Cow genome map
| Conread name: | raor032_o5.y1 |
| Conread position: | 1-208 |
| Cow position: | chr24:17070852-17071059 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-410 |
| Cow position: | chr24:17035733-17035324 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 325, 314 |
| Conread position: | 1-431 |
| Cow position: | chr24:17035649-17035219 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 304, 297 |
| Conread position: | 1-431 |
| Cow position: | chr24:17035901-17035471 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 71 |
| Conread position: | 1-432 |
| Cow position: | chr24:17036237-17035806 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 410, 406 |
| Conread position: | 1-433 |
| Cow position: | chr24:17036405-17035973 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 325, 314 |
| Conread position: | 1-436 |
| Cow position: | chr24:17035817-17035382 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 71 |
| Conread position: | 1-436 |
| Cow position: | chr24:17035985-17035550 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 57 |
| Conread position: | 1-436 |
| Cow position: | chr24:17036570-17036138 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 309, 22 |
| Conread position: | 5-274 |
| Cow position: | chr24:17035309-17035040 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 62, 53 |
| Conread position: | 5-274 |
| Cow position: | chr24:17070772-17071041 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 60, 53 |
| Conread position: | 6-370 |
| Cow position: | chr24:17070689-17071053 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 52 |
| Conread position: | 6-431 |
| Cow position: | chr24:17036484-17036059 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 319, 303 |
| Conread position: | 7-295 |
| Cow position: | chr24:17077778-17077491 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 271, 0 |
| Conread position: | 7-297 |
| Cow position: | chr24:17013227-17013516 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 201 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 58, 51 |
| Conread position: | 7-297 |
| Cow position: | chr24:17035223-17034934 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 183 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 281, 0 |
| Conread position: | 7-371 |
| Cow position: | chr24:17035391-17035027 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-403 |
| Cow position: | chr24:17078030-17077634 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-407 |
| Cow position: | chr24:17077946-17077546 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-410 |
| Cow position: | chr24:17070522-17070925 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-436 |
| Cow position: | chr24:17035559-17035130 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 318, 301 |
| Conread position: | 7-436 |
| Cow position: | chr24:17036063-17035634 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-436 |
| Cow position: | chr24:17036147-17035718 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 307 |
| Conread position: | 7-436 |
| Cow position: | chr24:17036315-17035886 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 301, 310 |
| Conread position: | 7-436 |
| Cow position: | chr24:17078114-17077685 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 51 |
| Conread position: | 10-401 |
| Cow position: | chr24:17013146-17013536 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 309, 304 |
| Conread position: | 11-408 |
| Cow position: | chr24:17077858-17077462 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 245 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 360, 0 |
| Conread position: | 11-431 |
| Cow position: | chr24:17078278-17077858 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 47 |
| Conread position: | 12-431 |
| Cow position: | chr24:17070443-17070862 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 407, 395 |
| Conread position: | 40-409 |
| Cow position: | chr24:17070387-17070756 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 242 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 41-235 |
| Cow position: | chr24:16986443-16986637 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 108, 99 |
| Conread position: | 82-409 |
| Cow position: | chr24:17078123-17077796 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 90-436 |
| Cow position: | chr24:17078283-17077937 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 196 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 95-431 |
| Cow position: | chr24:17013147-17013483 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 227 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 163, 135 |
| Conread position: | 113-319 |
| Cow position: | chr24:16986431-16986637 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 123, 111 |
Show alignments to all cow chromosomes.