Cow genome map

Conread name: rcbe16_h13.y1

Conread position: 1-217
Cow position: chr14:26432826-26433042 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 104, 74

Conread position: 1-220
Cow position: chr14:16342019-16342242 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 176
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 79, 10

Conread position: 1-227
Cow position: chr14:18811691-18811926 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 186
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 54, 182

Conread position: 1-252
Cow position: chr14:27848623-27848355 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 207
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 79, 11

Conread position: 1-253
Cow position: chr14:34395247-34395510 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 201
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 76, 160

Conread position: 1-254
Cow position: chr14:19512964-19513221 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 203
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 156, 80

Conread position: 1-255
Cow position: chr14:35650778-35651051 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 208
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 83, 175

Conread position: 1-256
Cow position: chr14:33538505-33538767 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 135

Conread position: 1-257
Cow position: chr14:42918522-42918241 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 196
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 83, 186

Conread position: 1-260
Cow position: chr14:5501728-5502007 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 210
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 76, 178

Conread position: 1-263
Cow position: chr14:20666597-20666877 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 214
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 17, 155

Conread position: 1-263
Cow position: chr14:24992236-24991969 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 178

Conread position: 1-263
Cow position: chr14:34221478-34221202 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 203
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 79, 178

Conread position: 1-267
Cow position: chr14:21964540-21964264 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 216
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 76, 106

Conread position: 1-267
Cow position: chr14:36554734-36555012 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 219
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 76, 19

Conread position: 1-268
Cow position: chr14:19222305-19222023 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 216
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 72, 152

Conread position: 1-268
Cow position: chr14:25695793-25695522 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 203
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 104, 65

Conread position: 1-268
Cow position: chr14:39519131-39518836 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 219
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 76, 163

Conread position: 1-283
Cow position: chr14:40721506-40721801 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 203
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 79, 139

Conread position: 1-359
Cow position: chr14:27865714-27866088 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 254
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 76, 109

Conread position: 1-410
Cow position: chr14:8784599-8784178 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 294
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 76, 151

Conread position: 1-475
Cow position: chr14:34199419-34199926 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 340
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 76, 119

Conread position: 1-478
Cow position: chr14:14317305-14316801 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 340
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 76, 194

Conread position: 1-480
Cow position: chr14:25779519-25779015 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 347
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 83, 27

Conread position: 1-482
Cow position: chr14:41749348-41749851 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 335
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 66, 75

Conread position: 1-485
Cow position: chr14:39617962-39618469 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 32

Conread position: 1-491
Cow position: chr14:9110309-9110809 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 11

Conread position: 1-491
Cow position: chr14:18940887-18941384 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 81

Conread position: 1-491
Cow position: chr14:26116487-26115963 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 175

Conread position: 1-491
Cow position: chr14:28090551-28091060 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 119

Conread position: 1-491
Cow position: chr14:28304359-28304883 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 181

Conread position: 1-491
Cow position: chr14:28988114-28987593 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 55

Conread position: 1-492
Cow position: chr14:25385469-25385985 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 339
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 89, 113

Conread position: 1-493
Cow position: chr14:6735447-6735965 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 346
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 83, 88

Conread position: 1-493
Cow position: chr14:38143710-38144208 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 65

Conread position: 2-269
Cow position: chr14:46489834-46490118 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 211
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 75, 24

Conread position: 2-435
Cow position: chr14:27791957-27791501 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 310
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 58, 181

Conread position: 2-478
Cow position: chr14:41211292-41210771 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 359
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 78, 191

Conread position: 3-222
Cow position: chr14:47584227-47584452 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 176
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 77, 176

Conread position: 3-268
Cow position: chr14:27312860-27312566 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 213
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 78, 190

Conread position: 3-433
Cow position: chr14:41132281-41132697 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 308
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 104, 61

Conread position: 3-486
Cow position: chr14:34096170-34096659 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 145

Conread position: 4-493
Cow position: chr14:40230216-40230735 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 175

Conread position: 5-291
Cow position: chr14:11982073-11981775 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 174

Conread position: 6-254
Cow position: chr14:31734437-31734691 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 170

Conread position: 6-256
Cow position: chr14:21285041-21284780 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 197
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 151, 68

Conread position: 6-481
Cow position: chr14:41479240-41479751 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 174

Conread position: 8-237
Cow position: chr14:46735733-46735493 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 178
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 69, 175

Conread position: 8-494
Cow position: chr14:32574554-32574060 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 59

Conread position: 9-268
Cow position: chr14:14621769-14622033 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 204
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 6, 144

Conread position: 9-433
Cow position: chr14:47609190-47609623 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 302
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 68, 33

