Cow genome map

Conread name: raor032_o5.y1

Conread position: 1-218
Cow position:
Alignm length: 219
Alignm identity: 146
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 64, 57

Conread position: 1-272
Cow position:
Alignm length: 272
Alignm identity: 180
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 1-282
Cow position:
Alignm length: 284
Alignm identity: 184
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 74, 66

Conread position: 1-397
Cow position:
Alignm length: 398
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 57

Conread position: 1-401
Cow position:
Alignm length: 404
Alignm identity: 261
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 72, 57

Conread position: 1-405
Cow position:
Alignm length: 407
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 324, 314

Conread position: 1-409
Cow position:
Alignm length: 409
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-409
Cow position:
Alignm length: 411
Alignm identity: 262
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 334, 307

Conread position: 1-429
Cow position:
Alignm length: 430
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 319, 313

Conread position: 1-431
Cow position:
Alignm length: 432
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 323, 307

Conread position: 1-436
Cow position:
Alignm length: 436
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-436
Cow position:
Alignm length: 436
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-436
Cow position:
Alignm length: 440
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 57

Conread position: 1-436
Cow position:
Alignm length: 437
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 319, 307

Conread position: 2-431
Cow position:
Alignm length: 430
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-404
Cow position:
Alignm length: 403
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 55

Conread position: 3-407
Cow position:
Alignm length: 407
Alignm identity: 257
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 89, 14

Conread position: 3-408
Cow position:
Alignm length: 408
Alignm identity: 257
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 275, 108

Conread position: 3-436
Cow position:
Alignm length: 434
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 260, 0

Conread position: 4-402
Cow position:
Alignm length: 401
Alignm identity: 262
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 79, 66

Conread position: 4-404
Cow position:
Alignm length: 401
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 4-420
Cow position:
Alignm length: 420
Alignm identity: 272
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 154, 143

Conread position: 4-431
Cow position:
Alignm length: 431
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 54

Conread position: 5-289
Cow position:
Alignm length: 285
Alignm identity: 190
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 5-369
Cow position:
Alignm length: 366
Alignm identity: 239
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 63, 53

Conread position: 5-408
Cow position:
Alignm length: 407
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 66

Conread position: 5-419
Cow position:
Alignm length: 416
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 53

Conread position: 5-431
Cow position:
Alignm length: 430
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 53

Conread position: 5-433
Cow position:
Alignm length: 429
Alignm identity: 272
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 5-436
Cow position:
Alignm length: 434
Alignm identity: 277
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 108, 32

Conread position: 6-318
Cow position:
Alignm length: 314
Alignm identity: 207
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 59, 52

Conread position: 6-436
Cow position:
Alignm length: 433
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 280

Conread position: 7-278
Cow position:
Alignm length: 272
Alignm identity: 181
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 7-297
Cow position:
Alignm length: 291
Alignm identity: 191
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 51, 0

Conread position: 7-375
Cow position:
Alignm length: 369
Alignm identity: 235
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 278, 0

Conread position: 7-386
Cow position:
Alignm length: 382
Alignm identity: 252
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 96, 88

Conread position: 7-389
Cow position:
Alignm length: 384
Alignm identity: 243
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 361, 0

Conread position: 7-403
Cow position:
Alignm length: 397
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 7-403
Cow position:
Alignm length: 397
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 7-403
Cow position:
Alignm length: 397
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 7-404
Cow position:
Alignm length: 400
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 52

Conread position: 7-406
Cow position:
Alignm length: 402
Alignm identity: 254
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 228, 236

Conread position: 7-408
Cow position:
Alignm length: 404
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 92

Conread position: 7-409
Cow position:
Alignm length: 406
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 51

Conread position: 7-410
Cow position:
Alignm length: 404
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 7-428
Cow position:
Alignm length: 423
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 301, 323

Conread position: 7-431
Cow position:
Alignm length: 426
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 220

Conread position: 7-431
Cow position:
Alignm length: 426
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 399, 413

Conread position: 7-433
Cow position:
Alignm length: 429
Alignm identity: 273
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 108, 84

Conread position: 7-434
Cow position:
Alignm length: 429
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 146

Conread position: 7-436
Cow position:
Alignm length: 432
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 172

Conread position: 7-436
Cow position:
Alignm length: 431
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 301

Conread position: 7-436
Cow position:
Alignm length: 431
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 51

Conread position: 7-436
Cow position:
Alignm length: 431
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 324, 301

Conread position: 7-436
Cow position:
Alignm length: 431
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 51

Conread position: 7-436
Cow position:
Alignm length: 431
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 230

Conread position: 11-407
Cow position:
Alignm length: 398
Alignm identity: 255
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 314, 101

Conread position: 11-419
Cow position:
Alignm length: 410
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 324

Conread position: 11-422
Cow position:
Alignm length: 413
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 275

Conread position: 11-436
Cow position:
Alignm length: 426
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 12-404
Cow position:
Alignm length: 396
Alignm identity: 255
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 92, 82

Conread position: 12-405
Cow position:
Alignm length: 396
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 141

Conread position: 12-436
Cow position:
Alignm length: 426
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 279

Conread position: 13-401
Cow position:
Alignm length: 389
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 19-404
Cow position:
Alignm length: 387
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 301, 295

Conread position: 25-404
Cow position:
Alignm length: 382
Alignm identity: 250
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 265, 257

Conread position: 28-434
Cow position:
Alignm length: 407
Alignm identity: 255
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 28-436
Cow position:
Alignm length: 410
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 196

Conread position: 29-436
Cow position:
Alignm length: 409
Alignm identity: 252
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 261, 164

Conread position: 52-436
Cow position:
Alignm length: 387
Alignm identity: 256
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 64, 56

Conread position: 81-403
Cow position:
Alignm length: 325
Alignm identity: 218
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 248, 234

Conread position: 90-403
Cow position:
Alignm length: 316
Alignm identity: 208
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 62, 23

Conread position: 92-436
Cow position:
Alignm length: 347
Alignm identity: 222
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 244, 5

Conread position: 94-406
Cow position:
Alignm length: 314
Alignm identity: 204
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 22, 14

Conread position: 107-434
Cow position:
Alignm length: 328
Alignm identity: 219
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 110-411
Cow position:
Alignm length: 305
Alignm identity: 199
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 33, 166

Conread position: 112-408
Cow position:
Alignm length: 297
Alignm identity: 192
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 112-436
Cow position:
Alignm length: 326
Alignm identity: 219
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 214, 203

Conread position: 115-403
Cow position:
Alignm length: 290
Alignm identity: 186
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 205, 9

Show alignments to all cow chromosomes.