Cow genome map

Conread name: rcbe16_h13.y1

Conread position: 1-211
Cow position:
Alignm length: 221
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 88

Conread position: 1-217
Cow position:
Alignm length: 224
Alignm identity: 170
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 79, 151

Conread position: 1-220
Cow position:
Alignm length: 232
Alignm identity: 171
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 83, 55

Conread position: 1-238
Cow position:
Alignm length: 250
Alignm identity: 189
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 76, 179

Conread position: 1-245
Cow position:
Alignm length: 251
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 177

Conread position: 1-246
Cow position:
Alignm length: 260
Alignm identity: 198
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 81, 179

Conread position: 1-249
Cow position:
Alignm length: 260
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 83

Conread position: 1-252
Cow position:
Alignm length: 273
Alignm identity: 201
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 31, 127

Conread position: 1-255
Cow position:
Alignm length: 268
Alignm identity: 203
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 83, 148

Conread position: 1-256
Cow position:
Alignm length: 273
Alignm identity: 205
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 72, 177

Conread position: 1-261
Cow position:
Alignm length: 274
Alignm identity: 202
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 76, 48

Conread position: 1-262
Cow position:
Alignm length: 280
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 27

Conread position: 1-262
Cow position:
Alignm length: 279
Alignm identity: 202
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 79, 176

Conread position: 1-262
Cow position:
Alignm length: 275
Alignm identity: 205
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 86, 65

Conread position: 1-263
Cow position:
Alignm length: 278
Alignm identity: 200
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 83, 111

Conread position: 1-263
Cow position:
Alignm length: 281
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 179

Conread position: 1-263
Cow position:
Alignm length: 268
Alignm identity: 201
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 83, 160

Conread position: 1-263
Cow position:
Alignm length: 272
Alignm identity: 198
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 87, 152

Conread position: 1-263
Cow position:
Alignm length: 271
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 151

Conread position: 1-267
Cow position:
Alignm length: 287
Alignm identity: 206
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 76, 178

Conread position: 1-268
Cow position:
Alignm length: 299
Alignm identity: 211
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 79, 187

Conread position: 1-268
Cow position:
Alignm length: 288
Alignm identity: 215
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 26, 178

Conread position: 1-268
Cow position:
Alignm length: 278
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 68

Conread position: 1-268
Cow position:
Alignm length: 284
Alignm identity: 207
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 12, 180

Conread position: 1-268
Cow position:
Alignm length: 281
Alignm identity: 209
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 79, 137

Conread position: 1-268
Cow position:
Alignm length: 289
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 188

Conread position: 1-271
Cow position:
Alignm length: 293
Alignm identity: 207
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 79, 190

Conread position: 1-423
Cow position:
Alignm length: 464
Alignm identity: 317
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 76, 68

Conread position: 1-426
Cow position:
Alignm length: 452
Alignm identity: 302
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 76, 179

Conread position: 1-436
Cow position:
Alignm length: 457
Alignm identity: 310
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 22, 16

Conread position: 1-455
Cow position:
Alignm length: 490
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 120

Conread position: 1-461
Cow position:
Alignm length: 482
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 62

Conread position: 1-465
Cow position:
Alignm length: 495
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 175

Conread position: 1-477
Cow position:
Alignm length: 491
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 157

Conread position: 1-478
Cow position:
Alignm length: 514
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 151

Conread position: 1-478
Cow position:
Alignm length: 517
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 180

Conread position: 1-486
Cow position:
Alignm length: 514
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 44

Conread position: 1-488
Cow position:
Alignm length: 524
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 151

Conread position: 1-489
Cow position:
Alignm length: 516
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 151

Conread position: 1-489
Cow position:
Alignm length: 521
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 176

Conread position: 1-491
Cow position:
Alignm length: 516
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 178

Conread position: 1-493
Cow position:
Alignm length: 534
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 187

Conread position: 1-493
Cow position:
Alignm length: 531
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 185

Conread position: 1-493
Cow position:
Alignm length: 529
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 185

Conread position: 1-493
Cow position:
Alignm length: 520
Alignm identity: 338
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 152, 80

Conread position: 1-493
Cow position:
Alignm length: 534
Alignm identity: 363
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 76, 155

Conread position: 1-493
Cow position:
Alignm length: 535
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 182

Conread position: 2-268
Cow position:
Alignm length: 273
Alignm identity: 200
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 78, 102

Conread position: 2-493
Cow position:
Alignm length: 531
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 92

Conread position: 2-493
Cow position:
Alignm length: 530
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 178

Conread position: 2-495
Cow position:
Alignm length: 526
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 150

