Cow genome map

Conread name: rcbe16_h13.y1

Conread position: 1-205
Cow position:
Alignm length: 210
Alignm identity: 158
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 73, 11

Conread position: 1-240
Cow position:
Alignm length: 244
Alignm identity: 185
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 146, 40

Conread position: 1-249
Cow position:
Alignm length: 258
Alignm identity: 194
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 79, 178

Conread position: 1-253
Cow position:
Alignm length: 274
Alignm identity: 198
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 100, 76

Conread position: 1-253
Cow position:
Alignm length: 263
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 180

Conread position: 1-262
Cow position:
Alignm length: 273
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 175

Conread position: 1-264
Cow position:
Alignm length: 284
Alignm identity: 205
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 79, 179

Conread position: 1-264
Cow position:
Alignm length: 282
Alignm identity: 192
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 79, 177

Conread position: 1-268
Cow position:
Alignm length: 277
Alignm identity: 205
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 76, 45

Conread position: 1-268
Cow position:
Alignm length: 294
Alignm identity: 204
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 81, 181

Conread position: 1-268
Cow position:
Alignm length: 277
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 178

Conread position: 1-268
Cow position:
Alignm length: 275
Alignm identity: 202
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 162, 34

Conread position: 1-268
Cow position:
Alignm length: 278
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 178

Conread position: 1-268
Cow position:
Alignm length: 281
Alignm identity: 207
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 18, 176

Conread position: 1-269
Cow position:
Alignm length: 278
Alignm identity: 204
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 79, 151

Conread position: 1-279
Cow position:
Alignm length: 291
Alignm identity: 215
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 113, 44

Conread position: 1-279
Cow position:
Alignm length: 301
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 178

Conread position: 1-314
Cow position:
Alignm length: 338
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 41

Conread position: 1-314
Cow position:
Alignm length: 334
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 151

Conread position: 1-436
Cow position:
Alignm length: 469
Alignm identity: 321
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 53, 163

Conread position: 1-436
Cow position:
Alignm length: 462
Alignm identity: 307
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 71, 181

Conread position: 1-461
Cow position:
Alignm length: 479
Alignm identity: 309
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 156, 74

Conread position: 1-476
Cow position:
Alignm length: 514
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 176

Conread position: 1-480
Cow position:
Alignm length: 493
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 148

Conread position: 1-485
Cow position:
Alignm length: 513
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 12

Conread position: 1-486
Cow position:
Alignm length: 522
Alignm identity: 351
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 83, 11

Conread position: 1-486
Cow position:
Alignm length: 522
Alignm identity: 351
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 76, 103

Conread position: 1-486
Cow position:
Alignm length: 535
Alignm identity: 357
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 76, 165

Conread position: 1-489
Cow position:
Alignm length: 514
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 12

Conread position: 1-489
Cow position:
Alignm length: 524
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 114

Conread position: 1-491
Cow position:
Alignm length: 505
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 178

Conread position: 1-491
Cow position:
Alignm length: 521
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 180

Conread position: 1-491
Cow position:
Alignm length: 508
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 80

Conread position: 1-491
Cow position:
Alignm length: 513
Alignm identity: 336
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 76, 111

Conread position: 1-491
Cow position:
Alignm length: 531
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 179

Conread position: 1-493
Cow position:
Alignm length: 527
Alignm identity: 355
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 77, 109

Conread position: 1-493
Cow position:
Alignm length: 518
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 38

Conread position: 1-497
Cow position:
Alignm length: 523
Alignm identity: 346
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 25, 49

Conread position: 2-268
Cow position:
Alignm length: 285
Alignm identity: 208
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 75, 137

Conread position: 2-436
Cow position:
Alignm length: 474
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 177

Conread position: 2-458
Cow position:
Alignm length: 490
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 179

Conread position: 2-491
Cow position:
Alignm length: 509
Alignm identity: 332
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 75, 120

Conread position: 3-233
Cow position:
Alignm length: 239
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 176

Conread position: 3-279
Cow position:
Alignm length: 295
Alignm identity: 211
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 74, 117

Conread position: 3-333
Cow position:
Alignm length: 363
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 180

Conread position: 3-475
Cow position:
Alignm length: 505
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 176

