Cow genome map
Conread name: | rcbe16_h13.y1 |
Conread position: | 1-249 |
Cow position: | chr25:4488353-4488609 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 199 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 76, 103 |
Conread position: | 1-256 |
Cow position: | chr25:1735693-1735425 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 205 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 79, 119 |
Conread position: | 1-256 |
Cow position: | chr25:20403102-20402829 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 209 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 77, 151 |
Conread position: | 1-263 |
Cow position: | chr25:5514627-5514904 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 210 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 76, 12 |
Conread position: | 1-263 |
Cow position: | chr25:6891910-6891632 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 222 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 188 |
Conread position: | 1-263 |
Cow position: | chr25:26087132-26087414 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 215 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 11, 178 |
Conread position: | 1-265 |
Cow position: | chr25:20496157-20496431 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 200 |
Alignm E-value: | 7e-34 |
Alignm gaps (pig, cow): | 76, 106 |
Conread position: | 1-268 |
Cow position: | chr25:12204086-12204368 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 227 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 179 |
Conread position: | 1-279 |
Cow position: | chr25:14791373-14791662 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 226 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 123 |
Conread position: | 1-436 |
Cow position: | chr25:11437185-11436723 (view UCSC Genome Browser custom track) |
Alignm length: | 466 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 178 |
Conread position: | 1-484 |
Cow position: | chr25:30319832-30319317 (view UCSC Genome Browser custom track) |
Alignm length: | 520 |
Alignm identity: | 364 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 175 |
Conread position: | 1-487 |
Cow position: | chr25:17658232-17658746 (view UCSC Genome Browser custom track) |
Alignm length: | 519 |
Alignm identity: | 368 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 79, 151 |
Conread position: | 1-489 |
Cow position: | chr25:16064517-16065025 (view UCSC Genome Browser custom track) |
Alignm length: | 520 |
Alignm identity: | 349 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 72, 24 |
Conread position: | 1-493 |
Cow position: | chr25:2414454-2414935 (view UCSC Genome Browser custom track) |
Alignm length: | 500 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 126 |
Conread position: | 1-493 |
Cow position: | chr25:16922176-16921655 (view UCSC Genome Browser custom track) |
Alignm length: | 533 |
Alignm identity: | 369 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 12 |
Conread position: | 1-494 |
Cow position: | chr25:3145463-3145987 (view UCSC Genome Browser custom track) |
Alignm length: | 533 |
Alignm identity: | 354 |
Alignm E-value: | 5.99756e-43 |
Alignm gaps (pig, cow): | 76, 175 |
Conread position: | 2-220 |
Cow position: | chr25:40388835-40388615 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 165 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 76, 39 |
Conread position: | 2-268 |
Cow position: | chr25:36779114-36779395 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 195 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 75, 153 |
Conread position: | 3-403 |
Cow position: | chr25:11666287-11666699 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 294 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 73, 20 |
Conread position: | 7-492 |
Cow position: | chr25:18448461-18448950 (view UCSC Genome Browser custom track) |
Alignm length: | 508 |
Alignm identity: | 334 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 46, 110 |
Conread position: | 8-465 |
Cow position: | chr25:18564116-18564599 (view UCSC Genome Browser custom track) |
Alignm length: | 490 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 174 |
Conread position: | 9-420 |
Cow position: | chr25:20020343-20019935 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 288 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 68, 27 |
Conread position: | 9-489 |
Cow position: | chr25:18721471-18720985 (view UCSC Genome Browser custom track) |
Alignm length: | 505 |
Alignm identity: | 330 |
Alignm E-value: | 7e-34 |
Alignm gaps (pig, cow): | 96, 14 |
Conread position: | 9-497 |
Cow position: | chr25:1837868-1838385 (view UCSC Genome Browser custom track) |
Alignm length: | 521 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 166 |
Conread position: | 23-247 |
Cow position: | chr25:11051022-11051256 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 181 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 54, 130 |
Conread position: | 23-485 |
Cow position: | chr25:40321654-40321156 (view UCSC Genome Browser custom track) |
Alignm length: | 503 |
Alignm identity: | 331 |
Alignm E-value: | 9e-36 |
Alignm gaps (pig, cow): | 45, 130 |
Conread position: | 25-263 |
Cow position: | chr25:9055846-9056084 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 171 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 55, 89 |
Conread position: | 25-491 |
Cow position: | chr25:5847154-5846669 (view UCSC Genome Browser custom track) |
Alignm length: | 497 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 131, 56 |
Conread position: | 27-481 |
Cow position: | chr25:26238512-26238992 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 326 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 57, 154 |
Conread position: | 28-262 |
Cow position: | chr25:9842649-9842896 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 196 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 52, 86 |
Conread position: | 29-323 |
