Cow genome map

Conread name: rcbe16_h13.y1

Conread position: 1-206
Cow position:
Alignm length: 222
Alignm identity: 161
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 85, 186

Conread position: 1-254
Cow position:
Alignm length: 265
Alignm identity: 184
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 158, 85

Conread position: 1-265
Cow position:
Alignm length: 284
Alignm identity: 206
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 21, 179

Conread position: 1-268
Cow position:
Alignm length: 294
Alignm identity: 222
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 51, 17

Conread position: 1-268
Cow position:
Alignm length: 285
Alignm identity: 208
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 48, 19

Conread position: 1-269
Cow position:
Alignm length: 289
Alignm identity: 207
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 79, 54

Conread position: 1-275
Cow position:
Alignm length: 285
Alignm identity: 206
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 76, 19

Conread position: 1-279
Cow position:
Alignm length: 306
Alignm identity: 218
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 18, 62

Conread position: 1-281
Cow position:
Alignm length: 290
Alignm identity: 198
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 121, 175

Conread position: 1-317
Cow position:
Alignm length: 348
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 175

Conread position: 1-326
Cow position:
Alignm length: 357
Alignm identity: 243
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 106, 77

Conread position: 1-420
Cow position:
Alignm length: 449
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 63

Conread position: 1-435
Cow position:
Alignm length: 467
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 179

Conread position: 1-436
Cow position:
Alignm length: 470
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 177

Conread position: 1-436
Cow position:
Alignm length: 474
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 179

Conread position: 1-436
Cow position:
Alignm length: 457
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 175

Conread position: 1-457
Cow position:
Alignm length: 498
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 154

Conread position: 1-458
Cow position:
Alignm length: 490
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 175

Conread position: 1-460
Cow position:
Alignm length: 498
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 25

Conread position: 1-460
Cow position:
Alignm length: 489
Alignm identity: 330
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 76, 178

Conread position: 1-461
Cow position:
Alignm length: 489
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 175

Conread position: 1-491
Cow position:
Alignm length: 518
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 178

Conread position: 1-493
Cow position:
Alignm length: 539
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 186

Conread position: 1-493
Cow position:
Alignm length: 524
Alignm identity: 344
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 85, 27

Conread position: 1-493
Cow position:
Alignm length: 511
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 183

Conread position: 1-497
Cow position:
Alignm length: 535
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 181

Conread position: 2-268
Cow position:
Alignm length: 283
Alignm identity: 193
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 36, 100

Conread position: 2-268
Cow position:
Alignm length: 279
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 150

Conread position: 2-419
Cow position:
Alignm length: 459
Alignm identity: 312
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 75, 27

Conread position: 3-225
Cow position:
Alignm length: 226
Alignm identity: 177
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 154, 61

Conread position: 3-256
Cow position:
Alignm length: 265
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 172

Conread position: 3-263
Cow position:
Alignm length: 282
Alignm identity: 200
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 74, 85

Conread position: 3-484
Cow position:
Alignm length: 504
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 176

Conread position: 3-485
Cow position:
Alignm length: 505
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 86

Conread position: 3-493
Cow position:
Alignm length: 531
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 176

Conread position: 4-219
Cow position:
Alignm length: 221
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 24

Conread position: 4-271
Cow position:
Alignm length: 290
Alignm identity: 208
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 72, 24

Conread position: 6-491
Cow position:
Alignm length: 512
Alignm identity: 337
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 78, 173

Conread position: 8-256
Cow position:
Alignm length: 262
Alignm identity: 194
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 69, 172

Conread position: 8-497
Cow position:
Alignm length: 523
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 170

Conread position: 9-436
Cow position:
Alignm length: 469
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 169

Conread position: 20-268
Cow position:
Alignm length: 267
Alignm identity: 197
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 57, 159

Conread position: 20-279
Cow position:
Alignm length: 269
Alignm identity: 203
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 57, 89

Conread position: 23-493
Cow position:
Alignm length: 493
Alignm identity: 327
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 57, 156

Conread position: 29-274
Cow position:
Alignm length: 269
Alignm identity: 185
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 51, 155

Conread position: 39-493
Cow position:
Alignm length: 474
Alignm identity: 315
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 22, 50

Conread position: 41-493
Cow position:
Alignm length: 476
Alignm identity: 320
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 35, 108

Conread position: 45-493
Cow position:
Alignm length: 476
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 134

Conread position: 47-268
Cow position:
Alignm length: 238
Alignm identity: 179
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 30, 85

Conread position: 51-268
Cow position:
Alignm length: 235
Alignm identity: 166
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 26, 126

Conread position: 56-233
Cow position:
Alignm length: 187
Alignm identity: 142
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 21, 124

Conread position: 56-263
Cow position:
Alignm length: 227
Alignm identity: 170
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 21, 122

Conread position: 56-493
Cow position:
Alignm length: 467
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 20

Conread position: 57-260
Cow position:
Alignm length: 219
Alignm identity: 167
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 50, 11

