Cow genome map
| Conread name: | raor032_o5.y1 |
| Conread position: | 1-296 |
| Cow position: | chr8:55581383-55581678 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 192 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-322 |
| Cow position: | chr8:46817026-46817347 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-357 |
| Cow position: | chr8:48406565-48406200 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 273, 0 |
| Conread position: | 1-402 |
| Cow position: | chr8:55581047-55581448 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-410 |
| Cow position: | chr8:45200991-45201400 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 57 |
| Conread position: | 1-410 |
| Cow position: | chr8:48406817-48406408 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 97 |
| Conread position: | 1-410 |
| Cow position: | chr8:48407237-48406829 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 289, 281 |
| Conread position: | 1-431 |
| Cow position: | chr8:55581131-55581561 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 323, 307 |
| Conread position: | 1-436 |
| Cow position: | chr8:46816438-46816873 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 319, 313 |
| Conread position: | 1-436 |
| Cow position: | chr8:48406985-48406550 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 241 |
| Conread position: | 1-436 |
| Cow position: | chr8:48407489-48407054 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 307, 315 |
| Conread position: | 1-436 |
| Cow position: | chr8:48407573-48407138 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 391, 399 |
| Conread position: | 2-431 |
| Cow position: | chr8:48407152-48406723 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 56 |
| Conread position: | 2-436 |
| Cow position: | chr8:48407320-48406886 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 56 |
| Conread position: | 3-407 |
| Cow position: | chr8:45200909-45201313 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 21 |
| Conread position: | 3-436 |
| Cow position: | chr8:46816272-46816705 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 286, 279 |
| Conread position: | 5-410 |
| Cow position: | chr8:55580883-55581288 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 309 |
| Conread position: | 6-403 |
| Cow position: | chr8:46816107-46816504 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-436 |
| Cow position: | chr8:45200828-45201258 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 266 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 79, 56 |
| Conread position: | 6-436 |
| Cow position: | chr8:46816611-46817041 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 52 |
| Conread position: | 7-282 |
| Cow position: | chr8:46817116-46817391 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 58, 51 |
| Conread position: | 7-403 |
| Cow position: | chr8:55581305-55581701 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 256 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 77, 51 |
| Conread position: | 7-410 |
| Cow position: | chr8:45201333-45201736 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 51 |
| Conread position: | 7-410 |
| Cow position: | chr8:46816696-46817099 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 82 |
| Conread position: | 7-414 |
| Cow position: | chr8:45201585-45201993 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 323, 307 |
| Conread position: | 7-431 |
| Cow position: | chr8:46816528-46816952 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 51 |
| Conread position: | 7-431 |
| Cow position: | chr8:46816780-46817204 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 51 |
| Conread position: | 7-431 |
| Cow position: | chr8:48406895-48406471 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 265 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 134, 156 |
| Conread position: | 7-431 |
| Cow position: | chr8:48407399-48406975 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-435 |
| Cow position: | chr8:45201501-45201929 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-436 |
| Cow position: | chr8:45201081-45201510 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 49 |
| Conread position: | 7-436 |
| Cow position: | chr8:45201249-45201678 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 314, 323 |
| Conread position: | 7-436 |
| Cow position: | chr8:46816192-46816621 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 313, 307 |
| Conread position: | 7-436 |
| Cow position: | chr8:55581221-55581650 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 318, 307 |
| Conread position: | 11-436 |
| Cow position: | chr8:46815941-46816369 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 275 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 24, 102 |
| Conread position: | 11-436 |
| Cow position: | chr8:46816364-46816789 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 47 |
| Conread position: | 11-436 |
| Cow position: | chr8:46816868-46817293 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 391, 401 |
| Conread position: | 14-401 |
| Cow position: | chr8:55580976-55581362 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 321, 301 |
| Conread position: | 15-436 |
| Cow position: | chr8:48407055-48406634 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 287, 309 |
| Conread position: | 19-435 |
| Cow position: | chr8:46816960-46817376 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 147 |
| Conread position: | 19-436 |
| Cow position: | chr8:46816036-46816453 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 279, 285 |
| Conread position: | 28-436 |
| Cow position: | chr8:48406706-48406298 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 28-436 |
| Cow position: | chr8:48407630-48407222 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 292, 281 |
| Conread position: | 49-395 |
| Cow position: | chr8:6958059-6957714 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 250, 0 |
| Conread position: | 78-405 |
| Cow position: | chr8:45200816-45201143 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 120, 112 |
| Conread position: | 123-431 |
| Cow position: | chr8:55580833-55581141 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 197, 191 |
Show alignments to all cow chromosomes.