Cow genome map

Conread name: raor032_o5.y1

Conread position: 1-290
Cow position:
Alignm length: 291
Alignm identity: 184
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 64, 57

Conread position: 1-356
Cow position:
Alignm length: 356
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-357
Cow position:
Alignm length: 359
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 324, 307

Conread position: 1-369
Cow position:
Alignm length: 370
Alignm identity: 243
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 162, 155

Conread position: 1-371
Cow position:
Alignm length: 373
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 58

Conread position: 1-403
Cow position:
Alignm length: 405
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 81

Conread position: 1-407
Cow position:
Alignm length: 409
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 307

Conread position: 1-409
Cow position:
Alignm length: 409
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-409
Cow position:
Alignm length: 410
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 324, 307

Conread position: 1-429
Cow position:
Alignm length: 430
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 324, 314

Conread position: 1-429
Cow position:
Alignm length: 432
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 56

Conread position: 1-430
Cow position:
Alignm length: 431
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 325, 314

Conread position: 1-431
Cow position:
Alignm length: 432
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 324, 314

Conread position: 1-431
Cow position:
Alignm length: 432
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 57

Conread position: 1-431
Cow position:
Alignm length: 431
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-436
Cow position:
Alignm length: 440
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 62

Conread position: 1-436
Cow position:
Alignm length: 437
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 85

Conread position: 1-436
Cow position:
Alignm length: 436
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-436
Cow position:
Alignm length: 436
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-436
Cow position:
Alignm length: 437
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 325, 313

Conread position: 1-436
Cow position:
Alignm length: 438
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 297

Conread position: 1-436
Cow position:
Alignm length: 437
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 324, 307

Conread position: 1-436
Cow position:
Alignm length: 436
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-436
Cow position:
Alignm length: 437
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 324, 313

Conread position: 2-197
Cow position:
Alignm length: 196
Alignm identity: 132
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 2-403
Cow position:
Alignm length: 409
Alignm identity: 255
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 67, 80

Conread position: 2-405
Cow position:
Alignm length: 405
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 308

Conread position: 2-424
Cow position:
Alignm length: 424
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 324, 314

Conread position: 2-431
Cow position:
Alignm length: 430
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-431
Cow position:
Alignm length: 431
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 323, 313

Conread position: 2-436
Cow position:
Alignm length: 436
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 116

Conread position: 3-197
Cow position:
Alignm length: 195
Alignm identity: 131
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-408
Cow position:
Alignm length: 408
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 56

Conread position: 3-408
Cow position:
Alignm length: 408
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 55

Conread position: 3-409
Cow position:
Alignm length: 410
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 55

Conread position: 4-281
Cow position:
Alignm length: 279
Alignm identity: 182
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 172, 159

Conread position: 4-431
Cow position:
Alignm length: 428
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-286
Cow position:
Alignm length: 284
Alignm identity: 186
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 81, 53

Conread position: 5-287
Cow position:
Alignm length: 283
Alignm identity: 185
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 5-288
Cow position:
Alignm length: 286
Alignm identity: 190
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 79, 66

Conread position: 5-289
Cow position:
Alignm length: 285
Alignm identity: 191
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 5-318
Cow position:
Alignm length: 317
Alignm identity: 220
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 87, 54

Conread position: 5-405
Cow position:
Alignm length: 401
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-409
Cow position:
Alignm length: 407
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 226

Conread position: 5-436
Cow position:
Alignm length: 436
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 312

Conread position: 5-436
Cow position:
Alignm length: 432
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-402
Cow position:
Alignm length: 397
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-402
Cow position:
Alignm length: 401
Alignm identity: 247
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 84, 64

Conread position: 6-403
Cow position:
Alignm length: 401
Alignm identity: 262
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 136, 144

Conread position: 6-403
Cow position:
Alignm length: 400
Alignm identity: 255
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 269, 243

Conread position: 6-404
Cow position:
Alignm length: 400
Alignm identity: 248
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 51, 76

Conread position: 6-410
Cow position:
Alignm length: 408
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 53

Conread position: 6-431
Cow position:
Alignm length: 428
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 52

Conread position: 7-205
Cow position:
Alignm length: 201
Alignm identity: 141
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 58, 49

Conread position: 7-237
Cow position:
Alignm length: 232
Alignm identity: 153
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 57, 51

Conread position: 7-285
Cow position:
Alignm length: 279
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 7-285
Cow position:
Alignm length: 279
Alignm identity: 194
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 7-368
Cow position:
Alignm length: 362
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 7-381
Cow position:
Alignm length: 379
Alignm identity: 236
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 60, 51

Conread position: 7-394
Cow position:
Alignm length: 390
Alignm identity: 252
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 228, 240

