Cow genome map


           Conread name:
           rcbe16_h13.y1
        

               Conread position:
               1-249
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               199
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               76, 103
               

               Conread position:
               1-256
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               79, 119
               

               Conread position:
               1-256
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               209
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               77, 151
               

               Conread position:
               1-263
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               210
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               76, 12
               

               Conread position:
               1-263
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 188
               

               Conread position:
               1-263
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               215
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               11, 178
               

               Conread position:
               1-265
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               200
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               76, 106
               

               Conread position:
               1-268
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 179
               

               Conread position:
               1-279
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 123
               

               Conread position:
               1-436
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 178
               

               Conread position:
               1-484
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 175
               

               Conread position:
               1-487
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 151
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               349
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               72, 24
               

               Conread position:
               1-493
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 126
               

               Conread position:
               1-493
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 12
               

               Conread position:
               1-494
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               354
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               76, 175
               

               Conread position:
               2-220
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               76, 39
               

               Conread position:
               2-268
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               75, 153
               

               Conread position:
               3-403
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               294
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               73, 20
               

               Conread position:
               7-492
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               334
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               46, 110
               

               Conread position:
               8-465
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 174
               

               Conread position:
               9-420
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               288
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               68, 27
               

               Conread position:
               9-489
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               330
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               96, 14
               

               Conread position:
               9-497
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 166
               

               Conread position:
               23-247
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               54, 130
               

               Conread position:
               23-485
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               331
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               45, 130
               

               Conread position:
               25-263
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               55, 89
               

               Conread position:
               25-491
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 56
               

               Conread position:
               27-481
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               326
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               57, 154
               

               Conread position:
               28-262
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               196
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               52, 86
               

               Conread position:
               29-323
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               238
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               16, 89
               

               Conread position:
               45-430
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               287
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               22, 132
               

               Conread position:
               46-268
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               31, 7
               

               Conread position:
               51-270
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               26, 129
               

               Conread position:
               57-266
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               23, 11
               

               Conread position:
               74-438
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               262
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               30, 77
               

               Conread position:
               78-481
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               311
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               29, 5
               

               Conread position:
               85-489
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               289
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               60, 28
               

               Conread position:
               90-458
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               267
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               15, 24
               

               Conread position:
               92-492
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               269
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               102, 17
               

               Conread position:
               100-289
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               113, 58
               

               Conread position:
               103-491
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               291
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               54, 67
               

               Conread position:
               109-268
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               40, 68
               

               Conread position:
               109-325
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               12, 67
               

               Conread position:
               109-487
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               266
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               14, 66
               

               Conread position:
               110-374
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               195
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               38, 67
               

               Conread position:
               112-464
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               254
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               101, 59
               

               Conread position:
               115-275
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               42, 60
               

               Conread position:
               117-258
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               39, 57
               

               Conread position:
               118-325
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               41, 23
               

               Conread position:
               118-432
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               239
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               39, 56
               

               Conread position:
               121-268
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               27, 54
               

               Conread position:
               122-486
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               249
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               36, 52
               

               Conread position:
               138-439
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               227
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               19, 36
               

               Conread position:
               249-493
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               43, 62
               

               Conread position:
               262-478
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               30, 52
               

               Conread position:
               262-493
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               25, 68
               

               Conread position:
               263-491
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               29, 65
               

               Conread position:
               265-491
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               24, 74
               

               Conread position:
               266-493
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               26, 74
               

               Conread position:
               342-493
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               344-491
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.