Cow genome map

Conread name: raor023_p21.y1

Conread position: 1-169
Cow position:
Alignm length: 172
Alignm identity: 128
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 84, 0

Conread position: 1-169
Cow position:
Alignm length: 172
Alignm identity: 124
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 84, 0

Conread position: 1-169
Cow position:
Alignm length: 172
Alignm identity: 124
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 84, 0

Conread position: 1-187
Cow position:
Alignm length: 191
Alignm identity: 134
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 72, 15

Conread position: 1-187
Cow position:
Alignm length: 191
Alignm identity: 135
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 34, 23

Conread position: 1-207
Cow position:
Alignm length: 212
Alignm identity: 146
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 84, 199

Conread position: 1-245
Cow position:
Alignm length: 246
Alignm identity: 177
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 231, 108

Conread position: 1-260
Cow position:
Alignm length: 271
Alignm identity: 189
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 86, 0

Conread position: 1-391
Cow position:
Alignm length: 395
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 247

Conread position: 1-402
Cow position:
Alignm length: 405
Alignm identity: 285
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 94, 24

Conread position: 1-492
Cow position:
Alignm length: 512
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 233

Conread position: 1-500
Cow position:
Alignm length: 524
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 198

Conread position: 1-536
Cow position:
Alignm length: 567
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 65

Conread position: 1-550
Cow position:
Alignm length: 574
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 50

Conread position: 1-558
Cow position:
Alignm length: 569
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 92

Conread position: 1-562
Cow position:
Alignm length: 589
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 240

Conread position: 1-562
Cow position:
Alignm length: 571
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 82

Conread position: 1-563
Cow position:
Alignm length: 567
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 169

Conread position: 1-563
Cow position:
Alignm length: 566
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 163

Conread position: 1-563
Cow position:
Alignm length: 573
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 23

Conread position: 1-564
Cow position:
Alignm length: 579
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 151

Conread position: 1-564
Cow position:
Alignm length: 591
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 279

Conread position: 1-564
Cow position:
Alignm length: 591
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 240

Conread position: 1-564
Cow position:
Alignm length: 591
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 289

Conread position: 1-564
Cow position:
Alignm length: 591
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 289

Conread position: 1-564
Cow position:
Alignm length: 591
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 289

Conread position: 1-564
Cow position:
Alignm length: 590
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 288

Conread position: 1-564
Cow position:
Alignm length: 591
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 240

Conread position: 3-167
Cow position:
Alignm length: 168
Alignm identity: 123
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 83, 0

Conread position: 3-249
Cow position:
Alignm length: 254
Alignm identity: 171
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 83, 100

Conread position: 3-509
Cow position:
Alignm length: 533
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 56

Conread position: 3-542
Cow position:
Alignm length: 547
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 171

Conread position: 3-564
Cow position:
Alignm length: 576
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 161

Conread position: 3-564
Cow position:
Alignm length: 569
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 8

Conread position: 4-555
Cow position:
Alignm length: 560
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 164

Conread position: 4-556
Cow position:
Alignm length: 559
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 220

Conread position: 4-564
Cow position:
Alignm length: 569
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 125

Conread position: 4-564
Cow position:
Alignm length: 561
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 7-564
Cow position:
Alignm length: 563
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 55

Conread position: 8-553
Cow position:
Alignm length: 551
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 55

Conread position: 9-543
Cow position:
Alignm length: 547
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 39

Conread position: 9-562
Cow position:
Alignm length: 561
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 165

Conread position: 9-564
Cow position:
Alignm length: 563
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 165

Conread position: 11-169
Cow position:
Alignm length: 162
Alignm identity: 117
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 78, 12

Conread position: 11-536
Cow position:
Alignm length: 533
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 15

Conread position: 11-564
Cow position:
Alignm length: 580
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 120

Conread position: 13-289
Cow position:
Alignm length: 282
Alignm identity: 192
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 71, 139

Conread position: 13-532
Cow position:
Alignm length: 540
Alignm identity: 349
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 59, 76

Conread position: 13-540
Cow position:
Alignm length: 534
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 118

Conread position: 13-559
Cow position:
Alignm length: 554
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 154

Conread position: 13-563
Cow position:
Alignm length: 573
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 167

Conread position: 13-564
Cow position:
Alignm length: 556
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 152

Conread position: 13-564
Cow position:
Alignm length: 559
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 160

Conread position: 15-564
Cow position:
Alignm length: 556
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 67

Conread position: 15-564
Cow position:
Alignm length: 557
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 124

Conread position: 16-415
Cow position:
Alignm length: 407
Alignm identity: 273
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 73, 157

Conread position: 16-530
Cow position:
Alignm length: 526
Alignm identity: 335
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 56, 37

Conread position: 16-536
Cow position:
Alignm length: 529
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 40

