Cow genome map

Conread name: rcbe16_h13.y1

Conread position: 1-210
Cow position:
Alignm length: 219
Alignm identity: 161
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 79, 179

Conread position: 1-220
Cow position:
Alignm length: 230
Alignm identity: 173
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 79, 22

Conread position: 1-248
Cow position:
Alignm length: 253
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 175

Conread position: 1-252
Cow position:
Alignm length: 268
Alignm identity: 203
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 79, 177

Conread position: 1-254
Cow position:
Alignm length: 262
Alignm identity: 189
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 75, 35

Conread position: 1-256
Cow position:
Alignm length: 266
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 161

Conread position: 1-256
Cow position:
Alignm length: 267
Alignm identity: 201
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 83, 22

Conread position: 1-263
Cow position:
Alignm length: 268
Alignm identity: 180
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 76, 152

Conread position: 1-263
Cow position:
Alignm length: 276
Alignm identity: 193
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 88, 149

Conread position: 1-268
Cow position:
Alignm length: 283
Alignm identity: 191
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 18, 178

Conread position: 1-268
Cow position:
Alignm length: 281
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 80

Conread position: 1-268
Cow position:
Alignm length: 286
Alignm identity: 216
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 76, 123

Conread position: 1-269
Cow position:
Alignm length: 277
Alignm identity: 201
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 86, 178

Conread position: 1-279
Cow position:
Alignm length: 294
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 178

Conread position: 1-282
Cow position:
Alignm length: 297
Alignm identity: 208
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 76, 176

Conread position: 1-411
Cow position:
Alignm length: 431
Alignm identity: 295
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 104, 47

Conread position: 1-433
Cow position:
Alignm length: 452
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 87

Conread position: 1-435
Cow position:
Alignm length: 461
Alignm identity: 312
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 83, 113

Conread position: 1-436
Cow position:
Alignm length: 475
Alignm identity: 323
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 77, 182

Conread position: 1-436
Cow position:
Alignm length: 478
Alignm identity: 327
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 76, 153

Conread position: 1-460
Cow position:
Alignm length: 477
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 97

Conread position: 1-462
Cow position:
Alignm length: 503
Alignm identity: 332
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 49, 185

Conread position: 1-465
Cow position:
Alignm length: 491
Alignm identity: 331
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 83, 108

Conread position: 1-475
Cow position:
Alignm length: 494
Alignm identity: 327
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 86, 42

Conread position: 1-476
Cow position:
Alignm length: 511
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 177

Conread position: 1-488
Cow position:
Alignm length: 508
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 44

Conread position: 1-489
Cow position:
Alignm length: 527
Alignm identity: 352
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 79, 188

Conread position: 1-490
Cow position:
Alignm length: 525
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 114

Conread position: 1-491
Cow position:
Alignm length: 527
Alignm identity: 354
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 83, 17

Conread position: 1-493
Cow position:
Alignm length: 529
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 180

Conread position: 1-497
Cow position:
Alignm length: 536
Alignm identity: 356
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 77, 43

Conread position: 2-262
Cow position:
Alignm length: 272
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 118

Conread position: 2-263
Cow position:
Alignm length: 271
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 174

Conread position: 2-275
Cow position:
Alignm length: 284
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 177

Conread position: 2-435
Cow position:
Alignm length: 472
Alignm identity: 309
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 75, 86

Conread position: 2-436
Cow position:
Alignm length: 463
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 21

Conread position: 2-461
Cow position:
Alignm length: 480
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 159

Conread position: 2-463
Cow position:
Alignm length: 483
Alignm identity: 328
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 155, 74

Conread position: 2-492
Cow position:
Alignm length: 536
Alignm identity: 355
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 74, 69

Conread position: 3-485
Cow position:
Alignm length: 526
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 177

Conread position: 3-491
Cow position:
Alignm length: 511
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 106

Conread position: 4-306
Cow position:
Alignm length: 319
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 19

Conread position: 4-471
Cow position:
Alignm length: 501
Alignm identity: 331
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 73, 112

Conread position: 4-471
Cow position:
Alignm length: 504
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 134

Conread position: 6-492
Cow position:
Alignm length: 535
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 151

Conread position: 7-492
Cow position:
Alignm length: 496
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 7