Conread position: 10-260
Cow position: chr14:29299951-29300214 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 192
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 70, 61

Conread position: 23-258
Cow position: chr14:20016306-20016550 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 187
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 61, 155

Conread position: 27-476
Cow position: chr14:42154564-42155058 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 329
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 56, 153

Conread position: 29-293
Cow position: chr14:37640628-37640352 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 199
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 51, 150

Conread position: 41-268
Cow position: chr14:33828528-33828302 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 174
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 36, 76

Conread position: 41-493
Cow position: chr14:42330736-42330248 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 325
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 59, 136

Conread position: 42-453
Cow position: chr14:8989211-8989634 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 138

Conread position: 43-268
Cow position: chr14:20712300-20712548 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 187
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 34, 136

Conread position: 59-479
Cow position: chr14:17013874-17013434 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 292
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 18, 120

Conread position: 74-485
Cow position: chr14:39926534-39926119 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 292
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 83, 39

Conread position: 76-252
Cow position: chr14:36585613-36585801 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 145
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 46, 100

Conread position: 85-485
Cow position: chr14:7291129-7290709 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 283
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 72, 17

Conread position: 91-263
Cow position: chr14:16310585-16310758 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 141
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 122, 42

Conread position: 97-474
Cow position: chr14:33247116-33247511 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 275
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 58, 12

Conread position: 100-461
Cow position: chr14:9308546-9308161 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 262
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 19, 75

Conread position: 108-268
Cow position: chr14:20932930-20932756 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 48, 63

Conread position: 109-279
Cow position: chr14:19996629-19996448 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 141
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 48, 66

Conread position: 109-279
Cow position: chr14:36709435-36709251 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 13, 40

Conread position: 109-478
Cow position: chr14:33751822-33751448 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 266
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 49, 65

Conread position: 110-256
Cow position: chr14:12856906-12856750 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 127
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 13, 38

Conread position: 112-256
Cow position: chr14:12488394-12488546 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 123
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 45, 62

Conread position: 112-494
Cow position: chr14:19593832-19594238 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 63

Conread position: 115-279
Cow position: chr14:30662292-30662118 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 42, 59

Conread position: 117-263
Cow position: chr14:15795507-15795659 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 126
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 40, 57

Conread position: 117-268
Cow position: chr14:15913251-15913406 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 37, 31

Conread position: 118-263
Cow position: chr14:34329357-34329507 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 39, 62

Conread position: 118-263
Cow position: chr14:34330841-34330691 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 39, 62

Conread position: 118-372
Cow position: chr14:41128192-41127917 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 201
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 95, 53

Conread position: 119-486
Cow position: chr14:38337850-38338227 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 254
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 76, 37

Conread position: 125-493
Cow position: chr14:14466185-14466558 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 253
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 32, 23

Conread position: 135-263
Cow position: chr14:19975502-19975371 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 23, 39

Conread position: 140-481
Cow position: chr14:19129791-19129417 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 265
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 17, 34

Conread position: 142-491
Cow position: chr14:3868152-3868527 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 246
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 13, 32

Conread position: 152-436
Cow position: chr14:33300947-33300660 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 201
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 61, 19

Conread position: 176-433
Cow position: chr14:3162940-3162685 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 174
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 81, 45

Conread position: 192-491
Cow position: chr14:20826698-20826395 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 200
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 21, 65

Conread position: 221-497
Cow position: chr14:40474732-40474460 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 187
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 68, 85

Conread position: 224-461
Cow position: chr14:23478989-23478758 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 163
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 39, 107

Conread position: 260-486
Cow position: chr14:42437159-42436931 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 160
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 9, 87

Conread position: 262-488
Cow position: chr14:50362924-50362698 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 159
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 30, 9

Conread position: 262-489
Cow position: chr14:40754114-40754346 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 159
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 30, 80

Conread position: 262-491
Cow position: chr14:7036225-7036456 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 155
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 30, 83

Conread position: 262-491
Cow position: chr14:26655002-26655233 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 26, 56

Conread position: 262-493
Cow position: chr14:28378490-28378258 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 159
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 30, 78

Conread position: 262-494
Cow position: chr14:11285705-11285479 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 160
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 28, 76

Conread position: 262-497
Cow position: chr14:20712560-20712792 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 159
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 83

Conread position: 271-493
Cow position: chr14:10693138-10693355 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 153
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 21, 39

Conread position: 290-491
Cow position: chr14:7198601-7198399 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 135
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 308-489
Cow position: chr14:28924248-28924071 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 127
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 5, 0

Conread position: 314-497
Cow position: chr14:34775666-34775851 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 18, 0

Show alignments to all cow chromosomes.