Conread position: 16-544
Cow position:
Alignm length: 533
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 157

Conread position: 16-558
Cow position:
Alignm length: 547
Alignm identity: 350
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 73, 151

Conread position: 16-558
Cow position:
Alignm length: 549
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 157

Conread position: 16-559
Cow position:
Alignm length: 559
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 157

Conread position: 16-564
Cow position:
Alignm length: 555
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 96

Conread position: 16-564
Cow position:
Alignm length: 555
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 9

Conread position: 16-564
Cow position:
Alignm length: 556
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 28

Conread position: 16-564
Cow position:
Alignm length: 555
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 157

Conread position: 16-564
Cow position:
Alignm length: 555
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 159

Conread position: 16-564
Cow position:
Alignm length: 557
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 158

Conread position: 16-564
Cow position:
Alignm length: 555
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 17

Conread position: 16-564
Cow position:
Alignm length: 555
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 126

Conread position: 17-162
Cow position:
Alignm length: 146
Alignm identity: 108
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 46, 0

Conread position: 25-564
Cow position:
Alignm length: 547
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 149

Conread position: 40-495
Cow position:
Alignm length: 478
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 326

Conread position: 42-564
Cow position:
Alignm length: 526
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 35

Conread position: 85-501
Cow position:
Alignm length: 418
Alignm identity: 262
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 232, 48

Conread position: 129-564
Cow position:
Alignm length: 443
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 11

Conread position: 143-564
Cow position:
Alignm length: 428
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 125

Conread position: 150-564
Cow position:
Alignm length: 419
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 116

Conread position: 151-564
Cow position:
Alignm length: 417
Alignm identity: 220
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 145, 124

Conread position: 161-562
Cow position:
Alignm length: 413
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 87

Conread position: 173-564
Cow position:
Alignm length: 394
Alignm identity: 268
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 121, 75

Conread position: 179-562
Cow position:
Alignm length: 385
Alignm identity: 247
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 6, 51

Conread position: 180-564
Cow position:
Alignm length: 390
Alignm identity: 250
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 26, 112

Conread position: 190-564
Cow position:
Alignm length: 380
Alignm identity: 261
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 108, 66

Conread position: 192-559
Cow position:
Alignm length: 374
Alignm identity: 250
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 116, 64

Conread position: 204-562
Cow position:
Alignm length: 361
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 50

Conread position: 204-564
Cow position:
Alignm length: 368
Alignm identity: 260
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 42, 23

Conread position: 204-564
Cow position:
Alignm length: 364
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 59

Conread position: 223-564
Cow position:
Alignm length: 342
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 224-564
Cow position:
Alignm length: 349
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 242

Conread position: 230-464
Cow position:
Alignm length: 247
Alignm identity: 177
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 24, 36

Conread position: 253-564
Cow position:
Alignm length: 317
Alignm identity: 227
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 43, 180

Conread position: 256-558
Cow position:
Alignm length: 308
Alignm identity: 211
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 36, 223

Conread position: 257-564
Cow position:
Alignm length: 313
Alignm identity: 217
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 38, 20

Conread position: 258-564
Cow position:
Alignm length: 308
Alignm identity: 216
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 59, 50

Conread position: 258-564
Cow position:
Alignm length: 316
Alignm identity: 221
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 36, 157

Conread position: 258-564
Cow position:
Alignm length: 322
Alignm identity: 227
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 38, 100

Conread position: 258-564
Cow position:
Alignm length: 311
Alignm identity: 218
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 37, 96

Conread position: 258-564
Cow position:
Alignm length: 310
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 99

Conread position: 260-564
Cow position:
Alignm length: 318
Alignm identity: 208
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 10, 212

Conread position: 261-485
Cow position:
Alignm length: 228
Alignm identity: 170
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 35, 118

Conread position: 261-524
Cow position:
Alignm length: 267
Alignm identity: 178
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 42, 99

Conread position: 266-564
Cow position:
Alignm length: 307
Alignm identity: 220
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 30, 191

Conread position: 267-524
Cow position:
Alignm length: 261
Alignm identity: 183
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 27, 87

Conread position: 269-564
Cow position:
Alignm length: 300
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 79

Conread position: 274-564
Cow position:
Alignm length: 296
Alignm identity: 210
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 22, 185

Conread position: 295-558
Cow position:
Alignm length: 267
Alignm identity: 184
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 23, 80

Conread position: 324-558
Cow position:
Alignm length: 239
Alignm identity: 161
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 65, 146

Conread position: 358-562
Cow position:
Alignm length: 205
Alignm identity: 149
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 108, 0

Conread position: 391-564
Cow position:
Alignm length: 174
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 392-564
Cow position:
Alignm length: 175
Alignm identity: 131
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 120, 55

Conread position: 395-564
Cow position:
Alignm length: 170
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 71, 0

Show alignments to all cow chromosomes.