Cow genome map
Conread name: | rcbe16_h13.y1 |
Conread position: | 1-207 |
Cow position: | chr29:42406285-42406492 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 158 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 76, 27 |
Conread position: | 1-219 |
Cow position: | chr29:24623861-24624092 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 179 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 76, 11 |
Conread position: | 1-225 |
Cow position: | chr29:25423443-25423674 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 183 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 76, 178 |
Conread position: | 1-249 |
Cow position: | chr29:4120471-4120724 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 198 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 76, 37 |
Conread position: | 1-249 |
Cow position: | chr29:43080990-43080735 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 170 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 76, 114 |
Conread position: | 1-252 |
Cow position: | chr29:21665593-21665854 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 198 |
Alignm E-value: | 6.00036e-42 |
Alignm gaps (pig, cow): | 75, 109 |
Conread position: | 1-254 |
Cow position: | chr29:29632319-29632047 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 203 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 79, 179 |
Conread position: | 1-254 |
Cow position: | chr29:45820629-45820376 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 186 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 79, 157 |
Conread position: | 1-255 |
Cow position: | chr29:19428291-19428545 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 193 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 79, 107 |
Conread position: | 1-256 |
Cow position: | chr29:28775830-28775575 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 91, 87 |
Conread position: | 1-263 |
Cow position: | chr29:9911780-9912066 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 204 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 83, 193 |
Conread position: | 1-263 |
Cow position: | chr29:12005147-12004874 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 202 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 32, 152 |
Conread position: | 1-263 |
Cow position: | chr29:24952305-24952582 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 210 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 83, 22 |
Conread position: | 1-263 |
Cow position: | chr29:31926673-31926395 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 215 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 179 |
Conread position: | 1-268 |
Cow position: | chr29:87395-87117 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 212 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 104, 80 |
Conread position: | 1-271 |
Cow position: | chr29:29066045-29066328 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 220 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 88 |
Conread position: | 1-279 |
Cow position: | chr29:28868249-28868545 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 220 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 72, 65 |
Conread position: | 1-400 |
Cow position: | chr29:6775367-6774949 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 295 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 106, 68 |
Conread position: | 1-461 |
Cow position: | chr29:39567304-39567790 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 153 |
Conread position: | 1-465 |
Cow position: | chr29:43495688-43496153 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 324 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 87, 69 |
Conread position: | 1-474 |
Cow position: | chr29:36216737-36217236 (view UCSC Genome Browser custom track) |
Alignm length: | 506 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 83, 150 |
Conread position: | 1-489 |
Cow position: | chr29:35291716-35292229 (view UCSC Genome Browser custom track) |
Alignm length: | 518 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 179 |
Conread position: | 1-491 |
Cow position: | chr29:1325056-1325575 (view UCSC Genome Browser custom track) |
Alignm length: | 531 |
Alignm identity: | 352 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 28, 154 |
Conread position: | 1-493 |
Cow position: | chr29:11398308-11397782 (view UCSC Genome Browser custom track) |
Alignm length: | 543 |
Alignm identity: | 359 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 76, 13 |
Conread position: | 1-493 |
Cow position: | chr29:32732952-32733434 (view UCSC Genome Browser custom track) |
Alignm length: | 502 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 80 |
Conread position: | 2-268 |
Cow position: | chr29:35281122-35281396 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 213 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 160 |
Conread position: | 2-493 |
Cow position: | chr29:36633215-36632721 (view UCSC Genome Browser custom track) |
Alignm length: | 505 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 90 |
Conread position: | 3-256 |
Cow position: | chr29:19792647-19792388 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 193 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 74, 109 |
Conread position: | 3-268 |
Cow position: | chr29:34746034-34745762 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 215 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 149 |
Conread position: | 3-491 |
Cow position: | chr29:36586199-36586706 (view UCSC Genome Browser custom track) |
Alignm length: | 514 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 137 |
Conread position: | 4-485 |
Cow position: | chr29:19124981-19125453 (view UCSC Genome Browser custom track) |
Alignm length: | 490 |
Alignm identity: | 325 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 152 |
Conread position: | 4-490 |
Cow position: | chr29:465778-465261 (view UCSC Genome Browser custom track) |
Alignm length: | 524 |
Alignm identity: | 364 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 356 |
Conread position: | 4-493 |
Cow position: | chr29:2744651-2744130 (view UCSC Genome Browser custom track) |
Alignm length: | 529 |
Alignm identity: | 365 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 176 |
Conread position: | 5-268 |
Cow position: | chr29:26285406-26285136 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 193 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 72, 117 |
Conread position: | 5-490 |
Cow position: | chr29:32800085-32799573 (view UCSC Genome Browser custom track) |
Alignm length: | 517 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 175 |
Conread position: | 8-215 |
Cow position: | chr29:26335752-26335539 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 158 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 69, 10 |
Conread position: | 8-484 |
Cow position: | chr29:2188723-2188223 (view UCSC Genome Browser custom track) |
