Cow genome map

Conread name: rcbe16_h13.y1

Conread position: 1-217
Cow position:
Alignm length: 226
Alignm identity: 167
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 76, 151

Conread position: 1-217
Cow position:
Alignm length: 221
Alignm identity: 156
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 78, 113

Conread position: 1-233
Cow position:
Alignm length: 238
Alignm identity: 180
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 79, 19

Conread position: 1-249
Cow position:
Alignm length: 267
Alignm identity: 202
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 60, 37

Conread position: 1-255
Cow position:
Alignm length: 271
Alignm identity: 206
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 21, 151

Conread position: 1-255
Cow position:
Alignm length: 272
Alignm identity: 202
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 76, 175

Conread position: 1-260
Cow position:
Alignm length: 280
Alignm identity: 206
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 76, 55

Conread position: 1-263
Cow position:
Alignm length: 279
Alignm identity: 199
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 76, 177

Conread position: 1-263
Cow position:
Alignm length: 286
Alignm identity: 200
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 79, 144

Conread position: 1-263
Cow position:
Alignm length: 276
Alignm identity: 207
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 76, 116

Conread position: 1-268
Cow position:
Alignm length: 293
Alignm identity: 208
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 83, 186

Conread position: 1-268
Cow position:
Alignm length: 294
Alignm identity: 207
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 83, 47

Conread position: 1-268
Cow position:
Alignm length: 293
Alignm identity: 218
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 75, 177

Conread position: 1-268
Cow position:
Alignm length: 285
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 152

Conread position: 1-268
Cow position:
Alignm length: 284
Alignm identity: 211
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 83, 151

Conread position: 1-271
Cow position:
Alignm length: 280
Alignm identity: 207
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 76, 96

Conread position: 1-279
Cow position:
Alignm length: 297
Alignm identity: 220
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 76, 157

Conread position: 1-281
Cow position:
Alignm length: 295
Alignm identity: 204
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 104, 150

Conread position: 1-341
Cow position:
Alignm length: 353
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 177

Conread position: 1-362
Cow position:
Alignm length: 373
Alignm identity: 238
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 18, 112

Conread position: 1-427
Cow position:
Alignm length: 457
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 182

Conread position: 1-461
Cow position:
Alignm length: 498
Alignm identity: 323
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 70, 176

Conread position: 1-474
Cow position:
Alignm length: 503
Alignm identity: 334
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 156, 44

Conread position: 1-475
Cow position:
Alignm length: 494
Alignm identity: 321
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 212, 80

Conread position: 1-475
Cow position:
Alignm length: 492
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 137

Conread position: 1-485
Cow position:
Alignm length: 512
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 175

Conread position: 1-486
Cow position:
Alignm length: 519
Alignm identity: 343
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 81, 40

Conread position: 1-488
Cow position:
Alignm length: 522
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 152

Conread position: 1-488
Cow position:
Alignm length: 499
Alignm identity: 329
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 83, 61

Conread position: 1-489
Cow position:
Alignm length: 529
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 189

Conread position: 1-491
Cow position:
Alignm length: 533
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 116

Conread position: 1-492
Cow position:
Alignm length: 524
Alignm identity: 341
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 156, 101

Conread position: 1-493
Cow position:
Alignm length: 527
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 156

Conread position: 1-493
Cow position:
Alignm length: 532
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 114

Conread position: 1-494
Cow position:
Alignm length: 521
Alignm identity: 335
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 79, 180

Conread position: 1-497
Cow position:
Alignm length: 532
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 150

Conread position: 2-217
Cow position:
Alignm length: 226
Alignm identity: 166
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 76, 118

Conread position: 2-217
Cow position:
Alignm length: 220
Alignm identity: 158
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 82, 69

Conread position: 2-257
Cow position:
Alignm length: 275
Alignm identity: 190
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 23, 137

Conread position: 2-279
Cow position:
Alignm length: 292
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 177

Conread position: 2-463
Cow position:
Alignm length: 493
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 177

