Cow genome map

Conread name: rcbe16_h13.y1

Conread position: 1-211
Cow position:
Alignm length: 216
Alignm identity: 167
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 76, 104

Conread position: 1-217
Cow position:
Alignm length: 226
Alignm identity: 168
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 76, 128

Conread position: 1-217
Cow position:
Alignm length: 233
Alignm identity: 175
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 76, 157

Conread position: 1-217
Cow position:
Alignm length: 226
Alignm identity: 171
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 76, 177

Conread position: 1-220
Cow position:
Alignm length: 227
Alignm identity: 177
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 104, 80

Conread position: 1-262
Cow position:
Alignm length: 273
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 180

Conread position: 1-262
Cow position:
Alignm length: 283
Alignm identity: 208
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 76, 183

Conread position: 1-263
Cow position:
Alignm length: 282
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 182

Conread position: 1-268
Cow position:
Alignm length: 288
Alignm identity: 196
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 91, 68

Conread position: 1-268
Cow position:
Alignm length: 292
Alignm identity: 215
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 76, 190

Conread position: 1-275
Cow position:
Alignm length: 285
Alignm identity: 202
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 104, 48

Conread position: 1-280
Cow position:
Alignm length: 295
Alignm identity: 202
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 89, 80

Conread position: 1-364
Cow position:
Alignm length: 400
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 178

Conread position: 1-399
Cow position:
Alignm length: 428
Alignm identity: 291
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 76, 178

Conread position: 1-458
Cow position:
Alignm length: 463
Alignm identity: 302
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 264, 80

Conread position: 1-461
Cow position:
Alignm length: 489
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 177

Conread position: 1-465
Cow position:
Alignm length: 501
Alignm identity: 338
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 83, 176

Conread position: 1-468
Cow position:
Alignm length: 501
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 68

Conread position: 1-475
Cow position:
Alignm length: 513
Alignm identity: 336
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 76, 155

Conread position: 1-478
Cow position:
Alignm length: 511
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 17

Conread position: 1-481
Cow position:
Alignm length: 534
Alignm identity: 353
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 74, 160

Conread position: 1-485
Cow position:
Alignm length: 515
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 34

Conread position: 1-486
Cow position:
Alignm length: 512
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 87

Conread position: 1-486
Cow position:
Alignm length: 523
Alignm identity: 352
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 73, 93

Conread position: 1-489
Cow position:
Alignm length: 511
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 45

Conread position: 1-490
Cow position:
Alignm length: 521
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 179

Conread position: 1-491
Cow position:
Alignm length: 527
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 179

Conread position: 1-492
Cow position:
Alignm length: 532
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 178

Conread position: 1-492
Cow position:
Alignm length: 522
Alignm identity: 335
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 11, 41

Conread position: 1-493
Cow position:
Alignm length: 528
Alignm identity: 350
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 79, 139

Conread position: 1-493
Cow position:
Alignm length: 531
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 178

Conread position: 1-493
Cow position:
Alignm length: 511
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 83

Conread position: 1-497
Cow position:
Alignm length: 527
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 178

Conread position: 2-263
Cow position:
Alignm length: 279
Alignm identity: 197
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 78, 178

Conread position: 2-268
Cow position:
Alignm length: 279
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 178

Conread position: 2-471
Cow position:
Alignm length: 491
Alignm identity: 330
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 75, 138

Conread position: 2-480
Cow position:
Alignm length: 508
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 27

Conread position: 3-220
Cow position:
Alignm length: 226
Alignm identity: 165
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 77, 59

Conread position: 3-271
Cow position:
Alignm length: 285
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 127

Conread position: 4-267
Cow position:
Alignm length: 281
Alignm identity: 208
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 80, 101

Conread position: 4-268
Cow position:
Alignm length: 274
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 172

Conread position: 4-461
Cow position:
Alignm length: 503
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 147

Conread position: 4-486
Cow position:
Alignm length: 504
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 39

Conread position: 4-488
Cow position:
Alignm length: 521
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 175

Conread position: 7-489
Cow position:
Alignm length: 500
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 170

Conread position: 7-491
Cow position:
Alignm length: 509
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 172

Conread position: 8-256
Cow position:
Alignm length: 264
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 171

