Cow genome map
| Conread name: | raor032_o5.y1 |
| Conread position: | 5-268 |
| Cow position: | chr13:56292054-56291790 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 50, 57 |
| Conread position: | 6-292 |
| Cow position: | chr13:22125326-22125612 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 122, 104 |
| Conread position: | 6-292 |
| Cow position: | chr13:24163052-24163338 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 122, 104 |
| Conread position: | 7-312 |
| Cow position: | chr13:56292136-56291830 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 144, 137 |
| Conread position: | 7-367 |
| Cow position: | chr13:56333694-56334054 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 221 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 169, 164 |
| Conread position: | 7-402 |
| Cow position: | chr13:56292293-56291909 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 257 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 300, 93 |
| Conread position: | 7-403 |
| Cow position: | chr13:39984130-39984526 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 220 |
| Conread position: | 7-403 |
| Cow position: | chr13:39984214-39984610 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 320, 308 |
| Conread position: | 7-405 |
| Cow position: | chr13:39984466-39984864 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 62 |
| Conread position: | 7-407 |
| Cow position: | chr13:39984046-39984446 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 313, 301 |
| Conread position: | 7-407 |
| Cow position: | chr13:39984298-39984698 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 263 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 60, 51 |
| Conread position: | 8-436 |
| Cow position: | chr13:56292382-56291959 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 279 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 51, 166 |
| Conread position: | 11-225 |
| Cow position: | chr13:24162721-24162935 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 11-282 |
| Cow position: | chr13:39930882-39931153 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 11-292 |
| Cow position: | chr13:39930798-39931079 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 47, 52 |
| Conread position: | 11-406 |
| Cow position: | chr13:22124995-22125390 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 11-410 |
| Cow position: | chr13:39930630-39931029 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 253 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 297, 319 |
| Conread position: | 13-409 |
| Cow position: | chr13:22124827-22125225 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 19-405 |
| Cow position: | chr13:39983974-39984360 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 248 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 306, 296 |
| Conread position: | 31-401 |
| Cow position: | chr13:39983902-39984272 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 242 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 34, 27 |
| Conread position: | 43-435 |
| Cow position: | chr13:56292846-56292459 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 90, 76 |
| Conread position: | 49-410 |
| Cow position: | chr13:39930584-39930945 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 272, 281 |
| Conread position: | 85-406 |
| Cow position: | chr13:56333604-56333924 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 246, 223 |
| Conread position: | 90-436 |
| Cow position: | chr13:56333693-56334039 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 231 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 228, 219 |
Show alignments to all cow chromosomes.