Conread position: 7-401
Cow position:
Alignm length: 397
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 323, 303

Conread position: 7-401
Cow position:
Alignm length: 395
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 7-403
Cow position:
Alignm length: 401
Alignm identity: 261
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 77, 64

Conread position: 7-405
Cow position:
Alignm length: 403
Alignm identity: 247
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 164, 152

Conread position: 7-405
Cow position:
Alignm length: 401
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 85

Conread position: 7-407
Cow position:
Alignm length: 408
Alignm identity: 272
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 96, 63

Conread position: 7-409
Cow position:
Alignm length: 405
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 140

Conread position: 7-411
Cow position:
Alignm length: 406
Alignm identity: 257
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 175, 171

Conread position: 7-412
Cow position:
Alignm length: 407
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 308

Conread position: 7-431
Cow position:
Alignm length: 427
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 75

Conread position: 7-431
Cow position:
Alignm length: 425
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 7-431
Cow position:
Alignm length: 425
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 7-431
Cow position:
Alignm length: 425
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 7-435
Cow position:
Alignm length: 431
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 64

Conread position: 7-435
Cow position:
Alignm length: 431
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 323, 301

Conread position: 7-436
Cow position:
Alignm length: 434
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 224

Conread position: 7-436
Cow position:
Alignm length: 430
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 7-436
Cow position:
Alignm length: 432
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 75

Conread position: 7-436
Cow position:
Alignm length: 431
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 51

Conread position: 7-436
Cow position:
Alignm length: 431
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 275

Conread position: 7-436
Cow position:
Alignm length: 431
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 399, 391

Conread position: 7-436
Cow position:
Alignm length: 433
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 51

Conread position: 7-436
Cow position:
Alignm length: 431
Alignm identity: 268
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 91, 87

Conread position: 7-437
Cow position:
Alignm length: 433
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 79

Conread position: 7-438
Cow position:
Alignm length: 434
Alignm identity: 277
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 312, 112

Conread position: 8-312
Cow position:
Alignm length: 305
Alignm identity: 195
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 8-431
Cow position:
Alignm length: 441
Alignm identity: 257
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 230, 0

Conread position: 8-436
Cow position:
Alignm length: 429
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 10-436
Cow position:
Alignm length: 428
Alignm identity: 268
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 309, 5

Conread position: 11-434
Cow position:
Alignm length: 425
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 63

Conread position: 12-402
Cow position:
Alignm length: 394
Alignm identity: 239
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 57, 70

Conread position: 13-429
Cow position:
Alignm length: 417
Alignm identity: 264
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 13-431
Cow position:
Alignm length: 419
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 13-431
Cow position:
Alignm length: 419
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 14-404
Cow position:
Alignm length: 394
Alignm identity: 248
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 51, 45

Conread position: 14-431
Cow position:
Alignm length: 421
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 319, 301

Conread position: 16-405
Cow position:
Alignm length: 391
Alignm identity: 246
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 243, 221

Conread position: 16-406
Cow position:
Alignm length: 392
Alignm identity: 249
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 311, 294

Conread position: 16-437
Cow position:
Alignm length: 425
Alignm identity: 271
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 166, 162

Conread position: 21-404
Cow position:
Alignm length: 388
Alignm identity: 235
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 48, 61

Conread position: 31-403
Cow position:
Alignm length: 375
Alignm identity: 244
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 274, 267

Conread position: 33-392
Cow position:
Alignm length: 361
Alignm identity: 237
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 292, 275

Conread position: 36-397
Cow position:
Alignm length: 365
Alignm identity: 234
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 34, 48

Conread position: 37-401
Cow position:
Alignm length: 366
Alignm identity: 237
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 35, 55

Conread position: 81-407
Cow position:
Alignm length: 327
Alignm identity: 206
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 88-397
Cow position:
Alignm length: 312
Alignm identity: 199
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 26, 18

Conread position: 90-428
Cow position:
Alignm length: 344
Alignm identity: 227
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 157, 134

Conread position: 90-436
Cow position:
Alignm length: 348
Alignm identity: 228
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 229, 208

Conread position: 106-436
Cow position:
Alignm length: 331
Alignm identity: 216
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 87, 0

Conread position: 108-433
Cow position:
Alignm length: 328
Alignm identity: 222
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 14, 208

Conread position: 114-408
Cow position:
Alignm length: 296
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 184

Conread position: 114-436
Cow position:
Alignm length: 324
Alignm identity: 217
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 208, 200

Conread position: 117-431
Cow position:
Alignm length: 316
Alignm identity: 194
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 208, 198

Conread position: 121-397
Cow position:
Alignm length: 279
Alignm identity: 190
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 122, 131

Conread position: 121-409
Cow position:
Alignm length: 289
Alignm identity: 188
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.