Conread position: 8-263
Cow position:
Alignm length: 274
Alignm identity: 205
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 70, 144

Conread position: 8-455
Cow position:
Alignm length: 470
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 177

Conread position: 8-464
Cow position:
Alignm length: 472
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 59

Conread position: 8-489
Cow position:
Alignm length: 515
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 57

Conread position: 8-492
Cow position:
Alignm length: 513
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 173

Conread position: 8-497
Cow position:
Alignm length: 520
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 171

Conread position: 9-268
Cow position:
Alignm length: 277
Alignm identity: 201
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 56, 174

Conread position: 10-269
Cow position:
Alignm length: 276
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 169

Conread position: 12-237
Cow position:
Alignm length: 234
Alignm identity: 173
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 65, 140

Conread position: 12-256
Cow position:
Alignm length: 259
Alignm identity: 179
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 68, 131

Conread position: 20-491
Cow position:
Alignm length: 507
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 155

Conread position: 23-432
Cow position:
Alignm length: 421
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 155

Conread position: 23-490
Cow position:
Alignm length: 496
Alignm identity: 331
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 186, 74

Conread position: 25-491
Cow position:
Alignm length: 493
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 20

Conread position: 25-493
Cow position:
Alignm length: 509
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 154

Conread position: 28-493
Cow position:
Alignm length: 476
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 21

Conread position: 32-255
Cow position:
Alignm length: 245
Alignm identity: 184
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 55, 148

Conread position: 32-474
Cow position:
Alignm length: 474
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 8

Conread position: 36-486
Cow position:
Alignm length: 458
Alignm identity: 296
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 41, 99

Conread position: 37-264
Cow position:
Alignm length: 244
Alignm identity: 180
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 20, 70

Conread position: 41-453
Cow position:
Alignm length: 437
Alignm identity: 284
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 46, 28

Conread position: 50-300
Cow position:
Alignm length: 282
Alignm identity: 203
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 27, 112

Conread position: 56-268
Cow position:
Alignm length: 228
Alignm identity: 173
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 21, 123

Conread position: 63-493
Cow position:
Alignm length: 461
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 117

Conread position: 75-279
Cow position:
Alignm length: 225
Alignm identity: 171
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 30, 102

Conread position: 76-268
Cow position:
Alignm length: 208
Alignm identity: 160
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 81, 98

Conread position: 77-211
Cow position:
Alignm length: 139
Alignm identity: 111
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 71, 38

Conread position: 85-262
Cow position:
Alignm length: 193
Alignm identity: 154
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 20, 92

Conread position: 85-460
Cow position:
Alignm length: 405
Alignm identity: 285
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 15, 92

Conread position: 85-497
Cow position:
Alignm length: 439
Alignm identity: 285
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 20, 59

Conread position: 91-377
Cow position:
Alignm length: 312
Alignm identity: 216
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 73, 12

Conread position: 98-491
Cow position:
Alignm length: 411
Alignm identity: 272
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 59, 11

Conread position: 99-491
Cow position:
Alignm length: 422
Alignm identity: 300
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 58, 75

Conread position: 100-256
Cow position:
Alignm length: 167
Alignm identity: 126
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 57, 76

Conread position: 100-378
Cow position:
Alignm length: 290
Alignm identity: 197
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 23, 56

Conread position: 102-262
Cow position:
Alignm length: 176
Alignm identity: 137
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 59, 69

Conread position: 104-268
Cow position:
Alignm length: 177
Alignm identity: 133
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 53, 70

Conread position: 104-486
Cow position:
Alignm length: 413
Alignm identity: 285
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 53, 11

Conread position: 106-362
Cow position:
Alignm length: 279
Alignm identity: 196
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 51, 68

Conread position: 108-326
Cow position:
Alignm length: 230
Alignm identity: 185
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 49, 39

Conread position: 109-247
Cow position:
Alignm length: 146
Alignm identity: 113
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 38, 64

Conread position: 109-269
Cow position:
Alignm length: 172
Alignm identity: 129
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 48, 65

Conread position: 109-493
Cow position:
Alignm length: 416
Alignm identity: 293
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 48, 16

Conread position: 112-268
Cow position:
Alignm length: 166
Alignm identity: 129
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 35, 8

Conread position: 112-457
Cow position:
Alignm length: 375
Alignm identity: 256
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 100, 59

