Cow genome map
Conread name: | raor032_o5.y1 |
Conread position: | 1-200 |
Cow position: | chr28:9253412-9253611 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 140 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-233 |
Cow position: | chr28:33210369-33210602 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 162 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 193, 0 |
Conread position: | 1-436 |
Cow position: | chr28:7810405-7810831 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 245, 120 |
Conread position: | 1-436 |
Cow position: | chr28:11333660-11333225 (view UCSC Genome Browser custom track) |
Alignm length: | 445 |
Alignm identity: | 269 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 143, 148 |
Conread position: | 2-221 |
Cow position: | chr28:9290476-9290695 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 148 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 2-380 |
Cow position: | chr28:11333911-11333533 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 245, 230 |
Conread position: | 2-436 |
Cow position: | chr28:9252908-9253343 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 281 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 37, 58 |
Conread position: | 2-436 |
Cow position: | chr28:9299279-9299710 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 277 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 272, 298 |
Conread position: | 3-420 |
Cow position: | chr28:9290229-9290642 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 4-411 |
Cow position: | chr28:34679500-34679101 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 268 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 165, 106 |
Conread position: | 4-428 |
Cow position: | chr28:9253247-9253672 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 370, 417 |
Conread position: | 5-431 |
Cow position: | chr28:9253080-9253506 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 321, 309 |
Conread position: | 5-436 |
Cow position: | chr28:7757393-7757824 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 53 |
Conread position: | 6-312 |
Cow position: | chr28:7757982-7758288 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 202 |
Alignm E-value: | 6e-35 |
Alignm gaps (pig, cow): | 169, 157 |
Conread position: | 7-274 |
Cow position: | chr28:7758067-7758334 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 177 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 7-375 |
Cow position: | chr28:34673418-34673786 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 241 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 318, 308 |
Conread position: | 7-383 |
Cow position: | chr28:7810570-7810946 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 252 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 75, 51 |
Conread position: | 7-396 |
Cow position: | chr28:9298797-9299183 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 317, 17 |
Conread position: | 7-402 |
Cow position: | chr28:7757815-7758210 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 254 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 7-408 |
Cow position: | chr28:9290315-9290714 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 255 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 318, 74 |
Conread position: | 7-410 |
Cow position: | chr28:7757731-7758134 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 228, 232 |
Conread position: | 7-410 |
Cow position: | chr28:7757899-7758302 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 51 |
Conread position: | 7-411 |
Cow position: | chr28:7758387-7758790 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 220, 242 |
Conread position: | 7-419 |
Cow position: | chr28:7810327-7810730 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 323, 210 |
Conread position: | 7-420 |
Cow position: | chr28:34695891-34696304 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 258 |
Alignm E-value: | 6e-35 |
Alignm gaps (pig, cow): | 90, 95 |
Conread position: | 7-431 |
Cow position: | chr28:34673502-34673926 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 271 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 176, 171 |
Conread position: | 7-436 |
Cow position: | chr28:7757479-7757908 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 319, 307 |
Conread position: | 8-397 |
Cow position: | chr28:11334073-11333683 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 251 |
Alignm E-value: | 5.00264e-43 |
Alignm gaps (pig, cow): | 385, 0 |
Conread position: | 11-318 |
Cow position: | chr28:33210295-33210602 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 198 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 267, 297 |
Conread position: | 11-402 |
Cow position: | chr28:11333734-11333349 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 247 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 291, 267 |
Conread position: | 11-409 |
Cow position: | chr28:34696147-34696545 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 250 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 11-436 |
Cow position: | chr28:7757651-7758076 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 47 |
Conread position: | 11-436 |
Cow position: | chr28:11334154-11333729 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 269 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 309, 297 |
Conread position: | 11-438 |
Cow position: | chr28:9289984-9290409 (view UCSC Genome Browser custom track) |
Alignm length: | 436 |
Alignm identity: | 284 |
Alignm E-value: | 9e-39 |
Alignm gaps (pig, cow): | 71, 102 |
Conread position: | 17-409 |
Cow position: | chr28:34695985-34696377 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 239 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 24-426 |
Cow position: | chr28:9299217-9299616 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 252 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 61, 38 |
Conread position: | 25-405 |
Cow position: | chr28:9298564-9298942 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 253 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 39, 103 |
Conread position: | 25-436 |
Cow position: | chr28:9253016-9253427 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 295, 289 |
Conread position: | 27-409 |
Cow position: | chr28:33210227-33210610 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 248 |
Alignm E-value: | 9e-39 |
Alignm gaps (pig, cow): | 199, 206 |
Conread position: | 28-431 |
Cow position: | chr28:7758324-7758727 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 230 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 280, 296 |
Conread position: | 30-436 |
Cow position: | chr28:7757334-7757740 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 255 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 37, 28 |
Conread position: | 35-429 |
Cow position: | chr28:34673362-34673756 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 273, 281 |
Conread position: | 47-436 |
Cow position: | chr28:7810283-7810663 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 250 |
Alignm E-value: | 7e-36 |
Alignm gaps (pig, cow): | 367, 254 |
Conread position: | 112-436 |
Cow position: | chr28:33210228-33210552 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 206 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 123-401 |
Cow position: | chr28:34679549-34679268 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 186 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 197, 159 |
Conread position: | 124-381 |
Cow position: | chr28:7810276-7810533 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 173 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 111, 115 |
Conread position: | 124-409 |
Cow position: | chr28:34695840-34696125 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 186 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.