Conread position: 3-489
Cow position:
Alignm length: 510
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 174

Conread position: 3-497
Cow position:
Alignm length: 523
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 91

Conread position: 4-306
Cow position:
Alignm length: 324
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 19

Conread position: 4-487
Cow position:
Alignm length: 527
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 177

Conread position: 5-210
Cow position:
Alignm length: 211
Alignm identity: 164
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 72, 155

Conread position: 5-433
Cow position:
Alignm length: 459
Alignm identity: 312
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 73, 167

Conread position: 5-436
Cow position:
Alignm length: 452
Alignm identity: 298
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 75, 175

Conread position: 5-436
Cow position:
Alignm length: 455
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 106

Conread position: 7-220
Cow position:
Alignm length: 220
Alignm identity: 164
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 100, 21

Conread position: 7-457
Cow position:
Alignm length: 485
Alignm identity: 324
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 75, 7

Conread position: 8-260
Cow position:
Alignm length: 274
Alignm identity: 206
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 67, 172

Conread position: 8-268
Cow position:
Alignm length: 278
Alignm identity: 194
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 76, 101

Conread position: 8-471
Cow position:
Alignm length: 489
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 172

Conread position: 8-478
Cow position:
Alignm length: 511
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 168

Conread position: 9-268
Cow position:
Alignm length: 281
Alignm identity: 211
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 71, 175

Conread position: 13-220
Cow position:
Alignm length: 222
Alignm identity: 157
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 64, 30

Conread position: 13-493
Cow position:
Alignm length: 516
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 102

Conread position: 23-263
Cow position:
Alignm length: 261
Alignm identity: 193
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 54, 128

Conread position: 24-471
Cow position:
Alignm length: 469
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 9

Conread position: 37-262
Cow position:
Alignm length: 239
Alignm identity: 175
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 47, 73

Conread position: 41-268
Cow position:
Alignm length: 243
Alignm identity: 183
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 35, 139

Conread position: 55-262
Cow position:
Alignm length: 218
Alignm identity: 162
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 22, 96

Conread position: 56-257
Cow position:
Alignm length: 218
Alignm identity: 167
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 24, 96

Conread position: 60-220
Cow position:
Alignm length: 169
Alignm identity: 134
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 24, 119

Conread position: 63-268
Cow position:
Alignm length: 222
Alignm identity: 165
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 21, 115

Conread position: 75-491
Cow position:
Alignm length: 436
Alignm identity: 291
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 25, 102

Conread position: 75-493
Cow position:
Alignm length: 450
Alignm identity: 297
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 29, 101

Conread position: 83-268
Cow position:
Alignm length: 209
Alignm identity: 156
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 22, 102

Conread position: 83-290
Cow position:
Alignm length: 220
Alignm identity: 171
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 24, 93

Conread position: 84-249
Cow position:
Alignm length: 171
Alignm identity: 139
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 73, 90

Conread position: 85-255
Cow position:
Alignm length: 179
Alignm identity: 133
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 73, 12

Conread position: 85-263
Cow position:
Alignm length: 194
Alignm identity: 149
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 19, 33

Conread position: 85-483
Cow position:
Alignm length: 428
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 89

Conread position: 85-486
Cow position:
Alignm length: 429
Alignm identity: 289
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 20, 89

Conread position: 86-486
Cow position:
Alignm length: 432
Alignm identity: 296
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 71, 88

Conread position: 91-279
Cow position:
Alignm length: 207
Alignm identity: 158
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 13, 86

Conread position: 92-489
Cow position:
Alignm length: 429
Alignm identity: 288
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 14, 132

Conread position: 93-270
Cow position:
Alignm length: 193
Alignm identity: 147
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 65, 16

Conread position: 97-489
Cow position:
Alignm length: 416
Alignm identity: 268
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 59, 18

Conread position: 97-490
Cow position:
Alignm length: 422
Alignm identity: 274
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 5, 13

Conread position: 99-267
Cow position:
Alignm length: 177
Alignm identity: 133
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 58, 76

Conread position: 99-489
Cow position:
Alignm length: 427
Alignm identity: 295
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 58, 75

Conread position: 100-249
Cow position:
Alignm length: 155
Alignm identity: 126
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 57, 76

