Cow genome map

Conread name: rcbe16_h13.y1

Conread position: 1-217
Cow position:
Alignm length: 225
Alignm identity: 162
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 104, 74

Conread position: 1-220
Cow position:
Alignm length: 228
Alignm identity: 176
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 79, 10

Conread position: 1-227
Cow position:
Alignm length: 239
Alignm identity: 186
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 54, 182

Conread position: 1-252
Cow position:
Alignm length: 271
Alignm identity: 207
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 79, 11

Conread position: 1-253
Cow position:
Alignm length: 267
Alignm identity: 201
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 76, 160

Conread position: 1-254
Cow position:
Alignm length: 265
Alignm identity: 203
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 156, 80

Conread position: 1-255
Cow position:
Alignm length: 276
Alignm identity: 208
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 83, 175

Conread position: 1-256
Cow position:
Alignm length: 268
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 135

Conread position: 1-257
Cow position:
Alignm length: 283
Alignm identity: 196
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 83, 186

Conread position: 1-260
Cow position:
Alignm length: 281
Alignm identity: 210
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 76, 178

Conread position: 1-263
Cow position:
Alignm length: 284
Alignm identity: 214
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 17, 155

Conread position: 1-263
Cow position:
Alignm length: 271
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 178

Conread position: 1-263
Cow position:
Alignm length: 279
Alignm identity: 203
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 79, 178

Conread position: 1-267
Cow position:
Alignm length: 284
Alignm identity: 216
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 76, 106

Conread position: 1-267
Cow position:
Alignm length: 287
Alignm identity: 219
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 76, 19

Conread position: 1-268
Cow position:
Alignm length: 287
Alignm identity: 216
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 72, 152

Conread position: 1-268
Cow position:
Alignm length: 282
Alignm identity: 203
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 104, 65

Conread position: 1-268
Cow position:
Alignm length: 298
Alignm identity: 219
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 76, 163

Conread position: 1-283
Cow position:
Alignm length: 302
Alignm identity: 203
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 79, 139

Conread position: 1-359
Cow position:
Alignm length: 380
Alignm identity: 254
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 76, 109

Conread position: 1-410
Cow position:
Alignm length: 431
Alignm identity: 294
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 76, 151

Conread position: 1-475
Cow position:
Alignm length: 512
Alignm identity: 340
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 76, 119

Conread position: 1-478
Cow position:
Alignm length: 515
Alignm identity: 340
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 76, 194

Conread position: 1-480
Cow position:
Alignm length: 516
Alignm identity: 347
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 83, 27

Conread position: 1-482
Cow position:
Alignm length: 510
Alignm identity: 335
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 66, 75

Conread position: 1-485
Cow position:
Alignm length: 515
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 32

Conread position: 1-491
Cow position:
Alignm length: 511
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 11

Conread position: 1-491
Cow position:
Alignm length: 506
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 81

Conread position: 1-491
Cow position:
Alignm length: 529
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 175

Conread position: 1-491
Cow position:
Alignm length: 519
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 119

Conread position: 1-491
Cow position:
Alignm length: 532
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 181

Conread position: 1-491
Cow position:
Alignm length: 538
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 55

Conread position: 1-492
Cow position:
Alignm length: 524
Alignm identity: 339
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 89, 113

Conread position: 1-493
Cow position:
Alignm length: 525
Alignm identity: 346
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 83, 88

Conread position: 1-493
Cow position:
Alignm length: 521
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 65

Conread position: 2-269
Cow position:
Alignm length: 288
Alignm identity: 211
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 75, 24

Conread position: 2-435
Cow position:
Alignm length: 461
Alignm identity: 310
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 58, 181

Conread position: 2-478
Cow position:
Alignm length: 531
Alignm identity: 359
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 78, 191

Conread position: 3-222
Cow position:
Alignm length: 228
Alignm identity: 176
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 77, 176

Conread position: 3-268
Cow position:
Alignm length: 297
Alignm identity: 213
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 78, 190

Conread position: 3-433
Cow position:
Alignm length: 445
Alignm identity: 308
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 104, 61

Conread position: 3-486
Cow position:
Alignm length: 503
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 145

Conread position: 4-493
Cow position:
Alignm length: 523
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 175

Conread position: 5-291
Cow position:
Alignm length: 303
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 174

Conread position: 6-254
Cow position:
Alignm length: 256
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 170

Conread position: 6-256
Cow position:
Alignm length: 266
Alignm identity: 197
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 151, 68

Conread position: 6-481
Cow position:
Alignm length: 517
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 174

Conread position: 8-237
Cow position:
Alignm length: 242
Alignm identity: 178
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 69, 175

Conread position: 8-494
Cow position:
Alignm length: 507
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 59

Conread position: 9-268
Cow position:
Alignm length: 270
Alignm identity: 204
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 6, 144

Conread position: 9-433
Cow position:
Alignm length: 452
Alignm identity: 302
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 68, 33

Conread position: 10-260
Cow position:
Alignm length: 266
Alignm identity: 192
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 70, 61

