Cow genome map
| Conread name: | raor032_o5.y1 |
| Conread position: | 1-301 |
| Cow position: | chr17:22451902-22451602 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 81, 71 |
| Conread position: | 1-391 |
| Cow position: | chr17:22473561-22473952 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 324, 313 |
| Conread position: | 1-403 |
| Cow position: | chr17:22499168-22498766 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 81 |
| Conread position: | 1-404 |
| Cow position: | chr17:22590211-22589808 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 335 |
| Conread position: | 1-405 |
| Cow position: | chr17:22473309-22473713 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 243, 235 |
| Conread position: | 1-430 |
| Cow position: | chr17:22590043-22589614 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 325, 314 |
| Conread position: | 1-431 |
| Cow position: | chr17:22452238-22451808 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 144 |
| Conread position: | 1-431 |
| Cow position: | chr17:22553045-22552615 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-433 |
| Cow position: | chr17:22452154-22451722 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 57 |
| Conread position: | 1-436 |
| Cow position: | chr17:22552457-22552022 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 330, 314 |
| Conread position: | 1-436 |
| Cow position: | chr17:22590295-22589860 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 57 |
| Conread position: | 2-401 |
| Cow position: | chr17:22452069-22451669 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 247, 235 |
| Conread position: | 2-403 |
| Cow position: | chr17:22473226-22473627 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 37 |
| Conread position: | 2-433 |
| Cow position: | chr17:22589706-22589275 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-436 |
| Cow position: | chr17:22589874-22589440 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 268 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-436 |
| Cow position: | chr17:22552284-22551854 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 52 |
| Conread position: | 7-312 |
| Cow position: | chr17:22498742-22498448 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 206, 0 |
| Conread position: | 7-379 |
| Cow position: | chr17:22498910-22498538 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 313, 302 |
| Conread position: | 7-380 |
| Cow position: | chr17:22551863-22551490 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 242 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 312, 323 |
| Conread position: | 7-395 |
| Cow position: | chr17:22499330-22498942 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 282, 269 |
| Conread position: | 7-405 |
| Cow position: | chr17:22499246-22498848 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 254 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 298, 291 |
| Conread position: | 7-410 |
| Cow position: | chr17:22552619-22552216 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-410 |
| Cow position: | chr17:22552787-22552384 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 51 |
| Conread position: | 7-431 |
| Cow position: | chr17:22552115-22551691 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 51 |
| Conread position: | 7-431 |
| Cow position: | chr17:22590121-22589697 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-436 |
| Cow position: | chr17:22452316-22451887 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 220 |
| Conread position: | 7-436 |
| Cow position: | chr17:22473483-22473912 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-436 |
| Cow position: | chr17:22499078-22498649 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 270 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 76, 51 |
| Conread position: | 7-436 |
| Cow position: | chr17:22552031-22551602 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 275 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 320, 308 |
| Conread position: | 7-436 |
| Cow position: | chr17:22552703-22552274 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 271 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 298, 291 |
| Conread position: | 7-436 |
| Cow position: | chr17:22552955-22552526 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 296, 291 |
| Conread position: | 10-406 |
| Cow position: | chr17:22452396-22452001 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 10 |
| Conread position: | 11-409 |
| Cow position: | chr17:22552195-22551797 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 319, 304 |
| Conread position: | 11-428 |
| Cow position: | chr17:22589949-22589532 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 268 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 399, 395 |
| Conread position: | 13-405 |
| Cow position: | chr17:22473405-22473797 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 231, 224 |
| Conread position: | 19-436 |
| Cow position: | chr17:22498982-22498565 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 262 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 64, 40 |
| Conread position: | 25-433 |
| Cow position: | chr17:22553105-22552697 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 259 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 294, 305 |
| Conread position: | 25-436 |
| Cow position: | chr17:22589599-22589188 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 259 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 57, 33 |
| Conread position: | 28-404 |
| Cow position: | chr17:22499393-22499017 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 239 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 81-436 |
| Cow position: | chr17:22452410-22452055 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 145 |
| Conread position: | 111-406 |
| Cow position: | chr17:22499394-22499099 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 192 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 111-429 |
| Cow position: | chr17:22473173-22473485 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 65, 29 |
| Conread position: | 160-436 |
| Cow position: | chr17:22590304-22590028 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 130, 122 |
Show alignments to all cow chromosomes.