Cow genome map

Conread name: rcbe16_h13.y1

Conread position: 1-211
Cow position: chr19:23393578-23393794 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 167
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 79, 177

Conread position: 1-237
Cow position: chr19:19499944-19499706 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 172

Conread position: 1-254
Cow position: chr19:47773296-47773044 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 173
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 153, 70

Conread position: 1-263
Cow position: chr19:7612238-7612505 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 22

Conread position: 1-263
Cow position: chr19:14572979-14573261 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 211
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 76, 27

Conread position: 1-263
Cow position: chr19:20699694-20699978 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 199
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 83, 183

Conread position: 1-268
Cow position: chr19:27104364-27104637 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 26

Conread position: 1-268
Cow position: chr19:30746010-30746293 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 202
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 88, 81

Conread position: 1-268
Cow position: chr19:48409125-48409400 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 210
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 76, 47

Conread position: 1-279
Cow position: chr19:3246426-3246151 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 214
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 79, 162

Conread position: 1-371
Cow position: chr19:39697681-39698074 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 176

Conread position: 1-432
Cow position: chr19:42240681-42240224 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 176

Conread position: 1-474
Cow position: chr19:24061906-24062390 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 19

Conread position: 1-477
Cow position: chr19:10754920-10755418 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 336
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 30, 177

Conread position: 1-481
Cow position: chr19:39751085-39751596 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 349
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 63, 121

Conread position: 1-491
Cow position: chr19:7637613-7637108 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 347
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 76, 11

Conread position: 1-491
Cow position: chr19:43431710-43431195 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 175

Conread position: 1-493
Cow position: chr19:16096946-16096424 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 180

Conread position: 1-493
Cow position: chr19:39056853-39057377 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 178

Conread position: 1-497
Cow position: chr19:8127925-8128441 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 177

Conread position: 2-215
Cow position: chr19:14929064-14928842 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 171
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 25, 180

Conread position: 2-245
Cow position: chr19:4448150-4448400 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 190
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 75, 36

Conread position: 2-268
Cow position: chr19:46159676-46159946 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 207
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 22, 104

Conread position: 2-414
Cow position: chr19:35380936-35380499 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 299
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 98, 126

Conread position: 2-480
Cow position: chr19:18786715-18786205 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 69

Conread position: 2-489
Cow position: chr19:15068384-15067878 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 177

Conread position: 2-489
Cow position: chr19:44839284-44838807 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 69

Conread position: 2-494
Cow position: chr19:20661808-20661278 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 180

Conread position: 3-205
Cow position: chr19:37333138-37333348 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 3-282
Cow position: chr19:8375689-8375403 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 45

Conread position: 3-491
Cow position: chr19:28014091-28014609 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 159

Conread position: 3-494
Cow position: chr19:6688395-6687868 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 176

Conread position: 7-491
Cow position: chr19:51267522-51268014 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 341
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 72, 40

Conread position: 8-262
Cow position: chr19:24936183-24935930 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 195
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 112, 57

Conread position: 8-453
Cow position: chr19:4195344-4195806 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 144

Conread position: 8-491
Cow position: chr19:1355228-1355733 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 171

Conread position: 9-259
Cow position: chr19:27347031-27346766 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 183
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 75, 130

Conread position: 9-268
Cow position: chr19:46181193-46180925 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 72

Conread position: 9-491
Cow position: chr19:32457259-32457771 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 169

Conread position: 20-256
Cow position: chr19:21114934-21115185 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 159

Conread position: 23-237
Cow position: chr19:37633722-37633501 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 166
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 54, 156

Conread position: 24-253
Cow position: chr19:8212211-8211961 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 186
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 56, 160

Conread position: 25-493
Cow position: chr19:386781-387266 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 79

Conread position: 26-471
Cow position: chr19:14592689-14593167 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 10

Conread position: 28-256
Cow position: chr19:34425220-34425461 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 184
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 83, 53

Conread position: 30-254
Cow position: chr19:1580943-1580708 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 177
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 47, 146

Conread position: 33-268
Cow position: chr19:44757976-44757724 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 197
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 44, 156

Conread position: 38-497
Cow position: chr19:25727233-25726744 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 332
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 39, 50