Conread position: 23-258
Cow position:
Alignm length: 246
Alignm identity: 187
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 61, 155

Conread position: 27-476
Cow position:
Alignm length: 497
Alignm identity: 329
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 56, 153

Conread position: 29-293
Cow position:
Alignm length: 279
Alignm identity: 199
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 51, 150

Conread position: 41-268
Cow position:
Alignm length: 233
Alignm identity: 174
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 36, 76

Conread position: 41-493
Cow position:
Alignm length: 493
Alignm identity: 325
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 59, 136

Conread position: 42-453
Cow position:
Alignm length: 435
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 138

Conread position: 43-268
Cow position:
Alignm length: 250
Alignm identity: 187
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 34, 136

Conread position: 59-479
Cow position:
Alignm length: 448
Alignm identity: 292
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 18, 120

Conread position: 74-485
Cow position:
Alignm length: 433
Alignm identity: 292
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 83, 39

Conread position: 76-252
Cow position:
Alignm length: 190
Alignm identity: 145
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 46, 100

Conread position: 85-485
Cow position:
Alignm length: 427
Alignm identity: 283
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 72, 17

Conread position: 91-263
Cow position:
Alignm length: 181
Alignm identity: 141
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 122, 42

Conread position: 97-474
Cow position:
Alignm length: 404
Alignm identity: 275
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 58, 12

Conread position: 100-461
Cow position:
Alignm length: 391
Alignm identity: 262
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 19, 75

Conread position: 108-268
Cow position:
Alignm length: 176
Alignm identity: 133
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 48, 63

Conread position: 109-279
Cow position:
Alignm length: 183
Alignm identity: 141
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 48, 66

Conread position: 109-279
Cow position:
Alignm length: 188
Alignm identity: 141
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 13, 40

Conread position: 109-478
Cow position:
Alignm length: 386
Alignm identity: 266
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 49, 65

Conread position: 110-256
Cow position:
Alignm length: 159
Alignm identity: 127
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 13, 38

Conread position: 112-256
Cow position:
Alignm length: 154
Alignm identity: 123
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 45, 62

Conread position: 112-494
Cow position:
Alignm length: 410
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 63

Conread position: 115-279
Cow position:
Alignm length: 177
Alignm identity: 134
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 42, 59

Conread position: 117-263
Cow position:
Alignm length: 156
Alignm identity: 126
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 40, 57

Conread position: 117-268
Cow position:
Alignm length: 158
Alignm identity: 122
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 37, 31

Conread position: 118-263
Cow position:
Alignm length: 153
Alignm identity: 119
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 39, 62

Conread position: 118-263
Cow position:
Alignm length: 153
Alignm identity: 119
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 39, 62

Conread position: 118-372
Cow position:
Alignm length: 283
Alignm identity: 201
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 95, 53

Conread position: 119-486
Cow position:
Alignm length: 389
Alignm identity: 254
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 76, 37

Conread position: 125-493
Cow position:
Alignm length: 386
Alignm identity: 253
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 32, 23

Conread position: 135-263
Cow position:
Alignm length: 134
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 23, 39

Conread position: 140-481
Cow position:
Alignm length: 378
Alignm identity: 265
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 17, 34

Conread position: 142-491
Cow position:
Alignm length: 377
Alignm identity: 246
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 13, 32

Conread position: 152-436
Cow position:
Alignm length: 296
Alignm identity: 201
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 61, 19

Conread position: 176-433
Cow position:
Alignm length: 263
Alignm identity: 174
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 81, 45

Conread position: 192-491
Cow position:
Alignm length: 309
Alignm identity: 200
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 21, 65

Conread position: 221-497
Cow position:
Alignm length: 283
Alignm identity: 187
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 68, 85

Conread position: 224-461
Cow position:
Alignm length: 241
Alignm identity: 163
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 39, 107

Conread position: 260-486
Cow position:
Alignm length: 233
Alignm identity: 160
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 9, 87

Conread position: 262-488
Cow position:
Alignm length: 231
Alignm identity: 159
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 30, 9

Conread position: 262-489
Cow position:
Alignm length: 236
Alignm identity: 159
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 30, 80

Conread position: 262-491
Cow position:
Alignm length: 234
Alignm identity: 155
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 30, 83

Conread position: 262-491
Cow position:
Alignm length: 236
Alignm identity: 162
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 26, 56

Conread position: 262-493
Cow position:
Alignm length: 236
Alignm identity: 159
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 30, 78

Conread position: 262-494
Cow position:
Alignm length: 235
Alignm identity: 160
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 28, 76

Conread position: 262-497
Cow position:
Alignm length: 239
Alignm identity: 159
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 83

Conread position: 271-493
Cow position:
Alignm length: 225
Alignm identity: 153
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 21, 39

Conread position: 290-491
Cow position:
Alignm length: 203
Alignm identity: 135
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 308-489
Cow position:
Alignm length: 182
Alignm identity: 127
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 5, 0

Conread position: 314-497
Cow position:
Alignm length: 186
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 18, 0

Show alignments to all cow chromosomes.