Cow genome map
| Conread name: | rcbe16_h13.y1 |
| Conread position: | 1-207 |
| Cow position: | chr1:101281305-101281094 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 76, 25 |
| Conread position: | 1-242 |
| Cow position: | chr1:42869525-42869277 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 76, 56 |
| Conread position: | 1-249 |
| Cow position: | chr1:53208069-53207804 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 196 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 79, 178 |
| Conread position: | 1-252 |
| Cow position: | chr1:41004741-41004471 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 206 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 76, 178 |
| Conread position: | 1-254 |
| Cow position: | chr1:61725487-61725215 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 179 |
| Conread position: | 1-256 |
| Cow position: | chr1:83604-83873 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 202 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 75, 175 |
| Conread position: | 1-256 |
| Cow position: | chr1:4032276-4032521 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 156, 80 |
| Conread position: | 1-256 |
| Cow position: | chr1:53520538-53520803 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 113 |
| Conread position: | 1-256 |
| Cow position: | chr1:78783173-78783442 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 12 |
| Conread position: | 1-259 |
| Cow position: | chr1:9437920-9437650 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 197 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 88, 75 |
| Conread position: | 1-259 |
| Cow position: | chr1:29462473-29462750 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 106, 32 |
| Conread position: | 1-262 |
| Cow position: | chr1:60032976-60032697 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 209 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 75, 178 |
| Conread position: | 1-262 |
| Cow position: | chr1:68446172-68445903 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 104, 80 |
| Conread position: | 1-264 |
| Cow position: | chr1:67577703-67577972 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 101, 55 |
| Conread position: | 1-268 |
| Cow position: | chr1:44769483-44769206 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 212 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 92, 151 |
| Conread position: | 1-268 |
| Cow position: | chr1:54199754-54199475 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 211 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 79, 164 |
| Conread position: | 1-268 |
| Cow position: | chr1:66356083-66355806 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 85, 152 |
| Conread position: | 1-268 |
| Cow position: | chr1:91142512-91142247 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 196 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 120, 70 |
| Conread position: | 1-271 |
| Cow position: | chr1:28176636-28176910 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 200 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 51, 114 |
| Conread position: | 1-272 |
| Cow position: | chr1:88911269-88910978 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 202 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 83, 68 |
| Conread position: | 1-275 |
| Cow position: | chr1:84255384-84255672 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 214 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 76, 19 |
| Conread position: | 1-279 |
| Cow position: | chr1:95017885-95017602 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 173 |
| Conread position: | 1-326 |
| Cow position: | chr1:46821639-46821979 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 178 |
| Conread position: | 1-426 |
| Cow position: | chr1:101551083-101551545 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 320 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 76, 178 |
| Conread position: | 1-427 |
| Cow position: | chr1:102647643-102647190 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 178 |
| Conread position: | 1-431 |
| Cow position: | chr1:92433647-92434087 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 139 |
| Conread position: | 1-432 |
| Cow position: | chr1:68951269-68951713 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 307 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 77, 107 |
| Conread position: | 1-432 |
| Cow position: | chr1:101634331-101634800 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 325 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 79, 103 |
| Conread position: | 1-435 |
| Cow position: | chr1:22826793-22827249 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 180 |
| Conread position: | 1-457 |
| Cow position: | chr1:37309884-37309406 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 149 |
| Conread position: | 1-467 |
| Cow position: | chr1:89349608-89350086 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 68 |
| Conread position: | 1-484 |
| Cow position: | chr1:68818183-68817661 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 183 |
| Conread position: | 1-489 |
| Cow position: | chr1:7739599-7740092 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 333 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 76, 149 |
| Conread position: | 1-492 |
| Cow position: | chr1:23634271-23633782 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 176 |
| Conread position: | 1-493 |
| Cow position: | chr1:43353023-43352507 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 143 |
| Conread position: | 1-493 |
| Cow position: | chr1:45007096-45007623 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 355 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 111, 73 |
| Conread position: | 1-493 |
