Cow genome map
| Conread name: | rcbe16_h13.y1 |
| Conread position: | 1-211 |
| Cow position: | chr3:27285825-27286038 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 167 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 76, 104 |
| Conread position: | 1-217 |
| Cow position: | chr3:2334881-2335103 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 76, 128 |
| Conread position: | 1-217 |
| Cow position: | chr3:9843174-9843404 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 76, 157 |
| Conread position: | 1-217 |
| Cow position: | chr3:26219465-26219241 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 76, 177 |
| Conread position: | 1-220 |
| Cow position: | chr3:26920495-26920718 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 177 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 104, 80 |
| Conread position: | 1-262 |
| Cow position: | chr3:6853907-6853636 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 180 |
| Conread position: | 1-262 |
| Cow position: | chr3:49454828-49455109 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 208 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 76, 183 |
| Conread position: | 1-263 |
| Cow position: | chr3:36657177-36656897 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 182 |
| Conread position: | 1-268 |
| Cow position: | chr3:55460899-55460619 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 91, 68 |
| Conread position: | 1-268 |
| Cow position: | chr3:82460768-82461055 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 76, 190 |
| Conread position: | 1-275 |
| Cow position: | chr3:61171892-61171626 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 202 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 104, 48 |
| Conread position: | 1-280 |
| Cow position: | chr3:67044497-67044207 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 89, 80 |
| Conread position: | 1-364 |
| Cow position: | chr3:43528641-43528246 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 178 |
| Conread position: | 1-399 |
| Cow position: | chr3:76173066-76172644 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 291 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 76, 178 |
| Conread position: | 1-458 |
| Cow position: | chr3:24872355-24872788 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 302 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 264, 80 |
| Conread position: | 1-461 |
| Cow position: | chr3:48252491-48252972 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 177 |
| Conread position: | 1-465 |
| Cow position: | chr3:14626554-14626059 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 338 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 83, 176 |
| Conread position: | 1-468 |
| Cow position: | chr3:55272436-55271951 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 68 |
| Conread position: | 1-475 |
| Cow position: | chr3:50768271-50768781 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 336 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 76, 155 |
| Conread position: | 1-478 |
| Cow position: | chr3:48241218-48241719 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 17 |
| Conread position: | 1-481 |
| Cow position: | chr3:46900782-46901303 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 353 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 74, 160 |
| Conread position: | 1-485 |
| Cow position: | chr3:59001144-59000647 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 34 |
| Conread position: | 1-486 |
| Cow position: | chr3:16752651-16752147 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 87 |
| Conread position: | 1-486 |
| Cow position: | chr3:50762716-50763233 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 352 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 73, 93 |
| Conread position: | 1-489 |
| Cow position: | chr3:31225051-31225547 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 45 |
| Conread position: | 1-490 |
| Cow position: | chr3:59588115-59588629 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 179 |
| Conread position: | 1-491 |
| Cow position: | chr3:70566142-70565620 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 179 |
| Conread position: | 1-492 |
| Cow position: | chr3:23169474-23168950 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 178 |
| Conread position: | 1-492 |
| Cow position: | chr3:54340815-54340305 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 335 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 11, 41 |
| Conread position: | 1-493 |
| Cow position: | chr3:2506883-2506360 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 350 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 79, 139 |
| Conread position: | 1-493 |
| Cow position: | chr3:2674625-2675148 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 178 |
| Conread position: | 1-493 |
| Cow position: | chr3:37041036-37041537 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 83 |
| Conread position: | 1-497 |
| Cow position: | chr3:71231002-71231518 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 178 |
| Conread position: | 2-263 |
| Cow position: | chr3:68342658-68342382 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 78, 178 |
| Conread position: | 2-268 |
| Cow position: | chr3:30179681-30179958 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 178 |
| Conread position: | 2-471 |
| Cow position: | chr3:115818-116287 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 330 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 75, 138 |
| Conread position: | 2-480 |
| Cow position: | chr3:59648861-59649365 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 27 |
| Conread position: | 3-220 |
| Cow position: | chr3:6689593-6689816 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 77, 59 |
| Conread position: | 3-271 |
| Cow position: | chr3:48530236-48530518 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 127 |
| Conread position: | 4-267 |
| Cow position: | chr3:33698324-33698602 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 208 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 80, 101 |
| Conread position: | 4-268 |
| Cow position: | chr3:8148063-8147791 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 172 |
| Conread position: | 4-461 |
| Cow position: | chr3:49649980-49650475 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 147 |
| Conread position: | 4-486 |
| Cow position: | chr3:80581276-80581767 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 39 |
| Conread position: | 4-488 |
| Cow position: | chr3:53384684-53384167 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 175 |
