Cow genome map

Conread name: raor032_o5.y1

Conread position: 1-275
Cow position:
Alignm length: 277
Alignm identity: 186
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 82, 57

Conread position: 1-378
Cow position:
Alignm length: 378
Alignm identity: 244
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 1-405
Cow position:
Alignm length: 405
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-410
Cow position:
Alignm length: 412
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 330, 314

Conread position: 1-436
Cow position:
Alignm length: 436
Alignm identity: 267
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 207, 0

Conread position: 1-436
Cow position:
Alignm length: 439
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 239

Conread position: 1-436
Cow position:
Alignm length: 438
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 298

Conread position: 3-358
Cow position:
Alignm length: 357
Alignm identity: 231
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 317, 311

Conread position: 3-409
Cow position:
Alignm length: 407
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-409
Cow position:
Alignm length: 406
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 219

Conread position: 5-436
Cow position:
Alignm length: 432
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-294
Cow position:
Alignm length: 289
Alignm identity: 190
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 6-397
Cow position:
Alignm length: 393
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 302

Conread position: 6-409
Cow position:
Alignm length: 406
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 338, 302

Conread position: 7-234
Cow position:
Alignm length: 230
Alignm identity: 157
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 65, 51

Conread position: 7-272
Cow position:
Alignm length: 269
Alignm identity: 183
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 84, 64

Conread position: 7-318
Cow position:
Alignm length: 316
Alignm identity: 220
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 62, 82

Conread position: 7-376
Cow position:
Alignm length: 373
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 219

Conread position: 7-397
Cow position:
Alignm length: 395
Alignm identity: 258
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 63, 84

Conread position: 7-401
Cow position:
Alignm length: 397
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 56

Conread position: 7-401
Cow position:
Alignm length: 396
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 51

Conread position: 7-401
Cow position:
Alignm length: 400
Alignm identity: 248
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 86, 55

Conread position: 7-402
Cow position:
Alignm length: 397
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 308

Conread position: 7-402
Cow position:
Alignm length: 402
Alignm identity: 263
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 83, 64

Conread position: 7-402
Cow position:
Alignm length: 400
Alignm identity: 255
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 85, 64

Conread position: 7-403
Cow position:
Alignm length: 400
Alignm identity: 252
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 62, 84

Conread position: 7-403
Cow position:
Alignm length: 398
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 85

Conread position: 7-403
Cow position:
Alignm length: 398
Alignm identity: 257
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 62, 84

Conread position: 7-404
Cow position:
Alignm length: 400
Alignm identity: 258
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 110, 87

Conread position: 7-404
Cow position:
Alignm length: 402
Alignm identity: 262
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 161, 146

Conread position: 7-405
Cow position:
Alignm length: 402
Alignm identity: 248
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 151, 146

Conread position: 7-405
Cow position:
Alignm length: 401
Alignm identity: 248
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 64, 84

Conread position: 7-405
Cow position:
Alignm length: 403
Alignm identity: 260
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 58, 51

Conread position: 7-405
Cow position:
Alignm length: 400
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 307

Conread position: 7-406
Cow position:
Alignm length: 402
Alignm identity: 260
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 58, 51

Conread position: 7-407
Cow position:
Alignm length: 402
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 51

Conread position: 7-409
Cow position:
Alignm length: 404
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 66

Conread position: 7-409
Cow position:
Alignm length: 404
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 51

Conread position: 7-410
Cow position:
Alignm length: 405
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 308

Conread position: 7-426
Cow position:
Alignm length: 422
Alignm identity: 272
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 301, 74

Conread position: 7-433
Cow position:
Alignm length: 428
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 67

Conread position: 7-436
Cow position:
Alignm length: 433
Alignm identity: 268
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 116, 129

Conread position: 7-436
Cow position:
Alignm length: 443
Alignm identity: 288
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 58, 51

Conread position: 7-436
Cow position:
Alignm length: 430
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 8-407
Cow position:
Alignm length: 403
Alignm identity: 265
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 82, 62

Conread position: 11-401
Cow position:
Alignm length: 396
Alignm identity: 251
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 239, 134

Conread position: 11-402
Cow position:
Alignm length: 393
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 164

Conread position: 11-404
Cow position:
Alignm length: 395
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 166

Conread position: 11-404
Cow position:
Alignm length: 394
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 11-405
Cow position:
Alignm length: 399
Alignm identity: 260
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 60, 80

Conread position: 11-436
Cow position:
Alignm length: 429
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 63

Conread position: 12-436
Cow position:
Alignm length: 430
Alignm identity: 273
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 72, 59

Conread position: 13-403
Cow position:
Alignm length: 393
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 324

Conread position: 15-436
Cow position:
Alignm length: 424
Alignm identity: 261
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 69, 55

Conread position: 15-436
Cow position:
Alignm length: 423
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 299

Conread position: 15-436
Cow position:
Alignm length: 425
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 53

Conread position: 19-234
Cow position:
Alignm length: 216
Alignm identity: 145
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 211, 0

Conread position: 19-397
Cow position:
Alignm length: 380
Alignm identity: 242
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 72, 52

Conread position: 19-401
Cow position:
Alignm length: 385
Alignm identity: 236
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 46, 31

Conread position: 19-403
Cow position:
Alignm length: 387
Alignm identity: 250
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 49, 73

Conread position: 19-407
Cow position:
Alignm length: 395
Alignm identity: 249
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 51, 72

Conread position: 19-436
Cow position:
Alignm length: 419
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 296

Conread position: 21-405
Cow position:
Alignm length: 386
Alignm identity: 251
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 63, 70

Conread position: 24-433
Cow position:
Alignm length: 414
Alignm identity: 251
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 69, 43

Conread position: 25-312
Cow position:
Alignm length: 289
Alignm identity: 186
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 283, 0

Conread position: 28-383
Cow position:
Alignm length: 356
Alignm identity: 221
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 28-431
Cow position:
Alignm length: 404
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 29-403
Cow position:
Alignm length: 378
Alignm identity: 231
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 88, 105

Conread position: 30-405
Cow position:
Alignm length: 380
Alignm identity: 251
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 55, 41

Conread position: 41-436
Cow position:
Alignm length: 396
Alignm identity: 255
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 87-405
Cow position:
Alignm length: 319
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 90-445
Cow position:
Alignm length: 362
Alignm identity: 239
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 20, 33

Conread position: 112-436
Cow position:
Alignm length: 326
Alignm identity: 208
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 300, 291

Conread position: 171-436
Cow position:
Alignm length: 272
Alignm identity: 178
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 154, 143

Conread position: 174-436
Cow position:
Alignm length: 267
Alignm identity: 173
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 40, 36

Show alignments to all cow chromosomes.