Conread position: 3-436
Cow position:
Alignm length: 459
Alignm identity: 308
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 74, 181

Conread position: 4-249
Cow position:
Alignm length: 257
Alignm identity: 195
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 73, 175

Conread position: 4-282
Cow position:
Alignm length: 294
Alignm identity: 201
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 73, 177

Conread position: 4-491
Cow position:
Alignm length: 526
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 176

Conread position: 4-493
Cow position:
Alignm length: 511
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 174

Conread position: 5-436
Cow position:
Alignm length: 478
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 152

Conread position: 6-268
Cow position:
Alignm length: 279
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 173

Conread position: 7-268
Cow position:
Alignm length: 272
Alignm identity: 198
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 70, 129

Conread position: 7-485
Cow position:
Alignm length: 507
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 64

Conread position: 8-268
Cow position:
Alignm length: 276
Alignm identity: 205
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 69, 171

Conread position: 8-436
Cow position:
Alignm length: 461
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 170

Conread position: 8-463
Cow position:
Alignm length: 494
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 172

Conread position: 8-491
Cow position:
Alignm length: 520
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 171

Conread position: 9-493
Cow position:
Alignm length: 517
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 63

Conread position: 10-435
Cow position:
Alignm length: 459
Alignm identity: 314
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 67, 13

Conread position: 20-261
Cow position:
Alignm length: 259
Alignm identity: 189
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 53, 48

Conread position: 20-491
Cow position:
Alignm length: 502
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 96

Conread position: 23-256
Cow position:
Alignm length: 250
Alignm identity: 189
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 97, 151

Conread position: 24-465
Cow position:
Alignm length: 461
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 155

Conread position: 25-263
Cow position:
Alignm length: 259
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 154

Conread position: 27-279
Cow position:
Alignm length: 275
Alignm identity: 209
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 49, 125

Conread position: 31-217
Cow position:
Alignm length: 199
Alignm identity: 152
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 26, 147

Conread position: 41-476
Cow position:
Alignm length: 473
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 9

Conread position: 42-377
Cow position:
Alignm length: 350
Alignm identity: 235
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 35, 68

Conread position: 51-493
Cow position:
Alignm length: 461
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 126

Conread position: 53-493
Cow position:
Alignm length: 480
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 126

Conread position: 75-289
Cow position:
Alignm length: 232
Alignm identity: 168
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 30, 74

Conread position: 75-478
Cow position:
Alignm length: 430
Alignm identity: 283
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 25, 110

Conread position: 75-486
Cow position:
Alignm length: 438
Alignm identity: 297
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 30, 75

Conread position: 92-255
Cow position:
Alignm length: 168
Alignm identity: 136
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 14, 56

Conread position: 94-252
Cow position:
Alignm length: 168
Alignm identity: 129
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 64, 80

Conread position: 96-497
Cow position:
Alignm length: 425
Alignm identity: 279
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 61, 10

Conread position: 98-249
Cow position:
Alignm length: 155
Alignm identity: 115
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 65, 69

Conread position: 100-268
Cow position:
Alignm length: 179
Alignm identity: 140
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 7, 75

Conread position: 100-486
Cow position:
Alignm length: 412
Alignm identity: 277
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 64, 73

Conread position: 102-491
Cow position:
Alignm length: 414
Alignm identity: 276
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 55, 73

Conread position: 103-491
Cow position:
Alignm length: 409
Alignm identity: 273
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 11, 72

Conread position: 104-486
Cow position:
Alignm length: 415
Alignm identity: 278
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 5, 70

Conread position: 104-491
Cow position:
Alignm length: 413
Alignm identity: 283
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 53, 44

Conread position: 108-267
Cow position:
Alignm length: 171
Alignm identity: 130
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 49, 23

Conread position: 109-486
Cow position:
Alignm length: 405
Alignm identity: 269
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 40, 66

Conread position: 110-259
Cow position:
Alignm length: 153
Alignm identity: 129
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 47, 64

Conread position: 110-451
Cow position:
Alignm length: 367
Alignm identity: 240
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 112, 40