| Conread position: | 7-489 |
| Cow position: | chr3:68586643-68587138 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 170 |
| Conread position: | 7-491 |
| Cow position: | chr3:68302930-68303432 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 172 |
| Conread position: | 8-256 |
| Cow position: | chr3:6402900-6403162 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 171 |
| Conread position: | 8-263 |
| Cow position: | chr3:51032948-51033219 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 205 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 70, 144 |
| Conread position: | 8-455 |
| Cow position: | chr3:51012935-51012472 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 177 |
| Conread position: | 8-464 |
| Cow position: | chr3:58766895-58767353 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 59 |
| Conread position: | 8-489 |
| Cow position: | chr3:7566811-7566301 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 57 |
| Conread position: | 8-492 |
| Cow position: | chr3:1830962-1830458 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 173 |
| Conread position: | 8-497 |
| Cow position: | chr3:72776843-72777361 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 171 |
| Conread position: | 9-268 |
| Cow position: | chr3:7678271-7678545 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 201 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 56, 174 |
| Conread position: | 10-269 |
| Cow position: | chr3:22872447-22872174 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 169 |
| Conread position: | 12-237 |
| Cow position: | chr3:8716854-8717084 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 65, 140 |
| Conread position: | 12-256 |
| Cow position: | chr3:44535153-44534901 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 68, 131 |
| Conread position: | 20-491 |
| Cow position: | chr3:11986946-11987442 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 155 |
| Conread position: | 23-432 |
| Cow position: | chr3:63177130-63177541 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 155 |
| Conread position: | 23-490 |
| Cow position: | chr3:53221646-53222125 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 331 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 186, 74 |
| Conread position: | 25-491 |
| Cow position: | chr3:7763289-7763772 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 20 |
| Conread position: | 25-493 |
| Cow position: | chr3:18066754-18067251 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 154 |
| Conread position: | 28-493 |
| Cow position: | chr3:59604495-59604958 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 21 |
| Conread position: | 32-255 |
| Cow position: | chr3:36672377-36672134 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 55, 148 |
| Conread position: | 32-474 |
| Cow position: | chr3:79292463-79292929 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 8 |
| Conread position: | 36-486 |
| Cow position: | chr3:59621973-59621536 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 296 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 41, 99 |
| Conread position: | 37-264 |
| Cow position: | chr3:58286265-58286024 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 20, 70 |
| Conread position: | 41-453 |
| Cow position: | chr3:58969252-58968824 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 284 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 46, 28 |
| Conread position: | 50-300 |
| Cow position: | chr3:13117992-13118271 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 27, 112 |
| Conread position: | 56-268 |
| Cow position: | chr3:17952307-17952533 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 21, 123 |
| Conread position: | 63-493 |
| Cow position: | chr3:209980-210438 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 117 |
| Conread position: | 75-279 |
| Cow position: | chr3:61857168-61857390 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 30, 102 |
| Conread position: | 76-268 |
| Cow position: | chr3:83920874-83921080 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 81, 98 |
| Conread position: | 77-211 |
| Cow position: | chr3:13350591-13350725 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 71, 38 |
| Conread position: | 85-262 |
| Cow position: | chr3:48900820-48900630 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 20, 92 |
| Conread position: | 85-460 |
| Cow position: | chr3:59101517-59101913 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 285 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 15, 92 |
| Conread position: | 85-497 |
| Cow position: | chr3:54903255-54903687 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 285 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 20, 59 |
| Conread position: | 91-377 |
| Cow position: | chr3:65800287-65800595 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 73, 12 |
| Conread position: | 98-491 |
| Cow position: | chr3:18854792-18855192 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 272 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 59, 11 |
| Conread position: | 99-491 |
| Cow position: | chr3:30463467-30463061 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 300 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 58, 75 |
| Conread position: | 100-256 |
| Cow position: | chr3:18763594-18763759 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 57, 76 |
| Conread position: | 100-378 |
| Cow position: | chr3:23417165-23416884 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 23, 56 |
| Conread position: | 102-262 |
| Cow position: | chr3:11019820-11019992 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 59, 69 |
| Conread position: | 104-268 |
| Cow position: | chr3:12286939-12287112 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 53, 70 |
| Conread position: | 104-486 |
| Cow position: | chr3:52863477-52863071 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 285 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 53, 11 |
| Conread position: | 106-362 |
| Cow position: | chr3:19198387-19198660 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 51, 68 |
| Conread position: | 108-326 |
| Cow position: | chr3:70468095-70467871 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 185 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 49, 39 |
| Conread position: | 109-247 |
| Cow position: | chr3:44623188-44623045 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 38, 64 |
| Conread position: | 109-269 |
| Cow position: | chr3:66901033-66900863 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 48, 65 |
