Cow genome map
| Conread name: | raor034_k9.y1 |
| Conread position: | 4-213 |
| Cow position: | chr17:22590215-22590006 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 74, 80 |
| Conread position: | 4-219 |
| Cow position: | chr17:22551957-22551742 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-219 |
| Cow position: | chr17:22552293-22552078 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-219 |
| Cow position: | chr17:22552545-22552330 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-219 |
| Cow position: | chr17:22552629-22552414 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-219 |
| Cow position: | chr17:22589459-22589244 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 69, 81 |
| Conread position: | 5-210 |
| Cow position: | chr17:22473726-22473932 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 161, 172 |
| Conread position: | 5-213 |
| Cow position: | chr17:22551872-22551664 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-219 |
| Cow position: | chr17:22452325-22452111 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-219 |
| Cow position: | chr17:22473474-22473688 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 75, 69 |
| Conread position: | 5-219 |
| Cow position: | chr17:22499171-22498957 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 165, 171 |
| Conread position: | 5-219 |
| Cow position: | chr17:22551788-22551574 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 164, 173 |
| Conread position: | 5-219 |
| Cow position: | chr17:22552712-22552498 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 71, 79 |
| Conread position: | 5-220 |
| Cow position: | chr17:22452073-22451858 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-220 |
| Cow position: | chr17:22553048-22552833 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-221 |
| Cow position: | chr17:22473306-22473522 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 170, 159 |
| Conread position: | 5-221 |
| Cow position: | chr17:22473558-22473774 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 156, 172 |
| Conread position: | 5-221 |
| Cow position: | chr17:22498835-22498619 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 79, 65 |
| Conread position: | 5-221 |
| Cow position: | chr17:22589710-22589494 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 71, 81 |
| Conread position: | 6-213 |
| Cow position: | chr17:22590297-22590090 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 187, 182 |
| Conread position: | 6-219 |
| Cow position: | chr17:22552963-22552750 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-221 |
| Cow position: | chr17:22553129-22552916 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 9-215 |
| Cow position: | chr17:22552373-22552166 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 5, 87 |
| Conread position: | 9-219 |
| Cow position: | chr17:22589538-22589328 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 148, 171 |
| Conread position: | 9-219 |
| Cow position: | chr17:22589790-22589580 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-218 |
| Cow position: | chr17:22498743-22498538 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-219 |
| Cow position: | chr17:22551696-22551490 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-219 |
| Cow position: | chr17:22552032-22551826 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 156, 164 |
| Conread position: | 13-219 |
| Cow position: | chr17:22552116-22551910 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-220 |
| Cow position: | chr17:22473398-22473605 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 155, 145 |
| Conread position: | 13-221 |
| Cow position: | chr17:22451981-22451773 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 193, 200 |
| Conread position: | 13-221 |
| Cow position: | chr17:22498911-22498703 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 175, 147 |
| Conread position: | 13-221 |
| Cow position: | chr17:22552788-22552580 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 155, 164 |
| Conread position: | 14-219 |
| Cow position: | chr17:22552871-22552666 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 14-221 |
| Cow position: | chr17:22499414-22499207 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 15, 8 |
| Conread position: | 19-219 |
| Cow position: | chr17:22552194-22551994 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 19-221 |
| Cow position: | chr17:22473656-22473858 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 25-220 |
| Cow position: | chr17:22452389-22452194 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 26-220 |
| Cow position: | chr17:22498982-22498788 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 59, 48 |
Show alignments to all cow chromosomes.