Conread position: 3-478
Cow position:
Alignm length: 511
Alignm identity: 339
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 46, 175

Conread position: 7-484
Cow position:
Alignm length: 501
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 166

Conread position: 8-256
Cow position:
Alignm length: 275
Alignm identity: 200
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 69, 208

Conread position: 8-268
Cow position:
Alignm length: 268
Alignm identity: 197
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 76, 141

Conread position: 8-273
Cow position:
Alignm length: 276
Alignm identity: 188
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 69, 82

Conread position: 8-436
Cow position:
Alignm length: 471
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 15

Conread position: 8-455
Cow position:
Alignm length: 467
Alignm identity: 312
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 97, 30

Conread position: 8-477
Cow position:
Alignm length: 486
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 15

Conread position: 8-481
Cow position:
Alignm length: 513
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 176

Conread position: 8-493
Cow position:
Alignm length: 510
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 69

Conread position: 8-493
Cow position:
Alignm length: 520
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 169

Conread position: 9-491
Cow position:
Alignm length: 509
Alignm identity: 330
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 71, 167

Conread position: 14-491
Cow position:
Alignm length: 506
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 14

Conread position: 18-489
Cow position:
Alignm length: 507
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 162

Conread position: 20-489
Cow position:
Alignm length: 504
Alignm identity: 334
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 85, 159

Conread position: 23-262
Cow position:
Alignm length: 248
Alignm identity: 177
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 54, 83

Conread position: 23-486
Cow position:
Alignm length: 507
Alignm identity: 343
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 54, 30

Conread position: 24-456
Cow position:
Alignm length: 465
Alignm identity: 314
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 52, 146

Conread position: 28-222
Cow position:
Alignm length: 203
Alignm identity: 154
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 49, 151

Conread position: 30-465
Cow position:
Alignm length: 453
Alignm identity: 300
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 43, 146

Conread position: 32-478
Cow position:
Alignm length: 471
Alignm identity: 310
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 45, 113

Conread position: 33-281
Cow position:
Alignm length: 267
Alignm identity: 196
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 72, 144

Conread position: 44-433
Cow position:
Alignm length: 418
Alignm identity: 293
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 18, 23

Conread position: 44-493
Cow position:
Alignm length: 483
Alignm identity: 331
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 33, 92

Conread position: 56-268
Cow position:
Alignm length: 224
Alignm identity: 161
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 39, 31

Conread position: 56-471
Cow position:
Alignm length: 446
Alignm identity: 297
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 21, 120

Conread position: 57-493
Cow position:
Alignm length: 474
Alignm identity: 314
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 48, 121

Conread position: 60-268
Cow position:
Alignm length: 225
Alignm identity: 166
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 17, 49

Conread position: 75-260
Cow position:
Alignm length: 193
Alignm identity: 147
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 25, 55

Conread position: 75-493
Cow position:
Alignm length: 449
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 101

Conread position: 82-268
Cow position:
Alignm length: 202
Alignm identity: 157
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 25, 89

Conread position: 85-461
Cow position:
Alignm length: 396
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 63

Conread position: 85-491
Cow position:
Alignm length: 423
Alignm identity: 287
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 22, 92

Conread position: 85-491
Cow position:
Alignm length: 433
Alignm identity: 290
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 20, 92

Conread position: 86-256
Cow position:
Alignm length: 185
Alignm identity: 151
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 16, 91

Conread position: 87-256
Cow position:
Alignm length: 187
Alignm identity: 146
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 18, 90

Conread position: 87-268
Cow position:
Alignm length: 200
Alignm identity: 162
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 18, 57

Conread position: 99-448
Cow position:
Alignm length: 369
Alignm identity: 255
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 58, 75

Conread position: 99-493
Cow position:
Alignm length: 407
Alignm identity: 269
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 6, 75

Conread position: 100-257
Cow position:
Alignm length: 169
Alignm identity: 137
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 57, 74

Conread position: 100-470
Cow position:
Alignm length: 390
Alignm identity: 264
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 57, 74

Conread position: 104-486
Cow position:
Alignm length: 408
Alignm identity: 281
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 5, 71

Conread position: 109-275
Cow position:
Alignm length: 178
Alignm identity: 135
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 54, 65

Conread position: 109-436
Cow position:
Alignm length: 364
Alignm identity: 257
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 12, 48

Conread position: 109-458
Cow position:
Alignm length: 380
Alignm identity: 254
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 33, 67

Conread position: 109-465
Cow position:
Alignm length: 382
Alignm identity: 257
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 15, 40

Conread position: 109-481
Cow position:
Alignm length: 401
Alignm identity: 277
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 48, 64

