Cow genome map

Conread name: rcbe16_h13.y1

Conread position: 1-207
Cow position: chr29:42406285-42406492 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 158
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 76, 27

Conread position: 1-219
Cow position: chr29:24623861-24624092 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 179
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 76, 11

Conread position: 1-225
Cow position: chr29:25423443-25423674 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 183
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 76, 178

Conread position: 1-249
Cow position: chr29:4120471-4120724 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 198
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 76, 37

Conread position: 1-249
Cow position: chr29:43080990-43080735 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 170
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 76, 114

Conread position: 1-252
Cow position: chr29:21665593-21665854 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 198
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 75, 109

Conread position: 1-254
Cow position: chr29:29632319-29632047 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 203
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 79, 179

Conread position: 1-254
Cow position: chr29:45820629-45820376 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 186
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 79, 157

Conread position: 1-255
Cow position: chr29:19428291-19428545 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 193
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 79, 107

Conread position: 1-256
Cow position: chr29:28775830-28775575 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 87

Conread position: 1-263
Cow position: chr29:9911780-9912066 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 204
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 83, 193

Conread position: 1-263
Cow position: chr29:12005147-12004874 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 202
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 32, 152

Conread position: 1-263
Cow position: chr29:24952305-24952582 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 210
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 83, 22

Conread position: 1-263
Cow position: chr29:31926673-31926395 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 179

Conread position: 1-268
Cow position: chr29:87395-87117 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 212
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 104, 80

Conread position: 1-271
Cow position: chr29:29066045-29066328 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 88

Conread position: 1-279
Cow position: chr29:28868249-28868545 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 220
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 72, 65

Conread position: 1-400
Cow position: chr29:6775367-6774949 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 295
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 106, 68

Conread position: 1-461
Cow position: chr29:39567304-39567790 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 153

Conread position: 1-465
Cow position: chr29:43495688-43496153 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 324
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 87, 69

Conread position: 1-474
Cow position: chr29:36216737-36217236 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 150

Conread position: 1-489
Cow position: chr29:35291716-35292229 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 179

Conread position: 1-491
Cow position: chr29:1325056-1325575 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 352
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 28, 154

Conread position: 1-493
Cow position: chr29:11398308-11397782 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 359
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 76, 13

Conread position: 1-493
Cow position: chr29:32732952-32733434 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 80

Conread position: 2-268
Cow position: chr29:35281122-35281396 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 160

Conread position: 2-493
Cow position: chr29:36633215-36632721 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 90

Conread position: 3-256
Cow position: chr29:19792647-19792388 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 193
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 74, 109

Conread position: 3-268
Cow position: chr29:34746034-34745762 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 149

Conread position: 3-491
Cow position: chr29:36586199-36586706 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 137

Conread position: 4-485
Cow position: chr29:19124981-19125453 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 152

Conread position: 4-490
Cow position: chr29:465778-465261 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 356

Conread position: 4-493
Cow position: chr29:2744651-2744130 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 176

Conread position: 5-268
Cow position: chr29:26285406-26285136 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 193
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 72, 117

Conread position: 5-490
Cow position: chr29:32800085-32799573 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 175

Conread position: 8-215
Cow position: chr29:26335752-26335539 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 158
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 69, 10

Conread position: 8-484
Cow position: chr29:2188723-2188223 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 346
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 69, 10

Conread position: 8-486
Cow position: chr29:13639728-13639232 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 340
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 68, 130

Conread position: 8-497
Cow position: chr29:1933935-1933426 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 174

Conread position: 10-491
Cow position: chr29:23874084-23874599 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 86

Conread position: 12-478
Cow position: chr29:15738715-15738214 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 335
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 65, 159

Conread position: 13-268
Cow position: chr29:45650708-45650444 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 196
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 89, 56

Conread position: 15-491
Cow position: chr29:38581601-38582107 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 137

Conread position: 27-263
Cow position: chr29:12798576-12798813 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 178
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 50, 90

Conread position: 30-461
Cow position: chr29:6293817-6293371 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 119

Conread position: 41-263
Cow position: chr29:9686351-9686108 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 185
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 39, 146

Conread position: 43-491
Cow position: chr29:20626237-20626706 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 315
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 30, 132

Conread position: 45-268
Cow position: chr29:36037374-36037601 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 171
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 32, 112

Conread position: 85-256
Cow position: chr29:22720835-22721018 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 143
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 70, 62

Conread position: 91-254
Cow position: chr29:3395823-3395992 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 139
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 66, 83

Conread position: 92-489
Cow position: chr29:39111594-39111181 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 290
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 64, 83

Conread position: 96-493
Cow position: chr29:40891985-40891565 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 294
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 13, 79

Conread position: 97-489
Cow position: chr29:34360075-34359683 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 262
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 60, 77

Conread position: 99-211
Cow position: chr29:43516957-43516846 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 100
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 58, 10

Conread position: 99-268
Cow position: chr29:22162536-22162354 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 26, 82

Conread position: 109-475
Cow position: chr29:25333722-25333338 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 265
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 38, 64

Conread position: 109-493
Cow position: chr29:41530581-41530990 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 284
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 45, 39

Conread position: 118-436
Cow position: chr29:44236208-44236537 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 228
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 88, 53

Conread position: 120-493
Cow position: chr29:34297823-34297432 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 283
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 40, 51

Conread position: 121-486
Cow position: chr29:12784212-12783829 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 259
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 36, 53

Conread position: 126-491
Cow position: chr29:1556680-1557066 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 260
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 31, 48

Conread position: 135-491
Cow position: chr29:23578019-23577647 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 248
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 20, 39

Conread position: 142-436
Cow position: chr29:24578640-24578947 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 222
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 15, 130

Conread position: 262-475
Cow position: chr29:13372576-13372786 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 147
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 30, 69

Conread position: 262-486
Cow position: chr29:25474831-25475059 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 157
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 26, 60

Conread position: 262-492
Cow position: chr29:26017591-26017362 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 30, 64

Conread position: 262-493
Cow position: chr29:17297045-17297277 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 27, 78

Conread position: 263-493
Cow position: chr29:15947083-15947308 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 156
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 264-491
Cow position: chr29:22068833-22068604 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 157
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 28, 173

Conread position: 264-491
Cow position: chr29:30440844-30441076 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 156
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 28, 81

Conread position: 266-493
Cow position: chr29:21443426-21443197 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 161
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 23, 75

Conread position: 303-493
Cow position: chr29:23825260-23825073 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 133
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 36, 165

Show alignments to all cow chromosomes.