Conread position: 115-460
Cow position:
Alignm length: 380
Alignm identity: 256
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 42, 59

Conread position: 118-268
Cow position:
Alignm length: 162
Alignm identity: 124
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 39, 52

Conread position: 118-268
Cow position:
Alignm length: 159
Alignm identity: 123
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 36, 29

Conread position: 118-436
Cow position:
Alignm length: 351
Alignm identity: 247
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 39, 29

Conread position: 118-493
Cow position:
Alignm length: 401
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 56

Conread position: 120-464
Cow position:
Alignm length: 364
Alignm identity: 238
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 38, 54

Conread position: 124-308
Cow position:
Alignm length: 189
Alignm identity: 143
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 33, 50

Conread position: 125-489
Cow position:
Alignm length: 375
Alignm identity: 241
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 32, 46

Conread position: 128-256
Cow position:
Alignm length: 137
Alignm identity: 115
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 20, 47

Conread position: 130-461
Cow position:
Alignm length: 336
Alignm identity: 221
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 41

Conread position: 131-324
Cow position:
Alignm length: 208
Alignm identity: 150
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 24, 41

Conread position: 132-477
Cow position:
Alignm length: 355
Alignm identity: 239
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 25, 43

Conread position: 133-489
Cow position:
Alignm length: 370
Alignm identity: 245
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 26, 41

Conread position: 137-307
Cow position:
Alignm length: 183
Alignm identity: 133
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 20, 37

Conread position: 139-268
Cow position:
Alignm length: 135
Alignm identity: 106
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 18, 35

Conread position: 177-491
Cow position:
Alignm length: 336
Alignm identity: 224
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 35, 87

Conread position: 186-493
Cow position:
Alignm length: 321
Alignm identity: 216
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 71, 26

Conread position: 209-489
Cow position:
Alignm length: 302
Alignm identity: 200
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 45, 253

Conread position: 251-493
Cow position:
Alignm length: 248
Alignm identity: 173
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 38, 58

Conread position: 259-485
Cow position:
Alignm length: 236
Alignm identity: 168
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 33, 81

Conread position: 260-493
Cow position:
Alignm length: 237
Alignm identity: 160
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 55, 32

Conread position: 262-470
Cow position:
Alignm length: 212
Alignm identity: 145
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 30, 83

Conread position: 262-475
Cow position:
Alignm length: 220
Alignm identity: 147
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 30, 70

Conread position: 262-486
Cow position:
Alignm length: 230
Alignm identity: 161
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 28, 77

Conread position: 262-486
Cow position:
Alignm length: 226
Alignm identity: 149
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 204, 37

Conread position: 262-491
Cow position:
Alignm length: 237
Alignm identity: 164
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 30, 48

Conread position: 262-492
Cow position:
Alignm length: 235
Alignm identity: 161
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 28, 63

Conread position: 262-493
Cow position:
Alignm length: 236
Alignm identity: 159
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 27, 49

Conread position: 262-493
Cow position:
Alignm length: 235
Alignm identity: 159
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 28, 47

Conread position: 262-493
Cow position:
Alignm length: 236
Alignm identity: 166
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 30, 166

Conread position: 262-493
Cow position:
Alignm length: 238
Alignm identity: 170
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 30, 59

Conread position: 262-497
Cow position:
Alignm length: 241
Alignm identity: 162
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 54

Conread position: 263-486
Cow position:
Alignm length: 229
Alignm identity: 163
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 29, 66

Conread position: 263-497
Cow position:
Alignm length: 239
Alignm identity: 160
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 29, 42

Conread position: 264-493
Cow position:
Alignm length: 234
Alignm identity: 161
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 28, 52

Conread position: 265-493
Cow position:
Alignm length: 237
Alignm identity: 163
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 27, 14

Conread position: 267-497
Cow position:
Alignm length: 234
Alignm identity: 158
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 25, 72

Conread position: 316-491
Cow position:
Alignm length: 177
Alignm identity: 124
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 27, 0

Show alignments to all cow chromosomes.