Cow genome map

Conread name: rcbe16_h13.y1

Conread position: 1-205
Cow position: chr24:37037209-37037421 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 160
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 77, 179

Conread position: 1-220
Cow position: chr24:15472953-15473177 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 83, 175

Conread position: 1-237
Cow position: chr24:32405458-32405214 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 168
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 11, 181

Conread position: 1-256
Cow position: chr24:16625903-16625636 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 206
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 76, 39

Conread position: 1-256
Cow position: chr24:21264911-21264646 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 197
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 79, 156

Conread position: 1-256
Cow position: chr24:29606466-29606202 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 202
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 76, 29

Conread position: 1-258
Cow position: chr24:33238955-33238681 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 180

Conread position: 1-262
Cow position: chr24:6141361-6141089 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 191
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 79, 175

Conread position: 1-263
Cow position: chr24:11839775-11840050 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 176

Conread position: 1-263
Cow position: chr24:27720154-27719884 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 203
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 76, 148

Conread position: 1-263
Cow position: chr24:37205278-37205008 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 204
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 73, 30

Conread position: 1-268
Cow position: chr24:6154427-6154688 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 196
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 23, 56

Conread position: 1-268
Cow position: chr24:6341763-6342049 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 198
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 26, 46

Conread position: 1-268
Cow position: chr24:11006808-11007096 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 205
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 18, 180

Conread position: 1-268
Cow position: chr24:39219247-39218965 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 215
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 76, 17

Conread position: 1-281
Cow position: chr24:18374386-18374666 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 208
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 42, 82

Conread position: 1-434
Cow position: chr24:11886759-11887217 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 326
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 76, 37

Conread position: 1-436
Cow position: chr24:24250319-24250784 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 334
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 76, 186

Conread position: 1-436
Cow position: chr24:39238393-39238833 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 309
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 79, 178

Conread position: 1-475
Cow position: chr24:28496993-28496480 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 341
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 79, 270

Conread position: 1-478
Cow position: chr24:32205201-32204691 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 340
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 76, 181

Conread position: 1-484
Cow position: chr24:31309021-31309505 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 10

Conread position: 1-493
Cow position: chr24:27906023-27906557 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 186

Conread position: 2-215
Cow position: chr24:17955840-17955631 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 159
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 17, 108

Conread position: 2-461
Cow position: chr24:19658141-19658623 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 177

Conread position: 2-478
Cow position: chr24:30484338-30483837 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 107

Conread position: 3-268
Cow position: chr24:2730983-2730693 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 207
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 52, 186

Conread position: 5-267
Cow position: chr24:27270395-27270654 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 194
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 80, 172

Conread position: 8-256
Cow position: chr24:24002580-24002844 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 168

Conread position: 8-263
Cow position: chr24:19466331-19466058 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 208
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 69, 170

Conread position: 8-270
Cow position: chr24:36486462-36486180 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 210
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 72, 149

Conread position: 8-284
Cow position: chr24:35836632-35836341 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 209
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 74, 6

Conread position: 8-491
Cow position: chr24:39440955-39440451 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 171

Conread position: 9-260
Cow position: chr24:28353761-28354020 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 80

Conread position: 12-268
Cow position: chr24:44041400-44041135 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 92

Conread position: 16-304
Cow position: chr24:17309493-17309183 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 229
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 68, 213

Conread position: 24-217
Cow position: chr24:28233010-28233208 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 53, 11

Conread position: 25-256
Cow position: chr24:42102989-42103234 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 190
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 55, 117

Conread position: 26-258
Cow position: chr24:20024226-20024477 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 198
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 23, 154

Conread position: 26-320
Cow position: chr24:18405684-18405371 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 143

Conread position: 29-483
Cow position: chr24:28553923-28553457 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 335
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 51, 151

Conread position: 31-478
Cow position: chr24:23556703-23556230 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 328
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 46, 65

Conread position: 32-489
Cow position: chr24:14648701-14648244 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 317
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 48, 71

Conread position: 33-489
Cow position: chr24:20874307-20874792 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 334
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 47, 142

Conread position: 35-259
Cow position: chr24:38479335-38479103 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 173
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 42, 125

Conread position: 38-491
Cow position: chr24:25320624-25321099 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 138

Conread position: 41-491
Cow position: chr24:15288492-15288941 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 316
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 36, 141

Conread position: 53-268
Cow position: chr24:34532770-34533004 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 167
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 24, 126

Conread position: 56-268
Cow position: chr24:27267288-27267510 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 174
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 21, 73

Conread position: 75-471
Cow position: chr24:3663856-3664273 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 281
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 28, 104

Conread position: 84-268
Cow position: chr24:18970808-18970631 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 74, 29

Conread position: 84-268
Cow position: chr24:34315039-34315230 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 152
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 24, 68

Conread position: 85-425
Cow position: chr24:27341343-27340968 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 273
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 18, 92

Conread position: 85-491
Cow position: chr24:38347360-38347790 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 290
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 20, 93

Conread position: 87-497
Cow position: chr24:18734677-18734259 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 289
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 15, 95

Conread position: 91-262
Cow position: chr24:30177923-30178105 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 145
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 12, 86

Conread position: 91-493
Cow position: chr24:15861910-15861475 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 288
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 16, 30

Conread position: 92-263
Cow position: chr24:39123558-39123735 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 11, 80

Conread position: 93-493
Cow position: chr24:33944099-33944522 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 294
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 64, 83

Conread position: 98-261
Cow position: chr24:40974705-40974869 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 131
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 12, 23

Conread position: 99-268
Cow position: chr24:28600915-28600738 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 25, 80

Conread position: 103-269
Cow position: chr24:40849866-40850036 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 20, 11

Conread position: 108-268
Cow position: chr24:43432509-43432669 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 130
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 49, 39

Conread position: 110-441
Cow position: chr24:39807867-39808195 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 236
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 153, 50

Conread position: 110-493
Cow position: chr24:31816294-31816693 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 281
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 47, 64

Conread position: 112-476
Cow position: chr24:1269515-1269886 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 255
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 43, 62

Conread position: 118-256
Cow position: chr24:44702695-44702838 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 29, 55

Conread position: 118-290
Cow position: chr24:40445849-40446026 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 39, 57

Conread position: 122-254
Cow position: chr24:43832081-43832221 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 32, 25

Conread position: 123-465
Cow position: chr24:16268381-16268038 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 235
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 32, 24

Conread position: 124-493
Cow position: chr24:17294464-17294079 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 248
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 35, 50

Conread position: 125-485
Cow position: chr24:19769222-19769602 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 260
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 32, 49

Conread position: 127-268
Cow position: chr24:18390562-18390412 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 28, 46

Conread position: 129-257
Cow position: chr24:41980934-41980803 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 94, 42

Conread position: 262-464
Cow position: chr24:40130015-40130219 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 143
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 65

Conread position: 262-489
Cow position: chr24:44041123-44040891 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 158
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 27, 184

Conread position: 262-492
Cow position: chr24:27039935-27040165 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 159
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 30, 57

Conread position: 262-493
Cow position: chr24:28990452-28990678 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 161
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 25, 5

Conread position: 262-493
Cow position: chr24:29586883-29587117 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 163
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 70, 25

Conread position: 262-493
Cow position: chr24:39523559-39523334 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 160
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 69

Conread position: 264-485
Cow position: chr24:39159656-39159439 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 153
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 19, 53

Conread position: 266-493
Cow position: chr24:44987486-44987256 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 158
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 26, 0

Conread position: 277-493
Cow position: chr24:39911134-39910915 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 151
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 15, 46

Show alignments to all cow chromosomes.