Conread position: 100-256
Cow position:
Alignm length: 172
Alignm identity: 132
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 57, 74

Conread position: 100-376
Cow position:
Alignm length: 298
Alignm identity: 222
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 58, 47

Conread position: 100-486
Cow position:
Alignm length: 414
Alignm identity: 285
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 57, 75

Conread position: 104-247
Cow position:
Alignm length: 151
Alignm identity: 122
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 52, 11

Conread position: 109-256
Cow position:
Alignm length: 163
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 48, 38

Conread position: 109-268
Cow position:
Alignm length: 165
Alignm identity: 127
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 39, 65

Conread position: 109-314
Cow position:
Alignm length: 229
Alignm identity: 165
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 112, 46

Conread position: 109-485
Cow position:
Alignm length: 391
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 64

Conread position: 109-489
Cow position:
Alignm length: 410
Alignm identity: 285
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 39, 67

Conread position: 109-493
Cow position:
Alignm length: 401
Alignm identity: 269
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 48, 65

Conread position: 110-268
Cow position:
Alignm length: 162
Alignm identity: 129
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 46, 62

Conread position: 112-454
Cow position:
Alignm length: 358
Alignm identity: 243
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 42, 7

Conread position: 112-493
Cow position:
Alignm length: 404
Alignm identity: 266
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 30, 63

Conread position: 116-249
Cow position:
Alignm length: 144
Alignm identity: 117
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 41, 31

Conread position: 117-490
Cow position:
Alignm length: 405
Alignm identity: 267
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 40, 57

Conread position: 118-255
Cow position:
Alignm length: 147
Alignm identity: 117
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 38, 29

Conread position: 118-328
Cow position:
Alignm length: 233
Alignm identity: 171
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 40, 57

Conread position: 118-491
Cow position:
Alignm length: 396
Alignm identity: 261
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 95, 34

Conread position: 122-281
Cow position:
Alignm length: 167
Alignm identity: 130
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 35, 55

Conread position: 125-256
Cow position:
Alignm length: 143
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 32, 46

Conread position: 127-268
Cow position:
Alignm length: 154
Alignm identity: 119
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 19, 48

Conread position: 128-484
Cow position:
Alignm length: 378
Alignm identity: 247
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 28, 46

Conread position: 129-263
Cow position:
Alignm length: 140
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 28, 45

Conread position: 130-491
Cow position:
Alignm length: 385
Alignm identity: 257
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 27, 17

Conread position: 133-260
Cow position:
Alignm length: 132
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 21, 39

Conread position: 138-326
Cow position:
Alignm length: 207
Alignm identity: 152
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 36

Conread position: 143-489
Cow position:
Alignm length: 355
Alignm identity: 231
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 68, 29

Conread position: 143-492
Cow position:
Alignm length: 379
Alignm identity: 255
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 14, 31

Conread position: 144-491
Cow position:
Alignm length: 384
Alignm identity: 258
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 13, 30

Conread position: 153-492
Cow position:
Alignm length: 342
Alignm identity: 233
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 58, 15

Conread position: 245-497
Cow position:
Alignm length: 260
Alignm identity: 173
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 42, 66

Conread position: 262-489
Cow position:
Alignm length: 229
Alignm identity: 152
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 83, 55

Conread position: 262-491
Cow position:
Alignm length: 236
Alignm identity: 159
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 30, 19

Conread position: 262-491
Cow position:
Alignm length: 234
Alignm identity: 161
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 30, 60

Conread position: 262-493
Cow position:
Alignm length: 237
Alignm identity: 161
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 30, 210

Conread position: 262-493
Cow position:
Alignm length: 236
Alignm identity: 165
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 30, 49

Conread position: 262-493
Cow position:
Alignm length: 233
Alignm identity: 157
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 80, 25

Conread position: 262-493
Cow position:
Alignm length: 237
Alignm identity: 167
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 30, 12

Conread position: 262-493
Cow position:
Alignm length: 237
Alignm identity: 167
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 28, 180

Conread position: 262-493
Cow position:
Alignm length: 235
Alignm identity: 163
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 30, 83

Conread position: 262-497
Cow position:
Alignm length: 239
Alignm identity: 158
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 66

Show alignments to all cow chromosomes.