Cow genome map
| Conread name: | raor034_k9.y1 | 
| Conread position: | 1-221 | 
| Cow position: | chr6:49341209-49341430 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 6, 0 | 
| Conread position: | 5-219 | 
| Cow position: | chr6:49340458-49340672 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 5-219 | 
| Cow position: | chr6:49340626-49340840 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 5-219 | 
| Cow position: | chr6:49340962-49341176 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 5-221 | 
| Cow position: | chr6:49340542-49340758 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 5-221 | 
| Cow position: | chr6:49340710-49340926 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 5-221 | 
| Cow position: | chr6:49340794-49341010 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 161, 172 | 
| Conread position: | 5-221 | 
| Cow position: | chr6:49341046-49341262 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 5-221 | 
| Cow position: | chr6:49341130-49341346 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 161, 172 | 
| Conread position: | 18-221 | 
| Cow position: | chr6:49340387-49340590 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 7e-37 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 19-221 | 
| Cow position: | chr6:49340892-49341094 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 0, 0 | 
Show alignments to all cow chromosomes.