Conread position: 110-268
Cow position:
Alignm length: 162
Alignm identity: 127
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 47, 64

Conread position: 110-314
Cow position:
Alignm length: 227
Alignm identity: 170
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 9, 47

Conread position: 110-486
Cow position:
Alignm length: 403
Alignm identity: 263
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 45, 65

Conread position: 111-246
Cow position:
Alignm length: 140
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 91, 60

Conread position: 112-486
Cow position:
Alignm length: 400
Alignm identity: 273
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 45, 62

Conread position: 113-268
Cow position:
Alignm length: 174
Alignm identity: 134
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 7, 63

Conread position: 115-491
Cow position:
Alignm length: 395
Alignm identity: 267
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 142, 37

Conread position: 115-493
Cow position:
Alignm length: 417
Alignm identity: 279
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 42, 59

Conread position: 115-497
Cow position:
Alignm length: 405
Alignm identity: 268
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 42, 59

Conread position: 116-268
Cow position:
Alignm length: 167
Alignm identity: 135
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 43, 31

Conread position: 118-255
Cow position:
Alignm length: 149
Alignm identity: 126
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 40, 56

Conread position: 118-268
Cow position:
Alignm length: 159
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 97, 53

Conread position: 118-268
Cow position:
Alignm length: 164
Alignm identity: 132
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 30, 54

Conread position: 120-220
Cow position:
Alignm length: 103
Alignm identity: 87
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 38, 53

Conread position: 120-256
Cow position:
Alignm length: 145
Alignm identity: 118
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 23, 55

Conread position: 123-485
Cow position:
Alignm length: 374
Alignm identity: 240
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 30, 51

Conread position: 124-263
Cow position:
Alignm length: 150
Alignm identity: 120
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 33, 23

Conread position: 133-268
Cow position:
Alignm length: 149
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 24, 41

Conread position: 134-268
Cow position:
Alignm length: 145
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 23, 41

Conread position: 135-489
Cow position:
Alignm length: 379
Alignm identity: 250
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 23, 39

Conread position: 137-493
Cow position:
Alignm length: 393
Alignm identity: 265
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 18, 35

Conread position: 144-493
Cow position:
Alignm length: 382
Alignm identity: 270
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 14, 30

Conread position: 232-491
Cow position:
Alignm length: 265
Alignm identity: 177
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 19, 74

Conread position: 262-491
Cow position:
Alignm length: 236
Alignm identity: 159
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 30, 54

Conread position: 262-491
Cow position:
Alignm length: 234
Alignm identity: 155
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 30, 77

Conread position: 262-491
Cow position:
Alignm length: 234
Alignm identity: 156
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 30, 54

Conread position: 262-491
Cow position:
Alignm length: 236
Alignm identity: 163
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 24, 61

Conread position: 262-492
Cow position:
Alignm length: 235
Alignm identity: 155
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 30, 57

Conread position: 262-493
Cow position:
Alignm length: 240
Alignm identity: 159
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 30, 84

Conread position: 262-493
Cow position:
Alignm length: 238
Alignm identity: 156
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 30, 177

Conread position: 262-493
Cow position:
Alignm length: 235
Alignm identity: 161
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 30, 78

Conread position: 262-493
Cow position:
Alignm length: 237
Alignm identity: 161
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 79

Conread position: 262-493
Cow position:
Alignm length: 234
Alignm identity: 159
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 26, 82

Conread position: 262-493
Cow position:
Alignm length: 238
Alignm identity: 167
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 29, 116

Conread position: 262-493
Cow position:
Alignm length: 243
Alignm identity: 168
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 30, 0

Conread position: 262-497
Cow position:
Alignm length: 239
Alignm identity: 166
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 26, 59

Conread position: 263-493
Cow position:
Alignm length: 236
Alignm identity: 164
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 10, 58

Conread position: 265-493
Cow position:
Alignm length: 234
Alignm identity: 160
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 24, 58

Conread position: 270-493
Cow position:
Alignm length: 228
Alignm identity: 157
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 46

Conread position: 284-486
Cow position:
Alignm length: 205
Alignm identity: 140
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 36, 59

Conread position: 286-491
Cow position:
Alignm length: 206
Alignm identity: 144
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 289-490
Cow position:
Alignm length: 203
Alignm identity: 138
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 167, 47

Conread position: 289-491
Cow position:
Alignm length: 205
Alignm identity: 140
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 35, 45

Conread position: 342-491
Cow position:
Alignm length: 150
Alignm identity: 110
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 123, 0

Show alignments to all cow chromosomes.