Conread position: 8-256
Cow position:
Alignm length: 267
Alignm identity: 198
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 99, 166

Conread position: 8-256
Cow position:
Alignm length: 264
Alignm identity: 194
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 69, 169

Conread position: 8-263
Cow position:
Alignm length: 267
Alignm identity: 199
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 97, 61

Conread position: 8-489
Cow position:
Alignm length: 519
Alignm identity: 353
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 149, 56

Conread position: 9-220
Cow position:
Alignm length: 219
Alignm identity: 156
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 76, 143

Conread position: 9-258
Cow position:
Alignm length: 266
Alignm identity: 192
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 68, 167

Conread position: 9-325
Cow position:
Alignm length: 343
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 56

Conread position: 9-491
Cow position:
Alignm length: 511
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 167

Conread position: 10-263
Cow position:
Alignm length: 274
Alignm identity: 188
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 70, 175

Conread position: 10-268
Cow position:
Alignm length: 268
Alignm identity: 187
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 8, 169

Conread position: 11-364
Cow position:
Alignm length: 372
Alignm identity: 247
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 94, 44

Conread position: 18-461
Cow position:
Alignm length: 471
Alignm identity: 318
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 139, 34

Conread position: 20-461
Cow position:
Alignm length: 470
Alignm identity: 316
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 64, 90

Conread position: 23-279
Cow position:
Alignm length: 270
Alignm identity: 196
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 57, 153

Conread position: 23-279
Cow position:
Alignm length: 281
Alignm identity: 202
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 54, 38

Conread position: 23-493
Cow position:
Alignm length: 489
Alignm identity: 318
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 59, 9

Conread position: 25-491
Cow position:
Alignm length: 502
Alignm identity: 333
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 11, 17

Conread position: 28-279
Cow position:
Alignm length: 274
Alignm identity: 195
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 48, 41

Conread position: 28-489
Cow position:
Alignm length: 498
Alignm identity: 323
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 79, 41

Conread position: 29-263
Cow position:
Alignm length: 252
Alignm identity: 176
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 51, 144

Conread position: 29-436
Cow position:
Alignm length: 433
Alignm identity: 282
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 48, 145

Conread position: 33-249
Cow position:
Alignm length: 233
Alignm identity: 172
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 44, 143

Conread position: 38-492
Cow position:
Alignm length: 492
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 111

Conread position: 41-268
Cow position:
Alignm length: 256
Alignm identity: 184
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 39, 146

Conread position: 41-490
Cow position:
Alignm length: 481
Alignm identity: 322
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 36, 111

Conread position: 44-268
Cow position:
Alignm length: 240
Alignm identity: 182
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 36, 18

Conread position: 44-268
Cow position:
Alignm length: 241
Alignm identity: 188
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 33, 135

Conread position: 60-255
Cow position:
Alignm length: 214
Alignm identity: 157
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 20, 95

Conread position: 83-256
Cow position:
Alignm length: 191
Alignm identity: 147
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 22, 72

Conread position: 85-279
Cow position:
Alignm length: 208
Alignm identity: 159
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 48, 93

Conread position: 85-482
Cow position:
Alignm length: 425
Alignm identity: 285
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 72, 89

Conread position: 85-493
Cow position:
Alignm length: 432
Alignm identity: 297
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 20, 264

Conread position: 91-207
Cow position:
Alignm length: 121
Alignm identity: 101
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 22, 84

Conread position: 92-493
Cow position:
Alignm length: 422
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 86

Conread position: 97-284
Cow position:
Alignm length: 200
Alignm identity: 154
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 58, 180

Conread position: 97-399
Cow position:
Alignm length: 329
Alignm identity: 225
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 60, 12

Conread position: 99-468
Cow position:
Alignm length: 393
Alignm identity: 268
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 56, 74

Conread position: 100-418
Cow position:
Alignm length: 339
Alignm identity: 232
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 57, 75

Conread position: 100-493
Cow position:
Alignm length: 428
Alignm identity: 279
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 44, 75

Conread position: 107-491
Cow position:
Alignm length: 402
Alignm identity: 259
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 106, 49

Conread position: 108-416
Cow position:
Alignm length: 345
Alignm identity: 236
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 46, 39

Conread position: 109-256
Cow position:
Alignm length: 163
Alignm identity: 128
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 46, 65

