Cow genome map

Conread name: raor032_o5.y1

Conread position: 1-285
Cow position:
Alignm length: 285
Alignm identity: 176
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-296
Cow position:
Alignm length: 296
Alignm identity: 194
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 216, 0

Conread position: 1-318
Cow position:
Alignm length: 318
Alignm identity: 211
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 314, 0

Conread position: 1-359
Cow position:
Alignm length: 361
Alignm identity: 230
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 64, 57

Conread position: 1-401
Cow position:
Alignm length: 405
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 57

Conread position: 1-402
Cow position:
Alignm length: 402
Alignm identity: 246
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 1-402
Cow position:
Alignm length: 403
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 57

Conread position: 1-406
Cow position:
Alignm length: 410
Alignm identity: 268
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 71, 91

Conread position: 1-409
Cow position:
Alignm length: 412
Alignm identity: 263
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 234, 240

Conread position: 1-433
Cow position:
Alignm length: 434
Alignm identity: 270
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 327, 334

Conread position: 2-290
Cow position:
Alignm length: 289
Alignm identity: 191
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 2-395
Cow position:
Alignm length: 397
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 56

Conread position: 2-396
Cow position:
Alignm length: 406
Alignm identity: 249
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 38, 42

Conread position: 2-396
Cow position:
Alignm length: 399
Alignm identity: 249
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 62, 56

Conread position: 2-401
Cow position:
Alignm length: 401
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 80

Conread position: 2-430
Cow position:
Alignm length: 429
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-431
Cow position:
Alignm length: 432
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 80

Conread position: 2-436
Cow position:
Alignm length: 438
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 56

Conread position: 2-436
Cow position:
Alignm length: 436
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 80

Conread position: 3-394
Cow position:
Alignm length: 394
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 322, 305

Conread position: 3-411
Cow position:
Alignm length: 411
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 152

Conread position: 3-437
Cow position:
Alignm length: 437
Alignm identity: 277
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 305, 325

Conread position: 4-236
Cow position:
Alignm length: 233
Alignm identity: 153
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 4-238
Cow position:
Alignm length: 235
Alignm identity: 152
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 4-296
Cow position:
Alignm length: 293
Alignm identity: 187
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 4-404
Cow position:
Alignm length: 403
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 64

Conread position: 4-404
Cow position:
Alignm length: 404
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 88

Conread position: 4-405
Cow position:
Alignm length: 404
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 325, 304

Conread position: 5-233
Cow position:
Alignm length: 230
Alignm identity: 157
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 60, 53

Conread position: 5-282
Cow position:
Alignm length: 280
Alignm identity: 178
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 75, 53

Conread position: 5-296
Cow position:
Alignm length: 292
Alignm identity: 191
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 5-395
Cow position:
Alignm length: 391
Alignm identity: 243
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 5-401
Cow position:
Alignm length: 397
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-403
Cow position:
Alignm length: 401
Alignm identity: 259
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 59, 53

Conread position: 5-404
Cow position:
Alignm length: 401
Alignm identity: 255
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 59, 53

Conread position: 5-404
Cow position:
Alignm length: 401
Alignm identity: 251
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 60, 53

Conread position: 5-404
Cow position:
Alignm length: 402
Alignm identity: 250
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 236, 66

Conread position: 5-407
Cow position:
Alignm length: 404
Alignm identity: 249
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 60, 53

Conread position: 5-407
Cow position:
Alignm length: 407
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 222

Conread position: 5-408
Cow position:
Alignm length: 405
Alignm identity: 238
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 293, 299

Conread position: 5-409
Cow position:
Alignm length: 405
Alignm identity: 254
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 5-409
Cow position:
Alignm length: 406
Alignm identity: 257
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 60, 53

Conread position: 5-409
Cow position:
Alignm length: 407
Alignm identity: 252
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 118, 102

Conread position: 5-409
Cow position:
Alignm length: 406
Alignm identity: 257
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 316, 104

