Cow genome map


           Conread name:
           raor032_o5.y1
        

               Conread position:
               1-301
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               81, 71
               

               Conread position:
               1-391
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               324, 313
               

               Conread position:
               1-403
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 81
               

               Conread position:
               1-404
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               320, 335
               

               Conread position:
               1-405
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               243, 235
               

               Conread position:
               1-430
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               325, 314
               

               Conread position:
               1-431
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 144
               

               Conread position:
               1-431
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-433
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 57
               

               Conread position:
               1-436
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               330, 314
               

               Conread position:
               1-436
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 57
               

               Conread position:
               2-401
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               247, 235
               

               Conread position:
               2-403
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 37
               

               Conread position:
               2-433
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-436
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               268
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-436
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 52
               

               Conread position:
               7-312
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               206, 0
               

               Conread position:
               7-379
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               237
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               313, 302
               

               Conread position:
               7-380
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               242
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               312, 323
               

               Conread position:
               7-395
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               282, 269
               

               Conread position:
               7-405
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               254
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               298, 291
               

               Conread position:
               7-410
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               7-410
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 51
               

               Conread position:
               7-431
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 51
               

               Conread position:
               7-431
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               7-436
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               228, 220
               

               Conread position:
               7-436
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               7-436
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               270
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               76, 51
               

               Conread position:
               7-436
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               275
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               320, 308
               

               Conread position:
               7-436
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               271
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               298, 291
               

               Conread position:
               7-436
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 291
               

               Conread position:
               10-406
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 10
               

               Conread position:
               11-409
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               319, 304
               

               Conread position:
               11-428
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               268
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               399, 395
               

               Conread position:
               13-405
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               231, 224
               

               Conread position:
               19-436
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               262
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               64, 40
               

               Conread position:
               25-433
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               259
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               294, 305
               

               Conread position:
               25-436
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               259
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               57, 33
               

               Conread position:
               28-404
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               239
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               81-436
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 145
               

               Conread position:
               111-406
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               111-429
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               65, 29
               

               Conread position:
               160-436
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               130, 122
               
Show alignments to all cow chromosomes.