Cow genome map
| Conread name: | raor032_o5.y1 |
| Conread position: | 1-436 |
| Cow position: | chr6:49340797-49341232 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 319, 307 |
| Conread position: | 2-297 |
| Cow position: | chr6:49341134-49341429 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 207 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 152, 165 |
| Conread position: | 2-431 |
| Cow position: | chr6:49340966-49341395 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-436 |
| Cow position: | chr6:49340462-49340896 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 231, 222 |
| Conread position: | 2-436 |
| Cow position: | chr6:49340630-49341064 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 231, 222 |
| Conread position: | 2-436 |
| Cow position: | chr6:49340882-49341316 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 318, 312 |
| Conread position: | 4-409 |
| Cow position: | chr6:49396269-49396674 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 173 |
| Conread position: | 6-395 |
| Cow position: | chr6:49341054-49341443 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-408 |
| Cow position: | chr6:49428626-49429028 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 242 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 164, 171 |
| Conread position: | 7-395 |
| Cow position: | chr6:49396608-49396996 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 55, 48 |
| Conread position: | 7-415 |
| Cow position: | chr6:49396440-49396849 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 263 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 73, 82 |
| Conread position: | 7-431 |
| Cow position: | chr6:49396194-49396612 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 275 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 57, 37 |
| Conread position: | 7-436 |
| Cow position: | chr6:49340551-49340980 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 318, 301 |
| Conread position: | 7-436 |
| Cow position: | chr6:49340719-49341148 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 313, 307 |
| Conread position: | 11-433 |
| Cow position: | chr6:49396528-49396950 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 12-436 |
| Cow position: | chr6:49340388-49340812 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 296 |
| Conread position: | 13-409 |
| Cow position: | chr6:49396032-49396422 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 261 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 51, 44 |
| Conread position: | 16-436 |
| Cow position: | chr6:49395783-49396203 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 246 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 312, 292 |
| Conread position: | 17-409 |
| Cow position: | chr6:49428469-49428861 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 321, 308 |
| Conread position: | 17-430 |
| Cow position: | chr6:49362328-49362729 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 219, 210 |
| Conread position: | 19-380 |
| Cow position: | chr6:49428723-49429084 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 215 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 51, 62 |
| Conread position: | 19-408 |
| Cow position: | chr6:49428975-49429364 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 234 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 90-392 |
| Cow position: | chr6:49362641-49362947 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 212, 0 |
| Conread position: | 127-409 |
| Cow position: | chr6:49428243-49428525 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.