| Cow position: | chr1:54258198-54258715 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 116 |
| Conread position: | 1-493 |
| Cow position: | chr1:99642733-99642223 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 346 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 156, 21 |
| Conread position: | 2-254 |
| Cow position: | chr1:100790280-100790023 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 189 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 75, 21 |
| Conread position: | 2-263 |
| Cow position: | chr1:69695381-69695100 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 10, 176 |
| Conread position: | 2-428 |
| Cow position: | chr1:97761256-97761684 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 296 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 82, 116 |
| Conread position: | 2-464 |
| Cow position: | chr1:94226921-94226435 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 177 |
| Conread position: | 2-478 |
| Cow position: | chr1:41696688-41697192 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 123 |
| Conread position: | 2-484 |
| Cow position: | chr1:84812323-84811802 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 355 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 76, 190 |
| Conread position: | 3-247 |
| Cow position: | chr1:97755146-97755403 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 74, 135 |
| Conread position: | 3-268 |
| Cow position: | chr1:11854062-11853778 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 212 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 81, 176 |
| Conread position: | 3-497 |
| Cow position: | chr1:22823568-22824059 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 174 |
| Conread position: | 4-436 |
| Cow position: | chr1:81228701-81228241 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 44 |
| Conread position: | 4-493 |
| Cow position: | chr1:52496407-52496919 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 28 |
| Conread position: | 4-497 |
| Cow position: | chr1:96018901-96019381 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 39 |
| Conread position: | 5-258 |
| Cow position: | chr1:98073913-98074180 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 36, 136 |
| Conread position: | 5-268 |
| Cow position: | chr1:1801778-1802047 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 18 |
| Conread position: | 5-269 |
| Cow position: | chr1:100400568-100400293 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 144 |
| Conread position: | 5-277 |
| Cow position: | chr1:6321835-6322128 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 79, 13 |
| Conread position: | 5-278 |
| Cow position: | chr1:31765764-31765475 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 212 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 71, 172 |
| Conread position: | 6-494 |
| Cow position: | chr1:1877660-1878169 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 17 |
| Conread position: | 7-209 |
| Cow position: | chr1:42359886-42360107 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 10, 184 |
| Conread position: | 7-268 |
| Cow position: | chr1:12596272-12595997 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 175 |
| Conread position: | 7-268 |
| Cow position: | chr1:55135474-55135740 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 202 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 30, 108 |
| Conread position: | 7-279 |
| Cow position: | chr1:63391140-63390854 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 210 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 73, 170 |
| Conread position: | 7-483 |
| Cow position: | chr1:52753533-52753021 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 16 |
| Conread position: | 8-263 |
| Cow position: | chr1:76223058-76222787 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 205 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 69, 171 |
| Conread position: | 8-290 |
| Cow position: | chr1:100132513-100132798 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 99, 61 |
| Conread position: | 8-491 |
| Cow position: | chr1:91817138-91816624 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 111 |
| Conread position: | 8-492 |
| Cow position: | chr1:72069193-72068686 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 44 |
| Conread position: | 8-493 |
| Cow position: | chr1:11914239-11913728 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 342 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 69, 107 |
| Conread position: | 9-478 |
| Cow position: | chr1:11728827-11729309 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 325 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 68, 130 |
| Conread position: | 10-489 |
| Cow position: | chr1:91066513-91066007 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 333 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 67, 169 |
| Conread position: | 15-493 |
| Cow position: | chr1:66898839-66898348 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 94 |
| Conread position: | 16-489 |
| Cow position: | chr1:100551603-100552116 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 343 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 61, 171 |
| Conread position: | 25-268 |
| Cow position: | chr1:96478331-96478602 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 53, 168 |
| Conread position: | 27-269 |
| Cow position: | chr1:89834887-89835139 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 194 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 50, 207 |
| Conread position: | 27-299 |
| Cow position: | chr1:92048485-92048771 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 41, 155 |
| Conread position: | 27-436 |
| Cow position: | chr1:20204677-20205119 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 314 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 57, 153 |