Alignm length: | 513 |
Alignm identity: | 346 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 69, 10 |
Conread position: | 8-486 |
Cow position: | chr29:13639728-13639232 (view UCSC Genome Browser custom track) |
Alignm length: | 512 |
Alignm identity: | 340 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 68, 130 |
Conread position: | 8-497 |
Cow position: | chr29:1933935-1933426 (view UCSC Genome Browser custom track) |
Alignm length: | 515 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 174 |
Conread position: | 10-491 |
Cow position: | chr29:23874084-23874599 (view UCSC Genome Browser custom track) |
Alignm length: | 520 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 86 |
Conread position: | 12-478 |
Cow position: | chr29:15738715-15738214 (view UCSC Genome Browser custom track) |
Alignm length: | 504 |
Alignm identity: | 335 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 65, 159 |
Conread position: | 13-268 |
Cow position: | chr29:45650708-45650444 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 196 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 89, 56 |
Conread position: | 15-491 |
Cow position: | chr29:38581601-38582107 (view UCSC Genome Browser custom track) |
Alignm length: | 512 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 137 |
Conread position: | 27-263 |
Cow position: | chr29:12798576-12798813 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 178 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 50, 90 |
Conread position: | 30-461 |
Cow position: | chr29:6293817-6293371 (view UCSC Genome Browser custom track) |
Alignm length: | 453 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 119 |
Conread position: | 41-263 |
Cow position: | chr29:9686351-9686108 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 185 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 39, 146 |
Conread position: | 43-491 |
Cow position: | chr29:20626237-20626706 (view UCSC Genome Browser custom track) |
Alignm length: | 474 |
Alignm identity: | 315 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 30, 132 |
Conread position: | 45-268 |
Cow position: | chr29:36037374-36037601 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 171 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 32, 112 |
Conread position: | 85-256 |
Cow position: | chr29:22720835-22721018 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 143 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 70, 62 |
Conread position: | 91-254 |
Cow position: | chr29:3395823-3395992 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 139 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 66, 83 |
Conread position: | 92-489 |
Cow position: | chr29:39111594-39111181 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 290 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 64, 83 |
Conread position: | 96-493 |
Cow position: | chr29:40891985-40891565 (view UCSC Genome Browser custom track) |
Alignm length: | 434 |
Alignm identity: | 294 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 13, 79 |
Conread position: | 97-489 |
Cow position: | chr29:34360075-34359683 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 262 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 60, 77 |
Conread position: | 99-211 |
Cow position: | chr29:43516957-43516846 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 100 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 58, 10 |
Conread position: | 99-268 |
Cow position: | chr29:22162536-22162354 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 140 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 26, 82 |
Conread position: | 109-475 |
Cow position: | chr29:25333722-25333338 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 265 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 38, 64 |
Conread position: | 109-493 |
Cow position: | chr29:41530581-41530990 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 284 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 45, 39 |
Conread position: | 118-436 |
Cow position: | chr29:44236208-44236537 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 228 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 88, 53 |
Conread position: | 120-493 |
Cow position: | chr29:34297823-34297432 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 283 |
Alignm E-value: | 7.00649e-43 |
Alignm gaps (pig, cow): | 40, 51 |
Conread position: | 121-486 |
Cow position: | chr29:12784212-12783829 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 259 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 36, 53 |
Conread position: | 126-491 |
Cow position: | chr29:1556680-1557066 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 260 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 31, 48 |
Conread position: | 135-491 |
Cow position: | chr29:23578019-23577647 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 248 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 20, 39 |
Conread position: | 142-436 |
Cow position: | chr29:24578640-24578947 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 222 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 15, 130 |
Conread position: | 262-475 |
Cow position: | chr29:13372576-13372786 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 147 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 30, 69 |
Conread position: | 262-486 |
Cow position: | chr29:25474831-25475059 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 157 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 26, 60 |
Conread position: | 262-492 |
Cow position: | chr29:26017591-26017362 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 162 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 30, 64 |
Conread position: | 262-493 |
Cow position: | chr29:17297045-17297277 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 162 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 27, 78 |
Conread position: | 263-493 |
Cow position: | chr29:15947083-15947308 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 156 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 264-491 |
Cow position: | chr29:22068833-22068604 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 157 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 28, 173 |
Conread position: | 264-491 |
Cow position: | chr29:30440844-30441076 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 156 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 28, 81 |
Conread position: | 266-493 |
Cow position: | chr29:21443426-21443197 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 161 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 23, 75 |
Conread position: | 303-493 |
Cow position: | chr29:23825260-23825073 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 133 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 36, 165 |
Show alignments to all cow chromosomes.