Cow genome map

Conread name: raor023_p21.y1

Conread position: 1-169
Cow position:
Alignm length: 172
Alignm identity: 122
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 84, 0

Conread position: 1-169
Cow position:
Alignm length: 172
Alignm identity: 124
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 84, 0

Conread position: 1-169
Cow position:
Alignm length: 172
Alignm identity: 122
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 84, 0

Conread position: 1-169
Cow position:
Alignm length: 171
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 29, 40

Conread position: 1-257
Cow position:
Alignm length: 260
Alignm identity: 180
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 86, 150

Conread position: 1-277
Cow position:
Alignm length: 285
Alignm identity: 189
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 84, 0

Conread position: 1-280
Cow position:
Alignm length: 282
Alignm identity: 188
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 74, 86

Conread position: 1-314
Cow position:
Alignm length: 319
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 222

Conread position: 1-370
Cow position:
Alignm length: 397
Alignm identity: 260
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 48, 199

Conread position: 1-378
Cow position:
Alignm length: 385
Alignm identity: 266
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 22, 34

Conread position: 1-458
Cow position:
Alignm length: 461
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 52

Conread position: 1-496
Cow position:
Alignm length: 500
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 121

Conread position: 1-500
Cow position:
Alignm length: 524
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 72

Conread position: 1-501
Cow position:
Alignm length: 519
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 171

Conread position: 1-510
Cow position:
Alignm length: 517
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 106

Conread position: 1-510
Cow position:
Alignm length: 515
Alignm identity: 330
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 291, 67

Conread position: 1-543
Cow position:
Alignm length: 570
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 172

Conread position: 1-558
Cow position:
Alignm length: 585
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 289

Conread position: 1-558
Cow position:
Alignm length: 584
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 235

Conread position: 1-558
Cow position:
Alignm length: 585
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 289

Conread position: 1-558
Cow position:
Alignm length: 565
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 90

Conread position: 1-558
Cow position:
Alignm length: 567
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 170

Conread position: 1-559
Cow position:
Alignm length: 563
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 51

Conread position: 1-562
Cow position:
Alignm length: 567
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 166

Conread position: 1-562
Cow position:
Alignm length: 584
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 56

Conread position: 1-563
Cow position:
Alignm length: 586
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 214

Conread position: 1-563
Cow position:
Alignm length: 573
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 187

Conread position: 1-563
Cow position:
Alignm length: 569
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 49

Conread position: 1-564
Cow position:
Alignm length: 570
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 186

Conread position: 1-564
Cow position:
Alignm length: 598
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 24

Conread position: 1-564
Cow position:
Alignm length: 591
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 289

Conread position: 1-564
Cow position:
Alignm length: 567
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 28

Conread position: 1-564
Cow position:
Alignm length: 590
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 479

Conread position: 1-564
Cow position:
Alignm length: 590
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 287

Conread position: 1-564
Cow position:
Alignm length: 591
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 29

Conread position: 1-564
Cow position:
Alignm length: 591
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 274

Conread position: 1-564
Cow position:
Alignm length: 592
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 289

Conread position: 1-564
Cow position:
Alignm length: 574
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 53

Conread position: 1-564
Cow position:
Alignm length: 567
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 15

Conread position: 1-564
Cow position:
Alignm length: 569
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 164

Conread position: 1-564
Cow position:
Alignm length: 579
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 169

Conread position: 1-564
Cow position:
Alignm length: 592
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 239

Conread position: 1-564
Cow position:
Alignm length: 591
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 218

Conread position: 1-564
Cow position:
Alignm length: 567
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 166

Conread position: 1-564
Cow position:
Alignm length: 568
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 188

Conread position: 3-156
Cow position:
Alignm length: 154
Alignm identity: 114
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 87, 0

Conread position: 3-415
Cow position:
Alignm length: 417
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 151

Conread position: 3-446
Cow position:
Alignm length: 452
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 172

Conread position: 4-397
Cow position:
Alignm length: 401
Alignm identity: 272
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 85, 177

Conread position: 4-536
Cow position:
Alignm length: 542
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 146

Conread position: 4-563
Cow position:
Alignm length: 593
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 217

Conread position: 4-564
Cow position:
Alignm length: 572
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 15

Conread position: 4-564
Cow position:
Alignm length: 569
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 44

Conread position: 5-563
Cow position:
Alignm length: 566
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 29

Conread position: 5-564
Cow position:
Alignm length: 587
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 19

Conread position: 9-558
Cow position:
Alignm length: 555
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 75

Conread position: 9-564
Cow position:
Alignm length: 565
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 28

Conread position: 9-564
Cow position:
Alignm length: 571
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 7

Conread position: 9-564
Cow position:
Alignm length: 562
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 167

