Cow genome map

Conread name: rcbe16_h13.y1

Conread position: 1-237
Cow position: chr17:2274936-2275181 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 190
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 76, 21

Conread position: 1-249
Cow position: chr17:1493496-1493232 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 179

Conread position: 1-254
Cow position: chr17:27698032-27697773 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 183
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 79, 151

Conread position: 1-263
Cow position: chr17:5042022-5041740 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 212
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 70, 186

Conread position: 1-263
Cow position: chr17:20358539-20358812 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 208
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 76, 22

Conread position: 1-268
Cow position: chr17:3781695-3781986 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 219
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 28, 188

Conread position: 1-268
Cow position: chr17:6566139-6566409 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 80

Conread position: 1-268
Cow position: chr17:8690791-8690500 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 210
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 76, 44

Conread position: 1-268
Cow position: chr17:16117771-16117481 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 223
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 56, 83

Conread position: 1-268
Cow position: chr17:20129338-20129608 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 53

Conread position: 1-268
Cow position: chr17:26764677-26764958 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 174

Conread position: 1-268
Cow position: chr17:28539703-28539971 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 194
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 119, 80

Conread position: 1-268
Cow position: chr17:36265573-36265302 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 199
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 80, 176

Conread position: 1-270
Cow position: chr17:16869608-16869334 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 209
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 79, 42

Conread position: 1-279
Cow position: chr17:3386957-3387239 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 175

Conread position: 1-454
Cow position: chr17:18592097-18592587 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 334
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 44, 181

Conread position: 1-464
Cow position: chr17:5896252-5895779 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 316
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 83, 153

Conread position: 1-465
Cow position: chr17:41029612-41030093 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 179

Conread position: 1-486
Cow position: chr17:24553665-24554170 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 29

Conread position: 1-486
Cow position: chr17:32138737-32138248 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 175

Conread position: 1-491
Cow position: chr17:5898866-5898345 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 60

Conread position: 1-491
Cow position: chr17:18201437-18201940 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 171

Conread position: 1-491
Cow position: chr17:42419398-42419889 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 114

Conread position: 1-493
Cow position: chr17:12289759-12289227 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 182

Conread position: 1-494
Cow position: chr17:15103219-15102707 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 22

Conread position: 1-495
Cow position: chr17:14003489-14004009 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 178

Conread position: 1-497
Cow position: chr17:32989153-32989660 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 154

Conread position: 1-497
Cow position: chr17:32993953-32993440 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 154

Conread position: 2-263
Cow position: chr17:11056716-11056434 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 208
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 17, 34

Conread position: 2-465
Cow position: chr17:24077066-24077557 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 174

Conread position: 2-472
Cow position: chr17:34595599-34596101 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 348
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 22, 163

Conread position: 2-497
Cow position: chr17:21960017-21959498 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 149

Conread position: 3-256
Cow position: chr17:34317055-34316775 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 205
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 74, 184

Conread position: 3-268
Cow position: chr17:27305825-27306100 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 132

Conread position: 3-281
Cow position: chr17:4330303-4330587 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 204
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 72, 45

Conread position: 3-412
Cow position: chr17:12059430-12058990 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 306
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 99, 9

Conread position: 4-268
Cow position: chr17:27679581-27679296 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 175

Conread position: 4-493
Cow position: chr17:11618243-11618768 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 175

Conread position: 6-263
Cow position: chr17:9564975-9565246 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 169

Conread position: 7-493
Cow position: chr17:20993374-20992857 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 173

Conread position: 8-258
Cow position: chr17:2270435-2270688 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 193
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 72, 171

Conread position: 8-290
Cow position: chr17:25188950-25189242 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 213
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 69, 141

Conread position: 9-268
Cow position: chr17:17179707-17179971 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 202
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 5, 130

Conread position: 9-268
Cow position: chr17:22563863-22564123 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 201
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 19, 108

Conread position: 9-465
Cow position: chr17:21680436-21680935 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 170

Conread position: 9-485
Cow position: chr17:11382048-11381552 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 112

Conread position: 23-249
Cow position: chr17:1061376-1061136 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 183
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 82, 58

Conread position: 27-493
Cow position: chr17:34079412-34078927 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 152

Conread position: 32-257
Cow position: chr17:15187558-15187325 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 165
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 54, 44

Conread position: 35-440
Cow position: chr17:17121370-17121802 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 284
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 42, 143

Conread position: 37-279
Cow position: chr17:1295875-1295618 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 198
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 43, 142

Conread position: 37-457
Cow position: chr17:40312428-40312853 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 291
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 172, 37

Conread position: 39-260
Cow position: chr17:15664367-15664602 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 178
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 38, 140

Conread position: 41-477
Cow position: chr17:20889075-20889537 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 330
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 36, 111

