Cow genome map
| Conread name: | raor034_k9.y1 |
| Conread position: | 5-210 |
| Cow position: | chrX:25324777-25324572 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 164, 178 |
| Conread position: | 5-215 |
| Cow position: | chrX:25324525-25324315 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 72, 79 |
| Conread position: | 5-219 |
| Cow position: | chrX:25325029-25324815 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-219 |
| Cow position: | chrX:25325365-25325151 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-219 |
| Cow position: | chrX:25325533-25325319 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-219 |
| Cow position: | chrX:25325701-25325487 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 59, 67 |
| Conread position: | 5-219 |
| Cow position: | chrX:29044954-29044740 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 163 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 170, 162 |
| Conread position: | 5-219 |
| Cow position: | chrX:29045038-29044824 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 163 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 170, 165 |
| Conread position: | 5-219 |
| Cow position: | chrX:29045206-29044992 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-219 |
| Cow position: | chrX:29045773-29045559 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 64, 73 |
| Conread position: | 5-220 |
| Cow position: | chrX:25309860-25310075 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 71, 79 |
| Conread position: | 5-220 |
| Cow position: | chrX:25309944-25310159 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 170, 163 |
| Conread position: | 5-220 |
| Cow position: | chrX:25310028-25310243 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 75, 81 |
| Conread position: | 5-220 |
| Cow position: | chrX:29045689-29045474 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 170, 165 |
| Conread position: | 5-221 |
| Cow position: | chrX:25309776-25309992 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 164, 171 |
| Conread position: | 5-221 |
| Cow position: | chrX:29044870-29044654 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 170, 163 |
| Conread position: | 8-219 |
| Cow position: | chrX:29045287-29045076 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 155, 175 |
| Conread position: | 9-219 |
| Cow position: | chrX:25325445-25325235 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 166, 151 |
| Conread position: | 10-214 |
| Cow position: | chrX:25325192-25324988 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 11-219 |
| Cow position: | chrX:25310370-25310578 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 67, 77 |
| Conread position: | 11-219 |
| Cow position: | chrX:25324855-25324647 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 11-219 |
| Cow position: | chrX:25325275-25325067 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 158, 172 |
| Conread position: | 13-221 |
| Cow position: | chrX:25310204-25310412 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 64, 75 |
| Conread position: | 19-221 |
| Cow position: | chrX:25310294-25310496 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 20-219 |
| Cow position: | chrX:25325098-25324899 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 20-221 |
| Cow position: | chrX:25324678-25324477 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 24-219 |
| Cow position: | chrX:25325598-25325403 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 151, 142 |
| Conread position: | 25-219 |
| Cow position: | chrX:29045837-29045643 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 51, 61 |
Show alignments to all cow chromosomes.