Cow genome map

Conread name: rcbe16_h13.y1

Conread position: 1-220
Cow position:
Alignm length: 228
Alignm identity: 162
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 76, 127

Conread position: 1-249
Cow position:
Alignm length: 260
Alignm identity: 194
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 9, 85

Conread position: 1-254
Cow position:
Alignm length: 269
Alignm identity: 188
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 85, 185

Conread position: 1-254
Cow position:
Alignm length: 277
Alignm identity: 211
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 76, 181

Conread position: 1-254
Cow position:
Alignm length: 275
Alignm identity: 194
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 81, 55

Conread position: 1-255
Cow position:
Alignm length: 271
Alignm identity: 194
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 77, 22

Conread position: 1-255
Cow position:
Alignm length: 267
Alignm identity: 201
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 12, 122

Conread position: 1-255
Cow position:
Alignm length: 275
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 175

Conread position: 1-256
Cow position:
Alignm length: 263
Alignm identity: 198
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 100, 68

Conread position: 1-263
Cow position:
Alignm length: 268
Alignm identity: 189
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 76, 114

Conread position: 1-263
Cow position:
Alignm length: 273
Alignm identity: 189
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 65, 122

Conread position: 1-268
Cow position:
Alignm length: 302
Alignm identity: 224
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 75, 70

Conread position: 1-268
Cow position:
Alignm length: 279
Alignm identity: 191
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 75, 117

Conread position: 1-279
Cow position:
Alignm length: 291
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 156

Conread position: 1-283
Cow position:
Alignm length: 292
Alignm identity: 214
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 79, 70

Conread position: 1-435
Cow position:
Alignm length: 463
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 103

Conread position: 1-436
Cow position:
Alignm length: 471
Alignm identity: 306
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 76, 188

Conread position: 1-456
Cow position:
Alignm length: 470
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 54

Conread position: 1-461
Cow position:
Alignm length: 494
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 182

Conread position: 1-471
Cow position:
Alignm length: 506
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 177

Conread position: 1-476
Cow position:
Alignm length: 510
Alignm identity: 338
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 76, 152

Conread position: 1-486
Cow position:
Alignm length: 497
Alignm identity: 316
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 79, 173

Conread position: 1-487
Cow position:
Alignm length: 516
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 107

Conread position: 1-489
Cow position:
Alignm length: 506
Alignm identity: 326
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 76, 70

Conread position: 1-489
Cow position:
Alignm length: 530
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 151

Conread position: 1-491
Cow position:
Alignm length: 522
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 180

Conread position: 1-491
Cow position:
Alignm length: 533
Alignm identity: 355
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 76, 70

Conread position: 1-491
Cow position:
Alignm length: 513
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 21

Conread position: 1-493
Cow position:
Alignm length: 524
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 159

Conread position: 1-493
Cow position:
Alignm length: 532
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 61

Conread position: 2-263
Cow position:
Alignm length: 277
Alignm identity: 200
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 71, 94

Conread position: 2-268
Cow position:
Alignm length: 278
Alignm identity: 201
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 74, 39

Conread position: 2-461
Cow position:
Alignm length: 488
Alignm identity: 333
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 74, 150

Conread position: 2-489
Cow position:
Alignm length: 526
Alignm identity: 343
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 82, 181

Conread position: 3-423
Cow position:
Alignm length: 444
Alignm identity: 299
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 74, 51

Conread position: 3-461
Cow position:
Alignm length: 494
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 170

Conread position: 4-262
Cow position:
Alignm length: 275
Alignm identity: 203
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 103, 70

Conread position: 4-485
Cow position:
Alignm length: 515
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 149

Conread position: 4-497
Cow position:
Alignm length: 531
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 173

Conread position: 5-433
Cow position:
Alignm length: 463
Alignm identity: 316
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 71, 176

Conread position: 5-470
Cow position:
Alignm length: 504
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 175

Conread position: 7-416
Cow position:
Alignm length: 423
Alignm identity: 284
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 150, 7

Conread position: 8-211
Cow position:
Alignm length: 211
Alignm identity: 167
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 69, 132

Conread position: 8-233
Cow position:
Alignm length: 234
Alignm identity: 173
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 69, 63

Conread position: 8-275
Cow position:
Alignm length: 287
Alignm identity: 215
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 69, 142

Conread position: 8-315
Cow position:
Alignm length: 324
Alignm identity: 221
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 69, 107

Conread position: 8-433
Cow position:
Alignm length: 453
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 169

Conread position: 8-481
Cow position:
Alignm length: 488
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 141

Conread position: 8-485
Cow position:
Alignm length: 507
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 166

Conread position: 8-487
Cow position:
Alignm length: 514
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 112

Conread position: 8-491
Cow position:
Alignm length: 505
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 171

Conread position: 8-493
Cow position:
Alignm length: 504
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 145

Conread position: 9-222
Cow position:
Alignm length: 220
Alignm identity: 162
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 71, 0

Conread position: 9-237
Cow position:
Alignm length: 235
Alignm identity: 174
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 6, 144

Conread position: 9-264
Cow position:
Alignm length: 275
Alignm identity: 194
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 17, 67