| Conread position: | 109-493 |
| Cow position: | chr3:31309645-31309235 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 293 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 48, 16 |
| Conread position: | 112-268 |
| Cow position: | chr3:38691692-38691530 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 35, 8 |
| Conread position: | 112-457 |
| Cow position: | chr3:73764481-73764117 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 256 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 100, 59 |
| Conread position: | 112-493 |
| Cow position: | chr3:55124566-55124165 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 285 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 45, 62 |
| Conread position: | 115-268 |
| Cow position: | chr3:8393061-8393228 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 42, 59 |
| Conread position: | 116-279 |
| Cow position: | chr3:68583286-68583115 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 41, 31 |
| Conread position: | 116-428 |
| Cow position: | chr3:29507312-29507636 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 216 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 41, 60 |
| Conread position: | 116-493 |
| Cow position: | chr3:18497741-18498134 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 265 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 100, 55 |
| Conread position: | 118-248 |
| Cow position: | chr3:78894596-78894469 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 39, 56 |
| Conread position: | 118-253 |
| Cow position: | chr3:63179586-63179723 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 39, 56 |
| Conread position: | 118-490 |
| Cow position: | chr3:23471750-23471342 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 278 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 39, 56 |
| Conread position: | 119-263 |
| Cow position: | chr3:22170908-22171058 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 37, 58 |
| Conread position: | 120-263 |
| Cow position: | chr3:75158085-75158231 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 37, 55 |
| Conread position: | 121-256 |
| Cow position: | chr3:42588070-42588216 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 36, 53 |
| Conread position: | 121-268 |
| Cow position: | chr3:42483621-42483778 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 36, 53 |
| Conread position: | 124-266 |
| Cow position: | chr3:23944821-23944975 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 33, 50 |
| Conread position: | 129-268 |
| Cow position: | chr3:84000341-84000490 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 28, 45 |
| Conread position: | 129-486 |
| Cow position: | chr3:16255072-16254731 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 242 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 20, 46 |
| Conread position: | 135-493 |
| Cow position: | chr3:73394851-73395233 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 265 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 23, 39 |
| Conread position: | 141-493 |
| Cow position: | chr3:52607927-52608297 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 252 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 72, 30 |
| Conread position: | 153-491 |
| Cow position: | chr3:52652318-52651966 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 51, 18 |
| Conread position: | 160-465 |
| Cow position: | chr3:27940365-27940052 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 214 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 53, 11 |
| Conread position: | 178-491 |
| Cow position: | chr3:45211075-45211418 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 35, 150 |
| Conread position: | 258-492 |
| Cow position: | chr3:15443845-15443611 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 34, 82 |
| Conread position: | 260-493 |
| Cow position: | chr3:3656400-3656634 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 32, 79 |
| Conread position: | 262-461 |
| Cow position: | chr3:5365566-5365764 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 26, 57 |
| Conread position: | 262-471 |
| Cow position: | chr3:72504010-72503799 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 30, 58 |
| Conread position: | 262-485 |
| Cow position: | chr3:55712320-55712551 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 262-489 |
| Cow position: | chr3:23920540-23920314 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 30, 57 |
| Conread position: | 262-489 |
| Cow position: | chr3:49790921-49790695 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 41, 21 |
| Conread position: | 262-490 |
| Cow position: | chr3:5366659-5366884 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 30, 47 |
| Conread position: | 262-491 |
| Cow position: | chr3:35056090-35055862 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 30, 54 |
| Conread position: | 262-493 |
| Cow position: | chr3:2025075-2025319 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 262-493 |
| Cow position: | chr3:21015072-21014837 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 27, 71 |
| Conread position: | 262-493 |
| Cow position: | chr3:53270718-53270949 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 30, 77 |
| Conread position: | 262-493 |
| Cow position: | chr3:70334806-70334576 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 29, 66 |
| Conread position: | 262-494 |
| Cow position: | chr3:1517624-1517392 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 26, 58 |
| Conread position: | 263-487 |
| Cow position: | chr3:22509916-22510136 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 29, 57 |
| Conread position: | 264-490 |
| Cow position: | chr3:32787350-32787576 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 28, 41 |
| Conread position: | 268-471 |
| Cow position: | chr3:56059702-56059908 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 24, 37 |
| Conread position: | 270-493 |
| Cow position: | chr3:75238354-75238576 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 20, 51 |
| Conread position: | 287-493 |
| Cow position: | chr3:23203319-23203113 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 56, 37 |
| Conread position: | 289-493 |
| Cow position: | chr3:11640646-11640852 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 291-489 |
| Cow position: | chr3:27976606-27976410 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 342-493 |
| Cow position: | chr3:3556513-3556664 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 342-493 |
| Cow position: | chr3:6728362-6728211 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.