Cow genome map

Conread name: raor032_o5.y1

Conread position: 1-200
Cow position: chr28:9253412-9253611 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 140
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-233
Cow position: chr28:33210369-33210602 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 193, 0

Conread position: 1-436
Cow position: chr28:7810405-7810831 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 120

Conread position: 1-436
Cow position: chr28:11333660-11333225 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 269
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 143, 148

Conread position: 2-221
Cow position: chr28:9290476-9290695 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 148
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 2-380
Cow position: chr28:11333911-11333533 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 230

Conread position: 2-436
Cow position: chr28:9252908-9253343 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 281
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 37, 58

Conread position: 2-436
Cow position: chr28:9299279-9299710 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 277
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 272, 298

Conread position: 3-420
Cow position: chr28:9290229-9290642 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 4-411
Cow position: chr28:34679500-34679101 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 268
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 165, 106

Conread position: 4-428
Cow position: chr28:9253247-9253672 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 370, 417

Conread position: 5-431
Cow position: chr28:9253080-9253506 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 309

Conread position: 5-436
Cow position: chr28:7757393-7757824 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 53

Conread position: 6-312
Cow position: chr28:7757982-7758288 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 202
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 169, 157

Conread position: 7-274
Cow position: chr28:7758067-7758334 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 177
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 7-375
Cow position: chr28:34673418-34673786 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 241
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 318, 308

Conread position: 7-383
Cow position: chr28:7810570-7810946 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 252
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 75, 51

Conread position: 7-396
Cow position: chr28:9298797-9299183 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 17

Conread position: 7-402
Cow position: chr28:7757815-7758210 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 254
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 7-408
Cow position: chr28:9290315-9290714 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 255
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 318, 74

Conread position: 7-410
Cow position: chr28:7757731-7758134 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 232

Conread position: 7-410
Cow position: chr28:7757899-7758302 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 51

Conread position: 7-411
Cow position: chr28:7758387-7758790 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 242

Conread position: 7-419
Cow position: chr28:7810327-7810730 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 323, 210

Conread position: 7-420
Cow position: chr28:34695891-34696304 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 258
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 90, 95

Conread position: 7-431
Cow position: chr28:34673502-34673926 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 271
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 176, 171

Conread position: 7-436
Cow position: chr28:7757479-7757908 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 319, 307

Conread position: 8-397
Cow position: chr28:11334073-11333683 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 251
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 385, 0

Conread position: 11-318
Cow position: chr28:33210295-33210602 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 198
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 267, 297

Conread position: 11-402
Cow position: chr28:11333734-11333349 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 247
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 291, 267

Conread position: 11-409
Cow position: chr28:34696147-34696545 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 250
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 11-436
Cow position: chr28:7757651-7758076 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 47

Conread position: 11-436
Cow position: chr28:11334154-11333729 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 269
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 309, 297

Conread position: 11-438
Cow position: chr28:9289984-9290409 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 284
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 71, 102

Conread position: 17-409
Cow position: chr28:34695985-34696377 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 239
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 24-426
Cow position: chr28:9299217-9299616 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 252
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 61, 38

Conread position: 25-405
Cow position: chr28:9298564-9298942 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 253
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 39, 103

Conread position: 25-436
Cow position: chr28:9253016-9253427 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 289

Conread position: 27-409
Cow position: chr28:33210227-33210610 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 248
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 199, 206

Conread position: 28-431
Cow position: chr28:7758324-7758727 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 230
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 280, 296

Conread position: 30-436
Cow position: chr28:7757334-7757740 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 255
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 37, 28

Conread position: 35-429
Cow position: chr28:34673362-34673756 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 281

Conread position: 47-436
Cow position: chr28:7810283-7810663 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 250
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 367, 254

Conread position: 112-436
Cow position: chr28:33210228-33210552 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 206
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 123-401
Cow position: chr28:34679549-34679268 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 186
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 197, 159

Conread position: 124-381
Cow position: chr28:7810276-7810533 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 173
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 111, 115

Conread position: 124-409
Cow position: chr28:34695840-34696125 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 186
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.