Cow genome map

Conread name: rcbe16_h13.y1

Conread position: 1-249
Cow position: chr25:4488353-4488609 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 199
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 76, 103

Conread position: 1-256
Cow position: chr25:1735693-1735425 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 205
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 79, 119

Conread position: 1-256
Cow position: chr25:20403102-20402829 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 209
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 77, 151

Conread position: 1-263
Cow position: chr25:5514627-5514904 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 210
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 76, 12

Conread position: 1-263
Cow position: chr25:6891910-6891632 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 188

Conread position: 1-263
Cow position: chr25:26087132-26087414 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 215
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 11, 178

Conread position: 1-265
Cow position: chr25:20496157-20496431 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 200
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 76, 106

Conread position: 1-268
Cow position: chr25:12204086-12204368 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 179

Conread position: 1-279
Cow position: chr25:14791373-14791662 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 123

Conread position: 1-436
Cow position: chr25:11437185-11436723 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 178

Conread position: 1-484
Cow position: chr25:30319832-30319317 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 175

Conread position: 1-487
Cow position: chr25:17658232-17658746 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 151

Conread position: 1-489
Cow position: chr25:16064517-16065025 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 349
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 72, 24

Conread position: 1-493
Cow position: chr25:2414454-2414935 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 126

Conread position: 1-493
Cow position: chr25:16922176-16921655 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 12

Conread position: 1-494
Cow position: chr25:3145463-3145987 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 354
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 76, 175

Conread position: 2-220
Cow position: chr25:40388835-40388615 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 165
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 76, 39

Conread position: 2-268
Cow position: chr25:36779114-36779395 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 195
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 75, 153

Conread position: 3-403
Cow position: chr25:11666287-11666699 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 294
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 73, 20

Conread position: 7-492
Cow position: chr25:18448461-18448950 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 334
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 46, 110

Conread position: 8-465
Cow position: chr25:18564116-18564599 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 174

Conread position: 9-420
Cow position: chr25:20020343-20019935 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 288
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 68, 27

Conread position: 9-489
Cow position: chr25:18721471-18720985 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 330
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 96, 14

Conread position: 9-497
Cow position: chr25:1837868-1838385 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 166

Conread position: 23-247
Cow position: chr25:11051022-11051256 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 181
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 54, 130

Conread position: 23-485
Cow position: chr25:40321654-40321156 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 331
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 45, 130

Conread position: 25-263
Cow position: chr25:9055846-9056084 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 171
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 55, 89

Conread position: 25-491
Cow position: chr25:5847154-5846669 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 56

Conread position: 27-481
Cow position: chr25:26238512-26238992 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 326
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 57, 154

Conread position: 28-262
Cow position: chr25:9842649-9842896 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 196
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 52, 86

Conread position: 29-323
Cow position: chr25:10137751-10138065 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 238
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 16, 89

Conread position: 45-430
Cow position: chr25:23053216-23053635 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 287
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 22, 132

Conread position: 46-268
Cow position: chr25:6424918-6424685 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 170
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 31, 7

Conread position: 51-270
Cow position: chr25:15694650-15694882 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 173
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 26, 129

Conread position: 57-266
Cow position: chr25:9961493-9961276 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 168
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 23, 11

Conread position: 74-438
Cow position: chr25:12817065-12817451 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 262
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 30, 77

Conread position: 78-481
Cow position: chr25:6474403-6473958 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 311
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 29, 5

Conread position: 85-489
Cow position: chr25:16319423-16319003 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 289
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 60, 28

Conread position: 90-458
Cow position: chr25:12778822-12778435 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 267
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 15, 24

Conread position: 92-492
Cow position: chr25:12117265-12116861 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 269
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 102, 17

Conread position: 100-289
Cow position: chr25:10330673-10330480 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 113, 58

Conread position: 103-491
Cow position: chr25:12261170-12260750 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 291
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 54, 67

Conread position: 109-268
Cow position: chr25:17702233-17702073 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 40, 68

Conread position: 109-325
Cow position: chr25:35344766-35345005 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 172
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 12, 67

Conread position: 109-487
Cow position: chr25:9990361-9989972 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 266
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 14, 66

Conread position: 110-374
Cow position: chr25:18935144-18934875 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 195
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 38, 67

Conread position: 112-464
Cow position: chr25:21895150-21894773 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 254
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 101, 59

Conread position: 115-275
Cow position: chr25:17712270-17712437 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 132
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 42, 60

Conread position: 117-258
Cow position: chr25:40338654-40338795 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 39, 57

Conread position: 118-325
Cow position: chr25:24452429-24452201 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 172
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 41, 23

Conread position: 118-432
Cow position: chr25:37594153-37594486 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 239
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 39, 56

Conread position: 121-268
Cow position: chr25:16001779-16001626 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 123
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 27, 54

Conread position: 122-486
Cow position: chr25:15254588-15254214 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 249
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 36, 52

Conread position: 138-439
Cow position: chr25:15377092-15377413 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 227
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 19, 36

Conread position: 249-493
Cow position: chr25:433152-432907 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 164
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 43, 62

Conread position: 262-478
Cow position: chr25:9843086-9843304 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 151
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 30, 52

Conread position: 262-493
Cow position: chr25:18202015-18201788 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 25, 68

Conread position: 263-491
Cow position: chr25:30816797-30817028 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 163
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 29, 65

Conread position: 265-491
Cow position: chr25:12305189-12305415 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 155
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 24, 74

Conread position: 266-493
Cow position: chr25:17474599-17474372 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 158
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 26, 74

Conread position: 342-493
Cow position: chr25:31514171-31514322 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 344-491
Cow position: chr25:5807937-5808084 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.