Cow genome map
| Conread name: | raor034_k9.y1 |
| Conread position: | 3-221 |
| Cow position: | chr23:25626167-25626385 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 164, 180 |
| Conread position: | 4-221 |
| Cow position: | chr23:24535991-24535774 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-221 |
| Cow position: | chr23:24626362-24626579 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 165, 173 |
| Conread position: | 4-221 |
| Cow position: | chr23:24639354-24639571 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 27, 35 |
| Conread position: | 5-162 |
| Cow position: | chr23:24522345-24522188 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-219 |
| Cow position: | chr23:24546855-24546641 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-219 |
| Cow position: | chr23:24626279-24626493 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 161, 172 |
| Conread position: | 5-219 |
| Cow position: | chr23:24626447-24626661 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-219 |
| Cow position: | chr23:25660374-25660588 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 162, 172 |
| Conread position: | 5-219 |
| Cow position: | chr23:25698601-25698387 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-220 |
| Cow position: | chr23:24522513-24522298 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 164, 172 |
| Conread position: | 5-220 |
| Cow position: | chr23:24535738-24535523 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-220 |
| Cow position: | chr23:24546939-24546724 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 170, 159 |
| Conread position: | 5-220 |
| Cow position: | chr23:24547023-24546808 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 154, 172 |
| Conread position: | 5-220 |
| Cow position: | chr23:24547191-24546976 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-220 |
| Cow position: | chr23:24639607-24639822 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 178, 172 |
| Conread position: | 5-221 |
| Cow position: | chr23:24535906-24535690 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 164, 172 |
| Conread position: | 5-221 |
| Cow position: | chr23:24547107-24546891 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 161, 172 |
| Conread position: | 5-221 |
| Cow position: | chr23:24547275-24547059 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 161 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-221 |
| Cow position: | chr23:24626531-24626745 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 191, 0 |
| Conread position: | 5-221 |
| Cow position: | chr23:25660290-25660506 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-220 |
| Cow position: | chr23:24639699-24639906 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 79, 86 |
| Conread position: | 13-221 |
| Cow position: | chr23:25626093-25626301 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 156, 169 |
| Conread position: | 13-221 |
| Cow position: | chr23:25626762-25626970 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 155, 164 |
| Conread position: | 19-219 |
| Cow position: | chr23:24560821-24560621 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 19-220 |
| Cow position: | chr23:24522415-24522214 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 19-220 |
| Cow position: | chr23:24560653-24560452 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 19-220 |
| Cow position: | chr23:25660220-25660421 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 172, 166 |
| Conread position: | 19-220 |
| Cow position: | chr23:25724058-25723857 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 29-221 |
| Cow position: | chr23:24536050-24535858 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 135, 149 |
| Conread position: | 29-221 |
| Cow position: | chr23:25660146-25660338 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 30-221 |
| Cow position: | chr23:24547334-24547143 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 145, 131 |
| Conread position: | 35-220 |
| Cow position: | chr23:24522567-24522382 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 132, 147 |
| Conread position: | 35-220 |
| Cow position: | chr23:25626535-25626717 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 35-221 |
| Cow position: | chr23:24560889-24560703 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 133, 143 |
| Conread position: | 38-221 |
| Cow position: | chr23:24560718-24560535 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 129, 139 |
| Conread position: | 45-221 |
| Cow position: | chr23:25698645-25698469 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 35, 29 |
| Conread position: | 54-220 |
| Cow position: | chr23:25724107-25723941 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 121, 110 |
Show alignments to all cow chromosomes.