Conread position: 5-409
Cow position:
Alignm length: 405
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-436
Cow position:
Alignm length: 434
Alignm identity: 272
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 60, 53

Conread position: 6-281
Cow position:
Alignm length: 276
Alignm identity: 170
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 6-301
Cow position:
Alignm length: 296
Alignm identity: 191
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 6-405
Cow position:
Alignm length: 401
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 83

Conread position: 6-408
Cow position:
Alignm length: 404
Alignm identity: 257
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 314, 302

Conread position: 6-434
Cow position:
Alignm length: 431
Alignm identity: 271
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 88, 96

Conread position: 7-365
Cow position:
Alignm length: 360
Alignm identity: 233
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 95, 87

Conread position: 7-395
Cow position:
Alignm length: 393
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 51

Conread position: 7-401
Cow position:
Alignm length: 396
Alignm identity: 249
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 37, 32

Conread position: 7-403
Cow position:
Alignm length: 400
Alignm identity: 256
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 68, 81

Conread position: 7-403
Cow position:
Alignm length: 399
Alignm identity: 250
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 288, 279

Conread position: 7-403
Cow position:
Alignm length: 398
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 81

Conread position: 7-405
Cow position:
Alignm length: 401
Alignm identity: 261
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 79, 51

Conread position: 7-405
Cow position:
Alignm length: 401
Alignm identity: 261
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 106, 100

Conread position: 7-406
Cow position:
Alignm length: 403
Alignm identity: 263
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 61, 51

Conread position: 7-406
Cow position:
Alignm length: 402
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 220

Conread position: 7-406
Cow position:
Alignm length: 401
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 323

Conread position: 7-406
Cow position:
Alignm length: 400
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 7-406
Cow position:
Alignm length: 400
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 7-408
Cow position:
Alignm length: 403
Alignm identity: 257
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 71, 81

Conread position: 7-409
Cow position:
Alignm length: 404
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 308

Conread position: 7-409
Cow position:
Alignm length: 405
Alignm identity: 262
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 75, 83

Conread position: 7-428
Cow position:
Alignm length: 424
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 51

Conread position: 7-429
Cow position:
Alignm length: 425
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 51

Conread position: 7-431
Cow position:
Alignm length: 425
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 7-431
Cow position:
Alignm length: 425
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 7-431
Cow position:
Alignm length: 426
Alignm identity: 267
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 76, 65

Conread position: 7-431
Cow position:
Alignm length: 426
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 82

Conread position: 7-434
Cow position:
Alignm length: 431
Alignm identity: 271
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 150, 169

Conread position: 7-436
Cow position:
Alignm length: 431
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 51

Conread position: 7-436
Cow position:
Alignm length: 433
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 68

Conread position: 7-436
Cow position:
Alignm length: 430
Alignm identity: 266
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 7-436
Cow position:
Alignm length: 430
Alignm identity: 269
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 11-309
Cow position:
Alignm length: 300
Alignm identity: 186
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 53, 47

Conread position: 11-392
Cow position:
Alignm length: 383
Alignm identity: 235
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 81, 69

Conread position: 11-402
Cow position:
Alignm length: 393
Alignm identity: 248
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 310, 321

Conread position: 11-404
Cow position:
Alignm length: 395
Alignm identity: 255
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 54, 47

Conread position: 11-409
Cow position:
Alignm length: 399
Alignm identity: 255
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 11-411
Cow position:
Alignm length: 403
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 78

Conread position: 11-411
Cow position:
Alignm length: 401
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 12-411
Cow position:
Alignm length: 401
Alignm identity: 243
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 323, 145

Conread position: 12-436
Cow position:
Alignm length: 427
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 46

Conread position: 13-273
Cow position:
Alignm length: 261
Alignm identity: 166
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 13-406
Cow position:
Alignm length: 395
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 291

Conread position: 13-406
Cow position:
Alignm length: 395
Alignm identity: 256
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 315, 295