Conread position: 13-361
Cow position:
Alignm length: 355
Alignm identity: 231
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 76, 154

Conread position: 13-564
Cow position:
Alignm length: 564
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 258

Conread position: 13-564
Cow position:
Alignm length: 564
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 135

Conread position: 13-564
Cow position:
Alignm length: 577
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 356

Conread position: 13-564
Cow position:
Alignm length: 557
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 135

Conread position: 13-564
Cow position:
Alignm length: 555
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 50

Conread position: 15-562
Cow position:
Alignm length: 554
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 158

Conread position: 16-341
Cow position:
Alignm length: 332
Alignm identity: 225
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 73, 136

Conread position: 16-385
Cow position:
Alignm length: 377
Alignm identity: 261
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 73, 126

Conread position: 16-403
Cow position:
Alignm length: 395
Alignm identity: 270
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 73, 65

Conread position: 16-562
Cow position:
Alignm length: 553
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 157

Conread position: 16-562
Cow position:
Alignm length: 553
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 157

Conread position: 16-562
Cow position:
Alignm length: 553
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 157

Conread position: 16-564
Cow position:
Alignm length: 555
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 125

Conread position: 16-564
Cow position:
Alignm length: 555
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 156

Conread position: 16-564
Cow position:
Alignm length: 555
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 151

Conread position: 16-564
Cow position:
Alignm length: 555
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 157

Conread position: 16-564
Cow position:
Alignm length: 555
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 111

Conread position: 16-564
Cow position:
Alignm length: 552
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 133

Conread position: 16-564
Cow position:
Alignm length: 563
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 52

Conread position: 16-564
Cow position:
Alignm length: 555
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 121

Conread position: 18-564
Cow position:
Alignm length: 554
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 155

Conread position: 20-556
Cow position:
Alignm length: 545
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 102

Conread position: 21-558
Cow position:
Alignm length: 546
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 154

Conread position: 24-389
Cow position:
Alignm length: 370
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 39

Conread position: 24-556
Cow position:
Alignm length: 540
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 140

Conread position: 27-491
Cow position:
Alignm length: 476
Alignm identity: 303
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 65

Conread position: 28-564
Cow position:
Alignm length: 543
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 145

Conread position: 33-488
Cow position:
Alignm length: 464
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 43

Conread position: 33-564
Cow position:
Alignm length: 543
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 82

Conread position: 45-558
Cow position:
Alignm length: 518
Alignm identity: 322
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 41, 105

Conread position: 46-562
Cow position:
Alignm length: 523
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 121

Conread position: 46-564
Cow position:
Alignm length: 525
Alignm identity: 340
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 40, 29

Conread position: 78-562
Cow position:
Alignm length: 491
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 95

Conread position: 82-543
Cow position:
Alignm length: 466
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 82

Conread position: 128-385
Cow position:
Alignm length: 261
Alignm identity: 171
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 158, 47

Conread position: 150-564
Cow position:
Alignm length: 419
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 46

Conread position: 182-559
Cow position:
Alignm length: 385
Alignm identity: 242
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 48, 30

Conread position: 182-564
Cow position:
Alignm length: 384
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 80

Conread position: 203-563
Cow position:
Alignm length: 362
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 32

Conread position: 206-409
Cow position:
Alignm length: 207
Alignm identity: 146
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 91, 14

Conread position: 208-564
Cow position:
Alignm length: 360
Alignm identity: 245
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 75, 32

Conread position: 225-564
Cow position:
Alignm length: 344
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 47

Conread position: 250-564
Cow position:
Alignm length: 324
Alignm identity: 219
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 89, 225

Conread position: 258-563
Cow position:
Alignm length: 309
Alignm identity: 217
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 36, 206

Conread position: 258-564
Cow position:
Alignm length: 310
Alignm identity: 214
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 36, 89

Conread position: 262-564
Cow position:
Alignm length: 306
Alignm identity: 219
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 32, 153

Conread position: 271-564
Cow position:
Alignm length: 297
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 198

Conread position: 299-558
Cow position:
Alignm length: 262
Alignm identity: 180
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 24, 166

Conread position: 328-563
Cow position:
Alignm length: 236
Alignm identity: 168
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 119, 0

Conread position: 328-564
Cow position:
Alignm length: 237
Alignm identity: 170
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 19, 0

Conread position: 332-558
Cow position:
Alignm length: 228
Alignm identity: 160
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 150, 85

Conread position: 376-558
Cow position:
Alignm length: 183
Alignm identity: 132
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 7, 0

Conread position: 399-564
Cow position:
Alignm length: 166
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 427-534
Cow position:
Alignm length: 108
Alignm identity: 87
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.