Cow genome map

Conread name: raor034_k9.y1

Conread position: 3-221
Cow position: chr22:12385447-12385227 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 154
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 39, 0

Conread position: 3-221
Cow position: chr22:12385699-12385481 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 149
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 33, 24

Conread position: 4-219
Cow position: chr22:12499008-12499223 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 154
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 69, 74

Conread position: 5-197
Cow position: chr22:12418888-12418696 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 130
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-204
Cow position: chr22:12385107-12384908 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 139
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 161, 172

Conread position: 5-207
Cow position: chr22:12475494-12475292 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 5-207
Cow position: chr22:12499765-12499967 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 140
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 5-208
Cow position: chr22:12457965-12457762 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 136
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 161, 172

Conread position: 5-219
Cow position: chr22:11641081-11641295 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 141
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 94, 82

Conread position: 5-219
Cow position: chr22:12399705-12399491 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 158
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 80, 70

Conread position: 5-219
Cow position: chr22:12418972-12418758 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 152
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 5-219
Cow position: chr22:12458049-12457835 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 146
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 73, 86

Conread position: 5-219
Cow position: chr22:12458301-12458087 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 141
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-219
Cow position: chr22:12475662-12475448 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 5-219
Cow position: chr22:12475830-12475616 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 147
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 5-219
Cow position: chr22:12499429-12499643 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 145
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 5-220
Cow position: chr22:12385529-12385312 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 151
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 75, 69

Conread position: 5-220
Cow position: chr22:12399201-12398986 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 5-220
Cow position: chr22:12431013-12430798 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 64, 77

Conread position: 5-220
Cow position: chr22:12431181-12430966 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 148
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 5-220
Cow position: chr22:12431685-12431470 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 146
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 75, 86

Conread position: 5-220
Cow position: chr22:12476166-12475951 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 146
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 5-220
Cow position: chr22:12499093-12499308 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 145
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 5-220
Cow position: chr22:46654068-46654283 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 144
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 163, 156

Conread position: 5-221
Cow position: chr22:11640913-11641129 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 149
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 156, 167

Conread position: 5-221
Cow position: chr22:12385275-12385059 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 146
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 94, 89

Conread position: 5-221
Cow position: chr22:12385359-12385143 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 161, 166

Conread position: 5-221
Cow position: chr22:12399117-12398901 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 170, 162

Conread position: 5-221
Cow position: chr22:12399537-12399321 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 78, 69

Conread position: 5-221
Cow position: chr22:12430929-12430713 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 154
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 5-221
Cow position: chr22:12431769-12431553 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 154
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 5-221
Cow position: chr22:12432357-12432141 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 158
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 95, 88

Conread position: 5-221
Cow position: chr22:12432441-12432225 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 154
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 162, 178

Conread position: 5-221
Cow position: chr22:12458217-12458001 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 149
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 68, 80

Conread position: 5-221
Cow position: chr22:12475578-12475362 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 163
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 5-221
Cow position: chr22:12475914-12475698 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 166, 178

Conread position: 5-221
Cow position: chr22:12476334-12476118 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 149
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 5-221
Cow position: chr22:12498925-12499141 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 154
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 5-221
Cow position: chr22:12499345-12499561 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 151
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 161, 178

Conread position: 5-221
Cow position: chr22:12499681-12499897 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 164
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 164, 171

Conread position: 5-221
Cow position: chr22:14429869-14430085 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 144
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 6-210
Cow position: chr22:11641250-11641454 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 139
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 74, 82

Conread position: 11-213
Cow position: chr22:12458631-12458429 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 138
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 11-221
Cow position: chr22:11641003-11641213 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 143
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 172, 152

Conread position: 12-221
Cow position: chr22:12431846-12431637 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 141
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 66, 72

Conread position: 12-221
Cow position: chr22:12458546-12458337 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 143
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 13-219
Cow position: chr22:12476410-12476204 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 135
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-219
Cow position: chr22:12498849-12499055 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 135
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-221
Cow position: chr22:12399445-12399237 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 65, 72

Conread position: 13-221
Cow position: chr22:12499605-12499813 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 13-221
Cow position: chr22:14429961-14430169 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 138
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 151, 165

Conread position: 13-221
Cow position: chr22:14430045-14430253 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 137
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 13-221
Cow position: chr22:14468122-14468330 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 141
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 151, 166

Conread position: 13-221
Cow position: chr22:14468206-14468414 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 136
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 14-219
Cow position: chr22:12385604-12385397 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 146
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 144, 162

Conread position: 14-219
Cow position: chr22:12399360-12399155 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 14-219
Cow position: chr22:14430550-14430755 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 142
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 62, 74

Conread position: 14-220
Cow position: chr22:12385182-12384976 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 150, 168

Conread position: 14-220
Cow position: chr22:12399024-12398818 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 150, 163

Conread position: 14-221
Cow position: chr22:12431088-12430881 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 146
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 161, 146

Conread position: 14-221
Cow position: chr22:12475737-12475530 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 145
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 14-221
Cow position: chr22:12499522-12499729 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 151
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 14-221
Cow position: chr22:14429710-14429917 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 141
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 14-221
Cow position: chr22:14429794-14430001 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 145
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 14-221
Cow position: chr22:14430718-14430925 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 137
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 14-221
Cow position: chr22:14468039-14468246 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 143
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 82, 73

Conread position: 15-219
Cow position: chr22:46654498-46654702 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 145
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 96, 91

Conread position: 18-219
Cow position: chr22:14442028-14442229 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 133
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 18-220
Cow position: chr22:14430134-14430336 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 136
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 81, 66

Conread position: 19-220
Cow position: chr22:12399607-12399406 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 139
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 143, 158

Conread position: 19-221
Cow position: chr22:11641179-11641381 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 140
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 19-221
Cow position: chr22:11701422-11701624 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 136
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 19-221
Cow position: chr22:12476068-12475866 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 136
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 23-220
Cow position: chr22:46654254-46654451 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 133
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 145, 138

Show alignments to all cow chromosomes.