| Conread position: | 27-465 |
| Cow position: | chr1:82880317-82880765 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 311 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 53, 146 |
| Conread position: | 34-268 |
| Cow position: | chr1:5873314-5873064 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 43, 146 |
| Conread position: | 35-268 |
| Cow position: | chr1:98562820-98563070 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 45, 144 |
| Conread position: | 36-457 |
| Cow position: | chr1:95215515-95215077 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 74 |
| Conread position: | 43-489 |
| Cow position: | chr1:73960368-73960843 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 329 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 34, 138 |
| Conread position: | 46-268 |
| Cow position: | chr1:43211449-43211678 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 38, 133 |
| Conread position: | 56-471 |
| Cow position: | chr1:80988030-80988473 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 120 |
| Conread position: | 59-263 |
| Cow position: | chr1:95100650-95100865 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 17, 115 |
| Conread position: | 61-256 |
| Cow position: | chr1:73561963-73561754 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 16, 77 |
| Conread position: | 61-268 |
| Cow position: | chr1:88652317-88652537 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 16, 91 |
| Conread position: | 83-268 |
| Cow position: | chr1:22448874-22448680 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 20, 91 |
| Conread position: | 85-263 |
| Cow position: | chr1:33811646-33811831 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 20, 92 |
| Conread position: | 85-263 |
| Cow position: | chr1:61304393-61304584 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 20, 94 |
| Conread position: | 85-436 |
| Cow position: | chr1:68845768-68845398 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 273 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 27, 66 |
| Conread position: | 87-488 |
| Cow position: | chr1:18937119-18936694 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 293 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 18, 41 |
| Conread position: | 91-490 |
| Cow position: | chr1:634909-635340 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 297 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 14, 86 |
| Conread position: | 95-493 |
| Cow position: | chr1:52488234-52487832 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 272 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 7, 70 |
| Conread position: | 98-493 |
| Cow position: | chr1:61742240-61741817 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 293 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 50, 77 |
| Conread position: | 99-491 |
| Cow position: | chr1:42968585-42968172 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 287 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 58, 18 |
| Conread position: | 100-270 |
| Cow position: | chr1:55686489-55686308 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 64, 72 |
| Conread position: | 100-443 |
| Cow position: | chr1:40599782-40600144 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 122, 51 |
| Conread position: | 100-446 |
| Cow position: | chr1:71748277-71747919 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 251 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 57, 74 |
| Conread position: | 100-458 |
| Cow position: | chr1:97954718-97954354 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 55, 73 |
| Conread position: | 100-486 |
| Cow position: | chr1:33997182-33996782 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 275 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 57, 74 |
| Conread position: | 100-491 |
| Cow position: | chr1:73546185-73545764 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 277 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 56, 168 |
| Conread position: | 108-268 |
| Cow position: | chr1:52506806-52506647 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 50, 65 |
| Conread position: | 113-436 |
| Cow position: | chr1:39427238-39426913 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 244 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 44, 34 |
| Conread position: | 114-268 |
| Cow position: | chr1:75967180-75967338 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 43, 57 |
| Conread position: | 116-279 |
| Cow position: | chr1:64160087-64160257 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 31, 59 |
| Conread position: | 116-486 |
| Cow position: | chr1:21835694-21836071 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 257 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 42, 59 |
| Conread position: | 118-255 |
| Cow position: | chr1:72141312-72141455 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 39, 56 |
| Conread position: | 118-260 |
| Cow position: | chr1:96713066-96712914 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 39, 56 |
| Conread position: | 118-268 |
| Cow position: | chr1:81363742-81363891 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 25, 54 |
| Conread position: | 118-269 |
| Cow position: | chr1:61246403-61246251 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 104, 54 |
| Conread position: | 118-455 |
| Cow position: | chr1:5135943-5135599 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 37, 55 |
| Conread position: | 118-486 |
| Cow position: | chr1:65103383-65103756 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 270 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 24, 57 |
| Conread position: | 118-493 |