Conread position: 109-268
Cow position:
Alignm length: 171
Alignm identity: 135
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 48, 65

Conread position: 109-436
Cow position:
Alignm length: 359
Alignm identity: 245
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 48, 65

Conread position: 109-455
Cow position:
Alignm length: 376
Alignm identity: 257
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 33, 68

Conread position: 109-493
Cow position:
Alignm length: 403
Alignm identity: 270
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 46, 38

Conread position: 110-206
Cow position:
Alignm length: 100
Alignm identity: 86
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 44, 64

Conread position: 110-260
Cow position:
Alignm length: 161
Alignm identity: 123
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 48, 65

Conread position: 110-493
Cow position:
Alignm length: 411
Alignm identity: 280
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 38, 65

Conread position: 112-217
Cow position:
Alignm length: 111
Alignm identity: 96
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 40, 62

Conread position: 112-225
Cow position:
Alignm length: 118
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 45, 35

Conread position: 112-478
Cow position:
Alignm length: 383
Alignm identity: 251
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 45, 29

Conread position: 116-363
Cow position:
Alignm length: 262
Alignm identity: 186
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 42, 59

Conread position: 116-493
Cow position:
Alignm length: 404
Alignm identity: 274
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 42, 58

Conread position: 120-268
Cow position:
Alignm length: 157
Alignm identity: 124
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 28, 55

Conread position: 122-497
Cow position:
Alignm length: 391
Alignm identity: 264
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 32, 52

Conread position: 123-461
Cow position:
Alignm length: 370
Alignm identity: 252
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 34, 51

Conread position: 126-491
Cow position:
Alignm length: 397
Alignm identity: 274
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 31, 48

Conread position: 128-310
Cow position:
Alignm length: 196
Alignm identity: 146
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 31, 42

Conread position: 134-263
Cow position:
Alignm length: 142
Alignm identity: 113
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 24, 40

Conread position: 138-491
Cow position:
Alignm length: 383
Alignm identity: 257
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 17, 36

Conread position: 141-255
Cow position:
Alignm length: 116
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 82, 30

Conread position: 142-484
Cow position:
Alignm length: 373
Alignm identity: 258
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 13, 33

Conread position: 151-491
Cow position:
Alignm length: 365
Alignm identity: 242
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 62, 20

Conread position: 154-493
Cow position:
Alignm length: 353
Alignm identity: 243
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 69, 17

Conread position: 158-489
Cow position:
Alignm length: 358
Alignm identity: 234
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 55, 10

Conread position: 262-426
Cow position:
Alignm length: 170
Alignm identity: 124
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 30, 78

Conread position: 262-457
Cow position:
Alignm length: 199
Alignm identity: 141
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 30, 60

Conread position: 262-458
Cow position:
Alignm length: 200
Alignm identity: 140
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 26, 61

Conread position: 262-460
Cow position:
Alignm length: 204
Alignm identity: 140
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 27, 83

Conread position: 262-481
Cow position:
Alignm length: 223
Alignm identity: 158
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 30, 83

Conread position: 262-491
Cow position:
Alignm length: 234
Alignm identity: 160
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 27, 54

Conread position: 262-491
Cow position:
Alignm length: 232
Alignm identity: 152
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 31, 65

Conread position: 262-492
Cow position:
Alignm length: 237
Alignm identity: 163
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 28, 69

Conread position: 262-493
Cow position:
Alignm length: 236
Alignm identity: 162
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 27, 71

Conread position: 262-493
Cow position:
Alignm length: 240
Alignm identity: 170
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 27, 111

Conread position: 262-493
Cow position:
Alignm length: 236
Alignm identity: 162
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 24, 54

Conread position: 264-477
Cow position:
Alignm length: 217
Alignm identity: 145
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 28, 75

Conread position: 264-479
Cow position:
Alignm length: 222
Alignm identity: 151
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 28, 41

Conread position: 264-488
Cow position:
Alignm length: 227
Alignm identity: 149
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 9, 56

Conread position: 272-493
Cow position:
Alignm length: 228
Alignm identity: 158
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 19, 63

Conread position: 336-493
Cow position:
Alignm length: 161
Alignm identity: 116
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 42, 49

Conread position: 343-491
Cow position:
Alignm length: 149
Alignm identity: 106
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.