Cow genome map
| Conread name: | raor032_o5.y1 |
| Conread position: | 1-295 |
| Cow position: | chrX:29044951-29044657 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-382 |
| Cow position: | chrX:29045035-29044654 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 251 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 66, 57 |
| Conread position: | 1-419 |
| Cow position: | chrX:25309863-25310281 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-436 |
| Cow position: | chrX:25309779-25310214 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 145 |
| Conread position: | 1-436 |
| Cow position: | chrX:25324690-25324255 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 288, 281 |
| Conread position: | 1-436 |
| Cow position: | chrX:25324942-25324507 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-436 |
| Cow position: | chrX:29045287-29044852 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-403 |
| Cow position: | chrX:25325697-25325296 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 56 |
| Conread position: | 2-429 |
| Cow position: | chrX:25309696-25310123 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 56 |
| Conread position: | 3-436 |
| Cow position: | chrX:25325108-25324675 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 277 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 286, 282 |
| Conread position: | 4-402 |
| Cow position: | chrX:13826804-13826406 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 243 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 301, 294 |
| Conread position: | 6-403 |
| Cow position: | chrX:25325273-25324876 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 324 |
| Conread position: | 6-431 |
| Cow position: | chrX:25324601-25324180 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 275 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 61, 53 |
| Conread position: | 7-380 |
| Cow position: | chrX:25310205-25310578 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 337, 309 |
| Conread position: | 7-401 |
| Cow position: | chrX:12627668-12628062 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 253 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 84, 74 |
| Conread position: | 7-403 |
| Cow position: | chrX:25324852-25324456 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 8 |
| Conread position: | 7-431 |
| Cow position: | chrX:25309953-25310377 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 156 |
| Conread position: | 7-436 |
| Cow position: | chrX:25310037-25310466 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 144 |
| Conread position: | 7-436 |
| Cow position: | chrX:25310121-25310550 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 167 |
| Conread position: | 7-436 |
| Cow position: | chrX:25324768-25324339 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 51 |
| Conread position: | 7-436 |
| Cow position: | chrX:25325020-25324591 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 51 |
| Conread position: | 7-436 |
| Cow position: | chrX:25325188-25324759 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 85 |
| Conread position: | 7-436 |
| Cow position: | chrX:25325356-25324927 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 65 |
| Conread position: | 7-436 |
| Cow position: | chrX:25325440-25325011 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 323, 307 |
| Conread position: | 7-436 |
| Cow position: | chrX:25325524-25325095 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 323, 301 |
| Conread position: | 7-436 |
| Cow position: | chrX:25325776-25325347 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 51 |
| Conread position: | 7-436 |
| Cow position: | chrX:29045113-29044684 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 51 |
| Conread position: | 7-436 |
| Cow position: | chrX:29045197-29044768 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 51 |
| Conread position: | 8-252 |
| Cow position: | chrX:12627837-12628080 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 96, 86 |
| Conread position: | 8-436 |
| Cow position: | chrX:29045361-29044936 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 279 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 241, 29 |
| Conread position: | 13-313 |
| Cow position: | chrX:29045758-29045458 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 206 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 16-403 |
| Cow position: | chrX:13826876-13826489 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 43, 55 |
| Conread position: | 24-436 |
| Cow position: | chrX:29045831-29045419 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 270 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 59, 46 |
| Conread position: | 28-410 |
| Cow position: | chrX:25325587-25325205 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 30 |
| Conread position: | 72-436 |
| Cow position: | chrX:25309682-25310046 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 245 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 45, 52 |
| Conread position: | 191-436 |
| Cow position: | chrX:29045832-29045587 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 45, 56 |
Show alignments to all cow chromosomes.