| Cow position: | chr1:6941214-6941612 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 282 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 39, 29 |
| Conread position: | 118-493 |
| Cow position: | chr1:6958627-6959025 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 281 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 39, 29 |
| Conread position: | 119-491 |
| Cow position: | chr1:74084440-74084044 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 269 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 103, 52 |
| Conread position: | 121-477 |
| Cow position: | chr1:49839257-49839617 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 241 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 27, 54 |
| Conread position: | 121-490 |
| Cow position: | chr1:80422052-80422416 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 29, 54 |
| Conread position: | 124-436 |
| Cow position: | chr1:51531527-51531843 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 33, 50 |
| Conread position: | 126-291 |
| Cow position: | chr1:51445635-51445808 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 31, 48 |
| Conread position: | 127-480 |
| Cow position: | chr1:3962927-3962552 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 242 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 30, 47 |
| Conread position: | 130-427 |
| Cow position: | chr1:44506728-44507056 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 230 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 27, 37 |
| Conread position: | 137-497 |
| Cow position: | chr1:10942325-10941948 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 266 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 20, 37 |
| Conread position: | 153-493 |
| Cow position: | chr1:8287828-8287484 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 60, 18 |
| Conread position: | 203-489 |
| Cow position: | chr1:78096779-78097068 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 54, 147 |
| Conread position: | 221-492 |
| Cow position: | chr1:87197688-87197965 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 54, 30 |
| Conread position: | 222-492 |
| Cow position: | chr1:86113533-86113251 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 253-486 |
| Cow position: | chr1:8347032-8347265 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 8, 71 |
| Conread position: | 253-486 |
| Cow position: | chr1:95153129-95153364 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 39, 95 |
| Conread position: | 260-471 |
| Cow position: | chr1:74927799-74928011 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 32, 45 |
| Conread position: | 260-493 |
| Cow position: | chr1:53369998-53370232 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 32, 68 |
| Conread position: | 260-493 |
| Cow position: | chr1:55429040-55428807 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 30, 61 |
| Conread position: | 260-493 |
| Cow position: | chr1:65318493-65318723 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 32, 77 |
| Conread position: | 262-478 |
| Cow position: | chr1:92989508-92989724 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 30, 57 |
| Conread position: | 262-489 |
| Cow position: | chr1:42869020-42868795 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 31, 66 |
| Conread position: | 262-490 |
| Cow position: | chr1:20950640-20950860 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 30, 58 |
| Conread position: | 262-491 |
| Cow position: | chr1:3323790-3324018 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 148, 23 |
| Conread position: | 262-491 |
| Cow position: | chr1:64804183-64803953 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 197, 80 |
| Conread position: | 262-493 |
| Cow position: | chr1:34856712-34856479 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 30, 83 |
| Conread position: | 262-493 |
| Cow position: | chr1:46030878-46031109 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 27, 44 |
| Conread position: | 262-493 |
| Cow position: | chr1:47886567-47886334 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 30, 76 |
| Conread position: | 262-493 |
| Cow position: | chr1:72813533-72813765 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 26, 61 |
| Conread position: | 262-493 |
| Cow position: | chr1:75250030-75250259 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 30, 84 |
| Conread position: | 262-494 |
| Cow position: | chr1:79660483-79660252 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 26, 54 |
| Conread position: | 262-494 |
| Cow position: | chr1:80841571-80841794 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 30, 59 |
| Conread position: | 262-494 |
| Cow position: | chr1:89448816-89449047 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 41, 65 |
| Conread position: | 263-465 |
| Cow position: | chr1:4032548-4032753 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 29, 60 |
| Conread position: | 266-493 |
| Cow position: | chr1:98467730-98467947 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 171, 26 |
| Conread position: | 267-486 |
| Cow position: | chr1:81580093-81580319 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 25, 135 |
| Conread position: | 289-491 |
| Cow position: | chr1:19515666-19515470 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 170, 18 |
| Conread position: | 340-497 |
| Cow position: | chr1:95152867-95153024 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 97, 104 |
| Conread position: | 342-491 |
| Cow position: | chr1:36688380-36688232 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 342-493 |
| Cow position: | chr1:95835800-95835649 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 345-491 |
| Cow position: | chr1:69691714-69691568 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 24, 18 |
Show alignments to all cow chromosomes.