Conread position: 112-493
Cow position:
Alignm length: 409
Alignm identity: 285
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 45, 62

Conread position: 115-268
Cow position:
Alignm length: 169
Alignm identity: 129
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 42, 59

Conread position: 116-279
Cow position:
Alignm length: 175
Alignm identity: 135
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 41, 31

Conread position: 116-428
Cow position:
Alignm length: 328
Alignm identity: 216
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 41, 60

Conread position: 116-493
Cow position:
Alignm length: 399
Alignm identity: 265
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 100, 55

Conread position: 118-248
Cow position:
Alignm length: 134
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 39, 56

Conread position: 118-253
Cow position:
Alignm length: 140
Alignm identity: 110
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 39, 56

Conread position: 118-490
Cow position:
Alignm length: 410
Alignm identity: 278
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 39, 56

Conread position: 119-263
Cow position:
Alignm length: 153
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 37, 58

Conread position: 120-263
Cow position:
Alignm length: 149
Alignm identity: 115
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 37, 55

Conread position: 121-256
Cow position:
Alignm length: 148
Alignm identity: 120
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 36, 53

Conread position: 121-268
Cow position:
Alignm length: 160
Alignm identity: 126
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 36, 53

Conread position: 124-266
Cow position:
Alignm length: 156
Alignm identity: 121
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 33, 50

Conread position: 129-268
Cow position:
Alignm length: 151
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 45

Conread position: 129-486
Cow position:
Alignm length: 367
Alignm identity: 242
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 20, 46

Conread position: 135-493
Cow position:
Alignm length: 395
Alignm identity: 265
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 23, 39

Conread position: 141-493
Cow position:
Alignm length: 379
Alignm identity: 252
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 72, 30

Conread position: 153-491
Cow position:
Alignm length: 362
Alignm identity: 238
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 51, 18

Conread position: 160-465
Cow position:
Alignm length: 322
Alignm identity: 214
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 53, 11

Conread position: 178-491
Cow position:
Alignm length: 345
Alignm identity: 227
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 35, 150

Conread position: 258-492
Cow position:
Alignm length: 239
Alignm identity: 171
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 34, 82

Conread position: 260-493
Cow position:
Alignm length: 238
Alignm identity: 166
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 32, 79

Conread position: 262-461
Cow position:
Alignm length: 203
Alignm identity: 142
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 26, 57

Conread position: 262-471
Cow position:
Alignm length: 214
Alignm identity: 148
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 30, 58

Conread position: 262-485
Cow position:
Alignm length: 232
Alignm identity: 156
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 262-489
Cow position:
Alignm length: 232
Alignm identity: 156
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 30, 57

Conread position: 262-489
Cow position:
Alignm length: 231
Alignm identity: 158
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 41, 21

Conread position: 262-490
Cow position:
Alignm length: 232
Alignm identity: 155
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 30, 47

Conread position: 262-491
Cow position:
Alignm length: 238
Alignm identity: 165
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 30, 54

Conread position: 262-493
Cow position:
Alignm length: 245
Alignm identity: 165
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 262-493
Cow position:
Alignm length: 238
Alignm identity: 159
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 71

Conread position: 262-493
Cow position:
Alignm length: 235
Alignm identity: 161
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 30, 77

Conread position: 262-493
Cow position:
Alignm length: 235
Alignm identity: 159
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 29, 66

Conread position: 262-494
Cow position:
Alignm length: 237
Alignm identity: 157
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 58

Conread position: 263-487
Cow position:
Alignm length: 229
Alignm identity: 155
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 29, 57

Conread position: 264-490
Cow position:
Alignm length: 232
Alignm identity: 157
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 28, 41

Conread position: 268-471
Cow position:
Alignm length: 208
Alignm identity: 144
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 24, 37

Conread position: 270-493
Cow position:
Alignm length: 228
Alignm identity: 156
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 20, 51

Conread position: 287-493
Cow position:
Alignm length: 209
Alignm identity: 141
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 56, 37

Conread position: 289-493
Cow position:
Alignm length: 207
Alignm identity: 142
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 291-489
Cow position:
Alignm length: 199
Alignm identity: 140
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 342-493
Cow position:
Alignm length: 152
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 342-493
Cow position:
Alignm length: 152
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.