Cow genome map
| Conread name: | raor034_k9.y1 |
| Conread position: | 1-215 |
| Cow position: | chr28:9290053-9290266 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 8, 155 |
| Conread position: | 5-138 |
| Cow position: | chr28:7810813-7810946 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-218 |
| Cow position: | chr28:7810561-7810774 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 75, 70 |
| Conread position: | 5-220 |
| Cow position: | chr28:7757554-7757769 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-220 |
| Cow position: | chr28:7757806-7758021 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 163, 170 |
| Conread position: | 5-220 |
| Cow position: | chr28:7810402-7810608 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 163, 136 |
| Conread position: | 5-220 |
| Cow position: | chr28:11334167-11333952 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 59, 73 |
| Conread position: | 5-221 |
| Cow position: | chr28:7757722-7757938 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 164, 177 |
| Conread position: | 5-221 |
| Cow position: | chr28:7758462-7758678 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 144, 171 |
| Conread position: | 5-221 |
| Cow position: | chr28:7810645-7810861 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 170, 165 |
| Conread position: | 5-221 |
| Cow position: | chr28:7810729-7810945 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-221 |
| Cow position: | chr28:9253157-9253373 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-221 |
| Cow position: | chr28:9290142-9290354 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 6-221 |
| Cow position: | chr28:34679334-34679130 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 75, 68 |
| Conread position: | 10-211 |
| Cow position: | chr28:7758635-7758835 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 135, 145 |
| Conread position: | 12-209 |
| Cow position: | chr28:9299366-9299563 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 163, 155 |
| Conread position: | 12-219 |
| Cow position: | chr28:7758065-7758272 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 89, 93 |
| Conread position: | 12-219 |
| Cow position: | chr28:7758553-7758760 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 135, 142 |
| Conread position: | 12-220 |
| Cow position: | chr28:7757645-7757853 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 12-220 |
| Cow position: | chr28:9298962-9299168 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 157, 32 |
| Conread position: | 13-215 |
| Cow position: | chr28:7757898-7758100 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-220 |
| Cow position: | chr28:7810326-7810533 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-221 |
| Cow position: | chr28:7757478-7757686 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-221 |
| Cow position: | chr28:9253249-9253457 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-221 |
| Cow position: | chr28:9299283-9299491 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 14-220 |
| Cow position: | chr28:7757983-7758189 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 62, 70 |
| Conread position: | 14-221 |
| Cow position: | chr28:7758387-7758594 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 160, 153 |
| Conread position: | 14-221 |
| Cow position: | chr28:9253082-9253289 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 14-221 |
| Cow position: | chr28:11334242-11334035 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 133, 140 |
| Conread position: | 19-221 |
| Cow position: | chr28:9290403-9290604 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 20-221 |
| Cow position: | chr28:9253004-9253205 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 144, 157 |
| Conread position: | 20-221 |
| Cow position: | chr28:9290237-9290437 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 26-221 |
| Cow position: | chr28:9298643-9298835 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 54, 22 |
| Conread position: | 32-220 |
| Cow position: | chr28:9299218-9299406 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 54-220 |
| Cow position: | chr28:7810283-7810449 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 113, 121 |
Show alignments to all cow chromosomes.