:46663143-46663722 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 249

Conread position: 1-564
Cow position: chr5:47831955-47831381 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 289

Conread position: 1-564
Cow position: chr5:48469134-48468553 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 23

Conread position: 1-564
Cow position: chr5:49181478-49181999 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 164

Conread position: 1-564
Cow position: chr5:58195145-58195725 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 76

Conread position: 1-564
Cow position: chr5:59143918-59144505 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 491

Conread position: 2-564
Cow position: chr5:28006402-28006927 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 165

Conread position: 3-556
Cow position: chr5:41530401-41529856 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 104

Conread position: 3-564
Cow position: chr5:27488202-27488743 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 40

Conread position: 3-564
Cow position: chr5:49594302-49593732 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 65

Conread position: 4-515
Cow position: chr5:58747064-58747559 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 171

Conread position: 4-564
Cow position: chr5:1342623-1342070 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 116

Conread position: 7-492
Cow position: chr5:27000381-27000851 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 174

Conread position: 8-559
Cow position: chr5:46775237-46775807 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 283

Conread position: 9-564
Cow position: chr5:6159013-6158471 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 137

Conread position: 9-564
Cow position: chr5:48809530-48808992 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 143

Conread position: 9-564
Cow position: chr5:54793435-54792894 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 73

Conread position: 11-499
Cow position: chr5:23960959-23960451 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 14

Conread position: 15-564
Cow position: chr5:49120092-49119558 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 153

Conread position: 16-524
Cow position: chr5:55627192-55627684 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 57

Conread position: 16-536
Cow position: chr5:3785001-3785504 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 21

Conread position: 16-555
Cow position: chr5:7273057-7273576 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 66

Conread position: 16-555
Cow position: chr5:59281948-59282477 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 136

Conread position: 16-558
Cow position: chr5:64782827-64782299 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 49

Conread position: 16-564
Cow position: chr5:416534-415999 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 157

Conread position: 16-564
Cow position: chr5:2430945-2430409 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 150

Conread position: 16-564
Cow position: chr5:3505054-3504523 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 50

Conread position: 16-564
Cow position: chr5:4068180-4068713 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 66

Conread position: 16-564
Cow position: chr5:10917990-10918521 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 157

Conread position: 16-564
Cow position: chr5:24097841-24098372 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 21

Conread position: 16-564
Cow position: chr5:30578512-30579046 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 108

Conread position: 16-564
Cow position: chr5:34695772-34696308 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 157

Conread position: 16-564
Cow position: chr5:37731531-37732069 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 151

Conread position: 19-564
Cow position: chr5:76124357-76123828 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 346
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 88, 38

Conread position: 21-337
Cow position: chr5:29456813-29457121 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 191

Conread position: 23-564
Cow position: chr5:59481412-59481978 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 400

Conread position: 25-564
Cow position: chr5:57483346-57482823 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 143

Conread position: 28-564
Cow position: chr5:46739405-46738861 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 120

Conread position: 36-532
Cow position: chr5:26090651-26090134 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 148

Conread position: 42-468
Cow position: chr5:54619698-54620097 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 281
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 58, 48

Conread position: 49-564
Cow position: chr5:34202181-34202663 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 55

Conread position: 94-531
Cow position: chr5:6519162-6519577 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 92

Conread position: 95-221
Cow position: chr5:12901802-12901681 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 129-560
Cow position: chr5:46644004-46644419 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 288
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 165, 64

Conread position: 143-564
Cow position: chr5:24576216-24576637 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 76

Conread position: 143-564
Cow position: chr5:26079916-26079495 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 112

Conread position: 150-564
Cow position: chr5:45182781-45182386 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 71

Conread position: 150-564
Cow position: chr5:59059929-59060344 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 117

Conread position: 166-564
Cow position: chr5:18665288-18665685 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 90

Conread position: 182-449
Cow position: chr5:73489983-73489715 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 154
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 112, 73

Conread position: 190-557
Cow position: chr5:28570047-28570414 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 240
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 46, 57

Conread position: 190-564
Cow position: chr5:30088356-30087998 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 249
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 95, 72

Conread position: 199-564
Cow position: chr5:35299423-35299787 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 67

Conread position: 230-564
Cow position: chr5:51771948-51771623 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 214
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 61, 33

Conread position: 243-558
Cow position: chr5:41551521-41551208 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 119

Conread position: 255-562
Cow position: chr5:32733829-32733525 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 118

Conread position: 257-564
Cow position: chr5:9686990-9686690 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 111

Conread position: 258-558
Cow position: chr5:39165381-39165080 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 201

Conread position: 258-564
Cow position: chr5:45699698-45700007 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 21

Conread position: 259-536
Cow position: chr5:12644457-12644180 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 200
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 35, 192

Conread position: 260-541
Cow position: chr5:12185079-12185361 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 209

Conread position: 278-558
Cow position: chr5:29123356-29123081 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 190
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 18, 14

Conread position: 282-562
Cow position: chr5:31102152-31101874 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 201
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 12, 79

Conread position: 306-564
Cow position: chr5:54932749-54932494 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 182
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 9, 0

Conread position: 349-564
Cow position: chr5:46005872-46005660 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 148
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 5, 0

Conread position: 350-564
Cow position: chr5:44458993-44459206 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 19, 117

Conread position: 352-550
Cow position: chr5:27569670-27569860 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 25, 0

Conread position: 353-564
Cow position: chr5:29042026-29042235 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 113, 0

Conread position: 372-533
Cow position: chr5:57976885-57977047 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 94, 9

Conread position: 390-564
Cow position: chr5:25207187-25207019 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 58, 0

Show alignments to all cow chromosomes.