Conread position: 42-292
Cow position: chr19:6515910-6516170 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 196
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 35, 110

Conread position: 45-255
Cow position: chr19:38340319-38340103 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 129

Conread position: 50-220
Cow position: chr19:24144680-24144851 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 47, 60

Conread position: 56-252
Cow position: chr19:19490273-19490075 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 157
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 21, 98

Conread position: 56-435
Cow position: chr19:36461865-36461455 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 273
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 24, 124

Conread position: 63-296
Cow position: chr19:630615-630849 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 184
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 14, 117

Conread position: 85-257
Cow position: chr19:27180562-27180380 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 148
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 70, 89

Conread position: 85-268
Cow position: chr19:13129588-13129762 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 128, 49

Conread position: 86-279
Cow position: chr19:10964903-10964694 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 156
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 36, 50

Conread position: 86-322
Cow position: chr19:24192099-24192350 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 191
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 19, 88

Conread position: 91-263
Cow position: chr19:53645714-53645530 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 13, 59

Conread position: 91-497
Cow position: chr19:12036800-12036366 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 307
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 66, 8

Conread position: 99-497
Cow position: chr19:40051674-40051255 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 289
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 58, 67

Conread position: 100-491
Cow position: chr19:28451117-28451518 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 270
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 57, 74

Conread position: 109-268
Cow position: chr19:19561227-19561401 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 47, 65

Conread position: 109-311
Cow position: chr19:47558083-47558295 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 159
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 39, 66

Conread position: 109-480
Cow position: chr19:19430952-19431343 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 261
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 42, 67

Conread position: 109-486
Cow position: chr19:10080790-10081198 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 278
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 47, 65

Conread position: 110-491
Cow position: chr19:23084603-23084985 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 257
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 45, 8

Conread position: 116-269
Cow position: chr19:44125377-44125534 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 124
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 41, 19

Conread position: 116-484
Cow position: chr19:33468753-33469146 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 271
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 41, 7

Conread position: 118-268
Cow position: chr19:21065509-21065656 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 112, 54

Conread position: 118-279
Cow position: chr19:7492169-7492334 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 132
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 10, 57

Conread position: 118-279
Cow position: chr19:33823047-33823217 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 39, 56

Conread position: 118-487
Cow position: chr19:30886124-30886525 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 272
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 40, 29

Conread position: 118-493
Cow position: chr19:53372165-53371766 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 288
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 37, 9

Conread position: 119-419
Cow position: chr19:38638070-38637760 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 225
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 38, 55

Conread position: 121-211
Cow position: chr19:38601189-38601097 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 82
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 36, 53

Conread position: 121-263
Cow position: chr19:35076754-35076612 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 118
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 23, 51

Conread position: 122-493
Cow position: chr19:5913216-5912828 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 266
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 31, 54

Conread position: 130-486
Cow position: chr19:21378724-21378348 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 262
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 14, 45

Conread position: 131-364
Cow position: chr19:10286650-10286899 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 181
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 17, 45

Conread position: 169-464
Cow position: chr19:23784618-23784316 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 210
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 44, 132

Conread position: 176-477
Cow position: chr19:32506320-32506002 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 216
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 46, 199

Conread position: 233-491
Cow position: chr19:55247506-55247756 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 182
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 19, 87

Conread position: 260-464
Cow position: chr19:47986755-47986962 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 143
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 28, 68

Conread position: 260-493
Cow position: chr19:2221179-2220943 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 172
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 32, 68

Conread position: 260-493
Cow position: chr19:36845149-36845382 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 157
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 32, 83

Conread position: 262-480
Cow position: chr19:28924660-28924877 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 151
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 30, 54

Conread position: 262-489
Cow position: chr19:13121372-13121153 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 167
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 83, 30

Conread position: 262-491
Cow position: chr19:21816865-21817093 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 169
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 30, 58

Conread position: 262-493
Cow position: chr19:3621332-3621557 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 30, 43

Conread position: 262-493
Cow position: chr19:34166272-34166498 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 160
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 30, 14

Conread position: 266-493
Cow position: chr19:38410774-38411000 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 157
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 23, 56

Conread position: 342-493
Cow position: chr19:30227501-30227652 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.