Conread position: 61-220
Cow position:
Alignm length: 168
Alignm identity: 132
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 17, 91

Conread position: 63-268
Cow position:
Alignm length: 225
Alignm identity: 174
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 14, 115

Conread position: 81-273
Cow position:
Alignm length: 212
Alignm identity: 155
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 91

Conread position: 84-417
Cow position:
Alignm length: 360
Alignm identity: 250
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 71, 90

Conread position: 85-436
Cow position:
Alignm length: 382
Alignm identity: 271
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 60, 90

Conread position: 85-475
Cow position:
Alignm length: 426
Alignm identity: 296
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 20, 91

Conread position: 85-488
Cow position:
Alignm length: 443
Alignm identity: 303
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 20, 93

Conread position: 93-263
Cow position:
Alignm length: 186
Alignm identity: 138
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 63, 19

Conread position: 94-322
Cow position:
Alignm length: 247
Alignm identity: 176
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 16, 68

Conread position: 96-491
Cow position:
Alignm length: 424
Alignm identity: 286
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 61, 78

Conread position: 99-463
Cow position:
Alignm length: 382
Alignm identity: 258
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 48, 74

Conread position: 100-265
Cow position:
Alignm length: 183
Alignm identity: 138
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 22, 76

Conread position: 100-270
Cow position:
Alignm length: 182
Alignm identity: 147
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 51, 74

Conread position: 100-436
Cow position:
Alignm length: 364
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 74

Conread position: 109-334
Cow position:
Alignm length: 233
Alignm identity: 164
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 48, 65

Conread position: 109-486
Cow position:
Alignm length: 389
Alignm identity: 252
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 48, 65

Conread position: 109-487
Cow position:
Alignm length: 399
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 67

Conread position: 109-493
Cow position:
Alignm length: 394
Alignm identity: 256
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 13, 66

Conread position: 110-478
Cow position:
Alignm length: 387
Alignm identity: 257
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 110, 45

Conread position: 111-491
Cow position:
Alignm length: 404
Alignm identity: 265
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 46, 36

Conread position: 112-254
Cow position:
Alignm length: 152
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 35

Conread position: 112-268
Cow position:
Alignm length: 160
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 62

Conread position: 117-493
Cow position:
Alignm length: 395
Alignm identity: 258
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 40, 29

Conread position: 118-235
Cow position:
Alignm length: 122
Alignm identity: 101
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 39, 56

Conread position: 118-255
Cow position:
Alignm length: 144
Alignm identity: 118
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 39, 29

Conread position: 118-461
Cow position:
Alignm length: 377
Alignm identity: 224
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 38, 56

Conread position: 120-275
Cow position:
Alignm length: 167
Alignm identity: 128
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 37, 27

Conread position: 121-493
Cow position:
Alignm length: 396
Alignm identity: 274
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 36, 48

Conread position: 122-290
Cow position:
Alignm length: 175
Alignm identity: 137
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 82, 30

Conread position: 122-491
Cow position:
Alignm length: 406
Alignm identity: 275
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 30, 51

Conread position: 125-263
Cow position:
Alignm length: 146
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 32, 49

Conread position: 140-485
Cow position:
Alignm length: 366
Alignm identity: 250
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 64, 11

Conread position: 143-490
Cow position:
Alignm length: 368
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 31

Conread position: 173-493
Cow position:
Alignm length: 342
Alignm identity: 221
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 40, 150

Conread position: 221-490
Cow position:
Alignm length: 274
Alignm identity: 184
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 53, 43

Conread position: 234-497
Cow position:
Alignm length: 271
Alignm identity: 183
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 45, 87

Conread position: 258-493
Cow position:
Alignm length: 241
Alignm identity: 162
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 21, 83

Conread position: 262-465
Cow position:
Alignm length: 211
Alignm identity: 148
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 30, 43

Conread position: 262-480
Cow position:
Alignm length: 222
Alignm identity: 155
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 30, 58

Conread position: 262-486
Cow position:
Alignm length: 230
Alignm identity: 157
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 30, 51

Conread position: 262-491
Cow position:
Alignm length: 234
Alignm identity: 158
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 29, 44

Conread position: 262-491
Cow position:
Alignm length: 238
Alignm identity: 164
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 78, 30

Conread position: 262-492
Cow position:
Alignm length: 235
Alignm identity: 158
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 30, 67

Conread position: 262-493
Cow position:
Alignm length: 233
Alignm identity: 153
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 83, 23

Conread position: 262-493
Cow position:
Alignm length: 234
Alignm identity: 161
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 118, 63

Conread position: 262-493
Cow position:
Alignm length: 240
Alignm identity: 164
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 30, 17

Conread position: 262-497
Cow position:
Alignm length: 239
Alignm identity: 163
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 30, 72

Conread position: 313-491
Cow position:
Alignm length: 180
Alignm identity: 128
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 28, 13

Show alignments to all cow chromosomes.