Cow genome map
| Conread name: | raor032_o5.y1 |
| Conread position: | 1-193 |
| Cow position: | chr2:82800256-82800448 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-390 |
| Cow position: | chr2:78755978-78756365 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 66, 136 |
| Conread position: | 1-401 |
| Cow position: | chr2:78755393-78755790 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 302, 121 |
| Conread position: | 1-405 |
| Cow position: | chr2:86465408-86465812 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 251 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 66, 58 |
| Conread position: | 1-410 |
| Cow position: | chr2:82799584-82799993 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 261 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-436 |
| Cow position: | chr2:78755142-78755575 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 334, 195 |
| Conread position: | 2-359 |
| Cow position: | chr2:82800089-82800446 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 239 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 301, 296 |
| Conread position: | 5-409 |
| Cow position: | chr2:82799756-82800160 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 255 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-436 |
| Cow position: | chr2:82799840-82800271 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 275 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 386, 395 |
| Conread position: | 6-409 |
| Cow position: | chr2:82799505-82799908 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 237 |
| Conread position: | 6-435 |
| Cow position: | chr2:86465161-86465592 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 271 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 69, 52 |
| Conread position: | 7-431 |
| Cow position: | chr2:78755650-78756073 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 270 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 115, 18 |
| Conread position: | 7-436 |
| Cow position: | chr2:78754896-78755325 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 342, 349 |
| Conread position: | 8-370 |
| Cow position: | chr2:78756070-78756428 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 232 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 95, 44 |
| Conread position: | 11-277 |
| Cow position: | chr2:82800182-82800448 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 44, 52 |
| Conread position: | 11-290 |
| Cow position: | chr2:48689390-48689111 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 11-431 |
| Cow position: | chr2:78754496-78754900 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 265 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 191, 0 |
| Conread position: | 11-436 |
| Cow position: | chr2:78754984-78755408 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 321, 297 |
| Conread position: | 12-434 |
| Cow position: | chr2:78754817-78755239 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 46 |
| Conread position: | 13-429 |
| Cow position: | chr2:82800016-82800432 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 380, 387 |
| Conread position: | 18-405 |
| Cow position: | chr2:86465761-86466148 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 180, 172 |
| Conread position: | 19-436 |
| Cow position: | chr2:78754752-78755157 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 274 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 307, 57 |
| Conread position: | 25-410 |
| Cow position: | chr2:5874680-5874295 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 295, 305 |
| Conread position: | 28-396 |
| Cow position: | chr2:86465267-86465635 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 67, 30 |
| Conread position: | 28-436 |
| Cow position: | chr2:78754263-78754669 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 257 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 220, 178 |
| Conread position: | 29-410 |
| Cow position: | chr2:5875180-5874799 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 237, 213 |
| Conread position: | 31-397 |
| Cow position: | chr2:48689538-48689171 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 231 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 9, 125 |
| Conread position: | 31-436 |
| Cow position: | chr2:78754101-78754501 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 255 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 52, 27 |
| Conread position: | 43-409 |
| Cow position: | chr2:82799458-82799824 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 240 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 265, 287 |
| Conread position: | 103-395 |
| Cow position: | chr2:82799434-82799726 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 205, 214 |
| Conread position: | 111-403 |
| Cow position: | chr2:48689541-48689250 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 127, 0 |
Show alignments to all cow chromosomes.