Conread position: 13-406
Cow position:
Alignm length: 395
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 295

Conread position: 13-429
Cow position:
Alignm length: 418
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 302

Conread position: 14-281
Cow position:
Alignm length: 268
Alignm identity: 187
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 14-405
Cow position:
Alignm length: 393
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 44

Conread position: 15-436
Cow position:
Alignm length: 423
Alignm identity: 257
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 53, 77

Conread position: 16-431
Cow position:
Alignm length: 416
Alignm identity: 263
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 16-431
Cow position:
Alignm length: 416
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 17-300
Cow position:
Alignm length: 286
Alignm identity: 190
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 52, 57

Conread position: 17-404
Cow position:
Alignm length: 389
Alignm identity: 244
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 158, 153

Conread position: 17-404
Cow position:
Alignm length: 389
Alignm identity: 251
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 158, 153

Conread position: 17-408
Cow position:
Alignm length: 393
Alignm identity: 239
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 311, 291

Conread position: 17-408
Cow position:
Alignm length: 396
Alignm identity: 251
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 61, 72

Conread position: 17-410
Cow position:
Alignm length: 395
Alignm identity: 241
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 302, 308

Conread position: 17-431
Cow position:
Alignm length: 416
Alignm identity: 263
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 47, 41

Conread position: 17-431
Cow position:
Alignm length: 417
Alignm identity: 256
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 68, 85

Conread position: 17-433
Cow position:
Alignm length: 418
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 235

Conread position: 17-434
Cow position:
Alignm length: 419
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 75

Conread position: 17-435
Cow position:
Alignm length: 421
Alignm identity: 267
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 311, 304

Conread position: 17-435
Cow position:
Alignm length: 420
Alignm identity: 263
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 58, 71

Conread position: 18-401
Cow position:
Alignm length: 385
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 290

Conread position: 18-401
Cow position:
Alignm length: 385
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 290

Conread position: 18-408
Cow position:
Alignm length: 392
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 290

Conread position: 18-410
Cow position:
Alignm length: 394
Alignm identity: 237
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 313, 289

Conread position: 19-404
Cow position:
Alignm length: 388
Alignm identity: 234
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 311, 288

Conread position: 19-411
Cow position:
Alignm length: 393
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 19-431
Cow position:
Alignm length: 416
Alignm identity: 267
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 53, 70

Conread position: 24-409
Cow position:
Alignm length: 390
Alignm identity: 253
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 40, 34

Conread position: 28-431
Cow position:
Alignm length: 404
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 29-405
Cow position:
Alignm length: 377
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 0

Conread position: 29-420
Cow position:
Alignm length: 398
Alignm identity: 245
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 8, 61

Conread position: 79-409
Cow position:
Alignm length: 331
Alignm identity: 208
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 82-436
Cow position:
Alignm length: 356
Alignm identity: 232
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 166, 154

Conread position: 91-403
Cow position:
Alignm length: 314
Alignm identity: 199
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 234, 216

Conread position: 91-434
Cow position:
Alignm length: 345
Alignm identity: 231
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 148, 161

Conread position: 92-405
Cow position:
Alignm length: 316
Alignm identity: 198
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 26, 13

Conread position: 103-405
Cow position:
Alignm length: 303
Alignm identity: 206
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 112-408
Cow position:
Alignm length: 297
Alignm identity: 200
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 113-314
Cow position:
Alignm length: 203
Alignm identity: 137
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 10, 164

Conread position: 119-409
Cow position:
Alignm length: 291
Alignm identity: 184
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 181-395
Cow position:
Alignm length: 216
Alignm identity: 145
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 31, 26

Conread position: 187-431
Cow position:
Alignm length: 246
Alignm identity: 166
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 133, 47

Conread position: 191-409
Cow position:
Alignm length: 221
Alignm identity: 149
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 114, 107

Show alignments to all cow chromosomes.