Cow position: | chr25:10137751-10138065 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 238 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 16, 89 |
Conread position: | 45-430 |
Cow position: | chr25:23053216-23053635 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 287 |
Alignm E-value: | 7e-34 |
Alignm gaps (pig, cow): | 22, 132 |
Conread position: | 46-268 |
Cow position: | chr25:6424918-6424685 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 170 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 31, 7 |
Conread position: | 51-270 |
Cow position: | chr25:15694650-15694882 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 173 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 26, 129 |
Conread position: | 57-266 |
Cow position: | chr25:9961493-9961276 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 168 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 23, 11 |
Conread position: | 74-438 |
Cow position: | chr25:12817065-12817451 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 262 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 30, 77 |
Conread position: | 78-481 |
Cow position: | chr25:6474403-6473958 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 311 |
Alignm E-value: | 6.00036e-42 |
Alignm gaps (pig, cow): | 29, 5 |
Conread position: | 85-489 |
Cow position: | chr25:16319423-16319003 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 289 |
Alignm E-value: | 6.00036e-42 |
Alignm gaps (pig, cow): | 60, 28 |
Conread position: | 90-458 |
Cow position: | chr25:12778822-12778435 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 267 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 15, 24 |
Conread position: | 92-492 |
Cow position: | chr25:12117265-12116861 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 269 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 102, 17 |
Conread position: | 100-289 |
Cow position: | chr25:10330673-10330480 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 152 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 113, 58 |
Conread position: | 103-491 |
Cow position: | chr25:12261170-12260750 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 291 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 54, 67 |
Conread position: | 109-268 |
Cow position: | chr25:17702233-17702073 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 125 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 40, 68 |
Conread position: | 109-325 |
Cow position: | chr25:35344766-35345005 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 172 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 12, 67 |
Conread position: | 109-487 |
Cow position: | chr25:9990361-9989972 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 266 |
Alignm E-value: | 9e-36 |
Alignm gaps (pig, cow): | 14, 66 |
Conread position: | 110-374 |
Cow position: | chr25:18935144-18934875 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 195 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 38, 67 |
Conread position: | 112-464 |
Cow position: | chr25:21895150-21894773 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 254 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 101, 59 |
Conread position: | 115-275 |
Cow position: | chr25:17712270-17712437 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 132 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 42, 60 |
Conread position: | 117-258 |
Cow position: | chr25:40338654-40338795 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 113 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 39, 57 |
Conread position: | 118-325 |
Cow position: | chr25:24452429-24452201 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 172 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 41, 23 |
Conread position: | 118-432 |
Cow position: | chr25:37594153-37594486 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 239 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 39, 56 |
Conread position: | 121-268 |
Cow position: | chr25:16001779-16001626 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 123 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 27, 54 |
Conread position: | 122-486 |
Cow position: | chr25:15254588-15254214 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 249 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 36, 52 |
Conread position: | 138-439 |
Cow position: | chr25:15377092-15377413 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 227 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 19, 36 |
Conread position: | 249-493 |
Cow position: | chr25:433152-432907 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 164 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 43, 62 |
Conread position: | 262-478 |
Cow position: | chr25:9843086-9843304 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 151 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 30, 52 |
Conread position: | 262-493 |
Cow position: | chr25:18202015-18201788 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 162 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 25, 68 |
Conread position: | 263-491 |
Cow position: | chr25:30816797-30817028 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 163 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 29, 65 |
Conread position: | 265-491 |
Cow position: | chr25:12305189-12305415 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 155 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 24, 74 |
Conread position: | 266-493 |
Cow position: | chr25:17474599-17474372 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 158 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 26, 74 |
Conread position: | 342-493 |
Cow position: | chr25:31514171-31514322 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 111 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 344-491 |
Cow position: | chr25:5807937-5808084 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 107 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.