Conread position: 9-271
Cow position:
Alignm length: 268
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 167

Conread position: 9-486
Cow position:
Alignm length: 513
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 167

Conread position: 25-268
Cow position:
Alignm length: 254
Alignm identity: 194
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 59, 151

Conread position: 31-268
Cow position:
Alignm length: 259
Alignm identity: 182
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 46, 144

Conread position: 37-255
Cow position:
Alignm length: 232
Alignm identity: 166
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 40, 80

Conread position: 40-477
Cow position:
Alignm length: 457
Alignm identity: 307
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 44, 74

Conread position: 41-485
Cow position:
Alignm length: 480
Alignm identity: 319
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 64, 40

Conread position: 43-268
Cow position:
Alignm length: 244
Alignm identity: 172
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 37, 68

Conread position: 50-493
Cow position:
Alignm length: 468
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 6

Conread position: 56-493
Cow position:
Alignm length: 471
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 80

Conread position: 71-491
Cow position:
Alignm length: 460
Alignm identity: 305
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 30, 106

Conread position: 75-268
Cow position:
Alignm length: 211
Alignm identity: 155
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 30, 102

Conread position: 83-256
Cow position:
Alignm length: 190
Alignm identity: 149
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 65, 92

Conread position: 85-405
Cow position:
Alignm length: 354
Alignm identity: 247
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 20, 65

Conread position: 85-461
Cow position:
Alignm length: 400
Alignm identity: 270
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 20, 92

Conread position: 85-465
Cow position:
Alignm length: 416
Alignm identity: 272
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 22, 89

Conread position: 85-492
Cow position:
Alignm length: 436
Alignm identity: 296
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 18, 92

Conread position: 92-270
Cow position:
Alignm length: 195
Alignm identity: 151
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 12, 81

Conread position: 92-481
Cow position:
Alignm length: 404
Alignm identity: 273
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 65, 82

Conread position: 100-233
Cow position:
Alignm length: 139
Alignm identity: 109
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 20, 73

Conread position: 100-493
Cow position:
Alignm length: 397
Alignm identity: 263
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 101, 71

Conread position: 108-263
Cow position:
Alignm length: 166
Alignm identity: 125
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 65

Conread position: 108-489
Cow position:
Alignm length: 414
Alignm identity: 279
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 49, 66

Conread position: 109-256
Cow position:
Alignm length: 152
Alignm identity: 115
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 48, 65

Conread position: 109-268
Cow position:
Alignm length: 167
Alignm identity: 135
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 48, 38

Conread position: 109-493
Cow position:
Alignm length: 411
Alignm identity: 267
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 44, 65

Conread position: 110-461
Cow position:
Alignm length: 364
Alignm identity: 232
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 46, 64

Conread position: 110-471
Cow position:
Alignm length: 393
Alignm identity: 264
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 38, 66

Conread position: 120-255
Cow position:
Alignm length: 144
Alignm identity: 113
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 37, 54

Conread position: 121-290
Cow position:
Alignm length: 172
Alignm identity: 129
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 113, 16

Conread position: 122-465
Cow position:
Alignm length: 372
Alignm identity: 249
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 100, 46

Conread position: 123-435
Cow position:
Alignm length: 344
Alignm identity: 232
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 25, 54

Conread position: 123-458
Cow position:
Alignm length: 356
Alignm identity: 236
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 32, 51

Conread position: 124-491
Cow position:
Alignm length: 404
Alignm identity: 276
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 34, 24

Conread position: 126-485
Cow position:
Alignm length: 383
Alignm identity: 252
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 31, 45

Conread position: 131-279
Cow position:
Alignm length: 159
Alignm identity: 122
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 27, 44

Conread position: 132-468
Cow position:
Alignm length: 348
Alignm identity: 232
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 25, 42

Conread position: 136-263
Cow position:
Alignm length: 135
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 21, 38

Conread position: 152-471
Cow position:
Alignm length: 342
Alignm identity: 234
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 69, 19

Conread position: 164-497
Cow position:
Alignm length: 363
Alignm identity: 251
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 49, 7

Conread position: 251-486
Cow position:
Alignm length: 237
Alignm identity: 158
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 39, 78

Conread position: 257-491
Cow position:
Alignm length: 238
Alignm identity: 165
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 35, 49

Conread position: 262-480
Cow position:
Alignm length: 224
Alignm identity: 150
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 30, 58

Conread position: 262-486
Cow position:
Alignm length: 228
Alignm identity: 161
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 26, 49

Conread position: 262-489
Cow position:
Alignm length: 234
Alignm identity: 158
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 29, 43

Conread position: 262-489
Cow position:
Alignm length: 233
Alignm identity: 162
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 30, 54

Conread position: 262-491
Cow position:
Alignm length: 234
Alignm identity: 166
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 24, 78

Conread position: 262-493
Cow position:
Alignm length: 237
Alignm identity: 157
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 76

Conread position: 262-493
Cow position:
Alignm length: 236
Alignm identity: 157
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 24, 78

Conread position: 322-493
Cow position:
Alignm length: 172
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 337-493
Cow position:
Alignm length: 157
Alignm identity: 110
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.