Conread position: 43-491
Cow position: chr17:18109384-18108907 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 332
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 31, 26

Conread position: 45-268
Cow position: chr17:12216367-12216132 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 180
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 35, 52

Conread position: 48-268
Cow position: chr17:13244313-13244099 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 57, 33

Conread position: 67-258
Cow position: chr17:4612347-4612151 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 153
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 52, 9

Conread position: 75-256
Cow position: chr17:12054456-12054649 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 30, 101

Conread position: 75-433
Cow position: chr17:37163793-37163407 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 272
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 25, 104

Conread position: 82-262
Cow position: chr17:13124991-13124796 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 26, 49

Conread position: 85-268
Cow position: chr17:3471161-3471362 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 154
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 15, 95

Conread position: 85-471
Cow position: chr17:25796594-25796175 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 285
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 15, 89

Conread position: 89-252
Cow position: chr17:21031538-21031708 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 14, 87

Conread position: 100-493
Cow position: chr17:21004067-21003650 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 296
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 57, 74

Conread position: 101-268
Cow position: chr17:20839793-20839619 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 141
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 53, 63

Conread position: 101-486
Cow position: chr17:15340964-15340575 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 256
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 162, 47

Conread position: 109-486
Cow position: chr17:7697829-7698224 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 270
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 104, 64

Conread position: 110-279
Cow position: chr17:20055442-20055625 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 12, 69

Conread position: 110-432
Cow position: chr17:11172844-11172492 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 239
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 13, 67

Conread position: 110-493
Cow position: chr17:34948414-34948818 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 256
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 32, 66

Conread position: 111-316
Cow position: chr17:25141241-25141457 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 109, 20

Conread position: 113-252
Cow position: chr17:32472014-32471864 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 35, 43

Conread position: 115-268
Cow position: chr17:7132676-7132509 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 42, 59

Conread position: 116-493
Cow position: chr17:20157397-20157789 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 273
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 38, 56

Conread position: 118-256
Cow position: chr17:9778033-9778176 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 119
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 39, 56

Conread position: 118-455
Cow position: chr17:24004177-24004517 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 239
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 41, 13

Conread position: 118-493
Cow position: chr17:25128567-25128173 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 284
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 39, 56

Conread position: 120-263
Cow position: chr17:15354770-15354919 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 26, 52

Conread position: 121-231
Cow position: chr17:11832351-11832241 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 101, 50

Conread position: 121-268
Cow position: chr17:25078208-25078061 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 122
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 100, 50

Conread position: 127-436
Cow position: chr17:38646859-38647188 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 232
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 86, 28

Conread position: 129-268
Cow position: chr17:6624051-6624200 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 45

Conread position: 130-256
Cow position: chr17:20912692-20912821 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 25, 17

Conread position: 141-493
Cow position: chr17:25999921-26000300 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 261
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 16, 33

Conread position: 180-497
Cow position: chr17:24559145-24559478 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 224
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 40, 0

Conread position: 212-492
Cow position: chr17:40673272-40673553 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 183
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 47, 54

Conread position: 214-485
Cow position: chr17:30728410-30728679 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 185
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 46, 79

Conread position: 253-493
Cow position: chr17:1493205-1492965 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 167
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 38, 17

Conread position: 262-485
Cow position: chr17:24149137-24149360 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 155
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 30, 43

Conread position: 262-486
Cow position: chr17:26230904-26231133 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 155
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 28, 84

Conread position: 262-486
Cow position: chr17:40331720-40331941 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 152
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 33, 55

Conread position: 262-491
Cow position: chr17:1035644-1035415 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 153
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 77

Conread position: 262-491
Cow position: chr17:2810579-2810814 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 163
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 30, 79

Conread position: 262-491
Cow position: chr17:25342786-25342561 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 156
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 54

Conread position: 262-491
Cow position: chr17:36814313-36814544 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 155
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 54

Conread position: 262-493
Cow position: chr17:20884476-20884709 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 164
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 30, 49

Conread position: 262-496
Cow position: chr17:6329067-6329304 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 168
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 30, 78

Conread position: 262-497
Cow position: chr17:21806498-21806264 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 158
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 66

Conread position: 262-497
Cow position: chr17:25189241-25189475 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 169
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 30, 49

Conread position: 262-497
Cow position: chr17:30665225-30665457 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 166
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 28, 78

Conread position: 264-491
Cow position: chr17:14652825-14652597 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 159
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 28, 47

Conread position: 267-471
Cow position: chr17:26789378-26789581 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 147
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 25, 80

Conread position: 268-488
Cow position: chr17:5350165-5349945 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 150
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 8

Conread position: 290-493
Cow position: chr17:5013093-5012891 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 140
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 138, 47

Show alignments to all cow chromosomes.